CF510089

Overview
NameCF510089
Unique NameCF510089
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length541
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13256 contig Csv1_Contig13256:536..1075. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CF510089 vs. ExPASy Swiss-Prot
Match: IP5P1_ARATH (Type I inositol-1,4,5-trisphosphate 5-phosphatase 1 OS=Arabidopsis thaliana GN=IP5P1 PE=1 SV=2)

HSP 1 Score: 57.3806 bits (137), Expect = 2.197e-14
Identity = 26/31 (83.87%), Postives = 27/31 (87.10%), Query Frame = 2 
Query:    5 WIDMNEPADIYVLGLQEIVPLTAGNIFGAED 97
            W+D  EPADIYVLGLQEIVPL AGNIFG ED
Sbjct:  128 WLDTLEPADIYVLGLQEIVPLNAGNIFGMED 158

HSP 2 Score: 40.817 bits (94), Expect = 2.197e-14
Identity = 30/133 (22.56%), Postives = 52/133 (39.10%), Query Frame = 3 
Query:  102 RPVSKWENIIRDTLNRIRHTTGRVXXXXXXXXXXXXXXXXXXXXXXXXXTHESDSDVGEEVYPLDDENNGFDEVNDKPV---KMFTNYEVSACADSAKLDMPAENNLQRHFSSPKRFDRLYCLRMEESKGNVE 491
            +P  +WEN+IRD LNR++    ++                           E+  D  + +  +D++ N   E  D P+      TN +V    +     +P +  LQR FS+P   DR   +++       E
Sbjct:  160 QPALEWENLIRDALNRVQPRKLKIKSHSDPPSPSKFKQPEEVPYSVEDMFVETSHDACDGISSMDNKLNSV-ESTDVPIVSEDSLTNIDVLGSTNDNASCLPIQEYLQRQFSTPNTPDRSLSMQINSDSKREE 291
The following BLAST results are available for this feature:
BLAST of CF510089 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
IP5P1_ARATH2.197e-1483.87Type I inositol-1,4,5-trisphosphate 5-phosphatase ... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-604 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-84_H10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510089 ID=CF510089; Name=CF510089; organism=Citrus sinensis; type=EST; length=541bp
TGATTGGATAGATATGAATGAGCCTGCTGACATCTATGTGCTTGGTCTTC
AGGAGATTGTACCATTAACCGCTGGGAATATCTTTGGAGCTGAAGATAGC
CCGTCCTGTTTCAAAGTGGGAAAATATTATTCGTGACACCCTAAACAGAA
TTCGGCATACCACCGGCAGGGTTAAATCTCTTAGTGATCCCCCATCTCCA
TCCAAGTTTAAGCCATCCGAGGATATTCCAGATATAGAAGAGGAGATAAC
CCATGAAAGTGATAGTGATGTAGGTGAGGAAGTTTATCCGCTGGATGATG
AAAATAACGGTTTCGATGAAGTCAATGATAAACCAGTCAAGATGTTCACG
AATTATGAAGTTTCAGCCTGTGCTGATAGTGCCAAACTAGACATGCCAGC
AGAAAATAATTTACAGAGGCATTTTTCTTCTCCAAAGAGGTTTGATAGGT
TATATTGCCTCCGAATGGAAGAGAGTAAGGGAAATGTTGAAGCACCAGCT
GTGCAATACAATGGCCGATTAACTAAAATGCTTAGTGGGTC
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