CF510149

Overview
NameCF510149
Unique NameCF510149
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length342
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13631 contig Csv1_Contig13631:78..419. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF510149 vs. ExPASy Swiss-Prot
Match: PPP5_SOLLC (Serine/threonine-protein phosphatase 5 OS=Solanum lycopersicum GN=PP5 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.778e-12
Identity = 34/88 (38.64%), Postives = 56/88 (63.64%), Query Frame = 2
Query:   53 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETA 316
            A +L++ A EAF    +  A DLY+QAIE++  +A  +A+RA A  KL+ +  A+ D  RAIE++P  SK Y+R+  A + + +++ A
Sbjct:   14 AEELKQLANEAFKGHKYSQAIDLYTQAIELNGENAVYYANRAFAHTKLEEYGSAIQDGTRAIEIDPRYSKGYYRRGAAYLAMGKFKDA 101          
BLAST of CF510149 vs. ExPASy Swiss-Prot
Match: SUGT1_DICDI (Protein SUGT1 homolog OS=Dictyostelium discoideum GN=sugt1 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.554e-11
Identity = 34/90 (37.78%), Postives = 52/90 (57.78%), Query Frame = 2
Query:   68 KKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETAKVALEKG 337
            K+    F+D+ ++ A   Y +A     N+AE F  R+Q   KL N  EA++D N +I+L+ + SK Y +K   C +LEE++TA    EKG
Sbjct:    5 KEGNSYFVDEQYDEALKCYDKACLELSNNAEAFFKRSQCHSKLSNLKEALSDINTSIKLDSNNSKYYLKKGQLCFELEEFDTALKTFEKG 94          
BLAST of CF510149 vs. ExPASy Swiss-Prot
Match: PPP5_ARATH (Serine/threonine-protein phosphatase 5 OS=Arabidopsis thaliana GN=PAPP5 PE=1 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.431e-11
Identity = 32/88 (36.36%), Postives = 57/88 (64.77%), Query Frame = 2
Query:   53 ATDLEKKAKEAFIDDYFELAYDLYSQAIEISPNSAELFADRAQASIKLQNFTEAVADANRAIELEPSMSKAYWRKATACMKLEEYETA 316
            A + + +A EAF    +  A DLY++AIE++ N+A  +A+RA A  KL+ +  A+ DA++AIE++   SK Y+R+  A + + +++ A
Sbjct:   13 AEEFKSQANEAFKGHKYSSAIDLYTKAIELNSNNAVYWANRAFAHTKLEEYGSAIQDASKAIEVDSRYSKGYYRRGAAYLAMGKFKDA 100          
The following BLAST results are available for this feature:
BLAST of CF510149 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
PPP5_SOLLC8.778e-1238.64Serine/threonine-protein phosphatase 5 OS=Solanum ... [more]
SUGT1_DICDI2.554e-1137.78Protein SUGT1 homolog OS=Dictyostelium discoideum ... [more]
PPP5_ARATH7.431e-1136.36Serine/threonine-protein phosphatase 5 OS=Arabidop... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-664 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-8_G03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510149 ID=CF510149; Name=CF510149; organism=Citrus sinensis; type=EST; length=342bp
GTTGTTCTCTTTCTTTCTGGACTCTTCGATTAGCCAACTGTAGTCTCTAA
TGGCAACCGATCTGGAGAAGAAAGCCAAAGAGGCGTTCATCGACGACTAC
TTCGAGCTCGCCTACGATCTCTACTCGCAAGCCATTGAGATTAGCCCTAA
TAGCGCTGAGCTCTTCGCCGACCGCGCTCAAGCCAGCATCAAACTCCAAA
ATTTCACTGAGGCTGTTGCGGATGCGAACCGAGCAATTGAGTTGGAGCCT
TCAATGTCTAAAGCCTATTGGCGTAAAGCCACCGCTTGCATGAAGCTTGA
AGAATATGAAACGGCTAAGGTGGCACTAGAAAAAGGTGCTTC
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