CF510080
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF510080 vs. ExPASy Swiss-Prot
Match: LOXC1_ORYSJ (Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 8.000e-25 Identity = 60/124 (48.39%), Postives = 79/124 (63.71%), Query Frame = 3 Query: 360 VSAELDPKTGLDKSTIQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVL---DGLPNGPV-NVTCNSWLHSK----HDNKQKRVFFTNKLYLPSQTPDGLKRYRAEE 707 VS+ELD KTG +K+T++ YA + D + YE++F+VPSGFG IGAI+V NE +EM+L+DI L DG N V + CNSW+ K KR+FF NK YLP QTP GL+ YR + Sbjct: 119 VSSELDAKTGKEKATVRSYAHNVDDDDHSVVTYEADFDVPSGFGPIGAIIVTNELRQEMFLEDINLTASDGAGNSTVLPIRCNSWVQPKSVGDEGTPSKRIFFANKTYLPGQTPAGLRSYRKND 242
BLAST of CF510080 vs. ExPASy Swiss-Prot
Match: LOX23_HORVU (Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.390e-23 Identity = 53/118 (44.92%), Postives = 77/118 (65.25%), Query Frame = 3 Query: 360 VSAELDPKTGLDKSTIQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDI--VLDGLPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEE 707 VS+ELDPKTG ++ ++ +A +G YE++ VP+ FG +GA+LVENEHH+EM++KDI + G + + SW+HSK D+ + R FFT K YLPSQTP G++ R +E Sbjct: 106 VSSELDPKTGRERERVKGFAHMTLKEGT----YEAKMSVPASFGPVGAVLVENEHHREMFIKDIKLITGGDESTAITFDVASWVHSKFDDPEPRAFFTVKSYLPSQTPPGIEALRKKE 219
BLAST of CF510080 vs. ExPASy Swiss-Prot
Match: LOXC2_ORYSJ (Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX2 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.668e-22 Identity = 58/124 (46.77%), Postives = 80/124 (64.52%), Query Frame = 3 Query: 360 VSAELDPKTGLDKSTIQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVL---DGLPNGPV-NVTCNSWLHSKHDNKQ----KRVFFTNKLYLPSQTPDGLKRYRAEE 707 VS+EL+ KTG K+T+ YA K+ D G + YE++F+VP+GFG IGA++V NE +EM+L+D+ L DG N V + CNSW+ K + KR+FF K YLP QTP GL+ YR E+ Sbjct: 137 VSSELEAKTGKKKATVHSYAHKVDDDDHGVVTYEADFDVPTGFGPIGAVVVTNELGQEMFLEDLNLTAGDGAGNSTVLPIRCNSWVQPKSSIDEGTPGKRIFFA-KAYLPGQTPAGLRSYREED 259
BLAST of CF510080 vs. ExPASy Swiss-Prot
Match: LOX3_ARATH (Lipoxygenase 3, chloroplastic OS=Arabidopsis thaliana GN=LOX3 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.179e-22 Identity = 51/120 (42.50%), Postives = 78/120 (65.00%), Query Frame = 3 Query: 360 VSAELDPKTGLDKST----IQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEE 707 +S +LDPKT L K + ++D+++K + + Y +EF V + FG GAI V N+H KE +L+ I ++G GPV+ CNSW+ S+ D+ KR+FFTN+ YLP++TP GL+ R +E Sbjct: 124 ISTQLDPKTKLPKKSNAAVLKDWSKKSKTKAE-RVHYTAEFTVDAAFGSPGAITVMNKHQKEFFLESITIEGFALGPVHFPCNSWVQSQKDHPDKRIFFTNQPYLPNETPSGLRVLREKE 242
BLAST of CF510080 vs. ExPASy Swiss-Prot
Match: LOX2_ARATH (Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana GN=LOX2 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.179e-22 Identity = 50/116 (43.10%), Postives = 79/116 (68.10%), Query Frame = 3 Query: 360 VSAELDPKTGLDKSTIQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEE 707 +SA+ D + T++DYA+++ A+ +YE EFE+P FG +GAI ++N++H++++LK + L LP G + TC SW+ K + KR+FF++K YLPSQTP+ LK+YR EE Sbjct: 111 ISAKTDQRI-----TVEDYAQRVWAEAPDE-KYECEFEMPEDFGPVGAIKIQNQYHRQLFLKGVELK-LPGGSITFTCESWVAPKSVDPTKRIFFSDKSYLPSQTPEPLKKYRKEE 219
BLAST of CF510080 vs. ExPASy Swiss-Prot
Match: LOX6_ORYSJ (Probable lipoxygenase 6 OS=Oryza sativa subsp. japonica GN=Os03g0179900 PE=2 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 4.854e-22 Identity = 55/122 (45.08%), Postives = 81/122 (66.39%), Query Frame = 3 Query: 360 VSAELDPKTGLD----KSTIQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDG--LPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEE 707 +S ++ P+T + +I+D+ +K GA GD ++ Y +EF V + FGE GAI V N H++E +L+ IV++G LP GPV+ CNSW+ S + KRVFF+NK YLPS+TP GL+ R +E Sbjct: 118 ISTKIHPRTKKPMQSGRVSIKDWCQKRGAKGD-HVVYTAEFTVDADFGEPGAIAVANRHNREFFLESIVVEGGGLPCGPVHFACNSWVQSTRELPTKRVFFSNKPYLPSETPPGLRELREKE 238
BLAST of CF510080 vs. ExPASy Swiss-Prot
Match: LOX4_ARATH (Lipoxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=LOX4 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.339e-22 Identity = 50/120 (41.67%), Postives = 77/120 (64.17%), Query Frame = 3 Query: 360 VSAELDPKTGLDKST----IQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEE 707 +S ++DPKT K + ++D+++K + + + Y +EF V S FG GAI V N+H KE +L+ I ++G GPV+ CNSW+ S+ D+ KR+ FTN+ YLPS+TP GL+ R +E Sbjct: 130 MSTQVDPKTNEPKKSKAAVLKDWSKKSNSKAE-RVHYTAEFTVDSAFGSPGAITVTNKHQKEFFLESITIEGFACGPVHFPCNSWVQSQKDHPSKRILFTNQPYLPSETPSGLRTLREKE 248
BLAST of CF510080 vs. ExPASy Swiss-Prot
Match: LOX5_ORYSJ (Putative lipoxygenase 5 OS=Oryza sativa subsp. japonica GN=Os04g0447100 PE=3 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 7.008e-21 Identity = 50/120 (41.67%), Postives = 72/120 (60.00%), Query Frame = 3 Query: 360 VSAELDPKTGLDK----STIQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEE 707 VS E DP+ G K S + + K + + Y +EF V +GFGE GA+ V N H +E Y++ IV++G P GP + TCNSW+ ++ +RVFF+N+ YLPS+TP GL+ R E Sbjct: 106 VSTETDPRKGTPKKSKPSALVGWFDKKDVKAE-RVVYTAEFAVDAGFGEPGAVTVLNRHQREFYIESIVVEGFPTGPAHFTCNSWVQPTRVSRDRRVFFSNRPYLPSETPPGLRELRLRE 224
BLAST of CF510080 vs. ExPASy Swiss-Prot
Match: LOX21_HORVU (Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare GN=LOX2.1 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.119e-18 Identity = 51/118 (43.22%), Postives = 64/118 (54.24%), Query Frame = 3 Query: 360 VSAELDPKTGLDKSTIQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVL--DGLPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEE 707 VS+ELDP+TG ++ I + G D YE+ F+VP+ FG IGA+ V N HH EM L DI + G V C SW+ H KRVFF YLPSQTP G++ R E Sbjct: 120 VSSELDPQTGQEREPISGAVKHSGRVDDEWDMYEATFKVPASFGPIGAVQVTNYHHSEMLLGDIEVFPTGQEESAVTFHCKSWIDPSHCTPDKRVFFPAHSYLPSQTPKGVEGLRKRE 237
BLAST of CF510080 vs. ExPASy Swiss-Prot
Match: LOX4_SOYBN (Lipoxygenase-4 OS=Glycine max GN=LOX1.5 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.158e-15 Identity = 39/91 (42.86%), Postives = 55/91 (60.44%), Query Frame = 3 Query: 438 GDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSQTPDGLKRYRAEE 707 G G Y+ FE S FG GA ++N E YLK ++L+ +PN G ++ CNSW+++ + K R+FF N YLPS+TP L +YR EE Sbjct: 89 GAGEQAYDVNFEWDSDFGIPGAFYIKNFMQNEFYLKSLILEDIPNHGTIHFVCNSWVYNSKNYKTDRIFFANNTYLPSETPAPLLKYREEE 179 The following BLAST results are available for this feature:
BLAST of CF510080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
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Sequences
The
following sequences are available for this feature:
EST sequence >CF510080 ID=CF510080; Name=CF510080; organism=Citrus sinensis; type=EST; length=708bpback to top |