CF510155

Overview
NameCF510155
Unique NameCF510155
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length518
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig800 contig Csv1_Contig800:29..546. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF510155 vs. ExPASy Swiss-Prot
Match: PEAM1_ARATH (Phosphoethanolamine N-methyltransferase 1 OS=Arabidopsis thaliana GN=NMT1 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 8.160e-37
Identity = 74/84 (88.10%), Postives = 82/84 (97.62%), Query Frame = 1 
Query:  265 EREIQKNYWMEHSANLTVEAMMLDSKASDLDKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKN 516
            ER+IQKNYW+EHSA+LTVEAMMLDS+ASDLDKEERPEVLSLLPPYEGK+VLE GAGIGRFTGELA+KAG +IALDFID+VIKKN
Sbjct:    8 ERDIQKNYWIEHSADLTVEAMMLDSRASDLDKEERPEVLSLLPPYEGKSVLELGAGIGRFTGELAQKAGELIALDFIDNVIKKN 91
[Close]
BLAST of CF510155 vs. ExPASy Swiss-Prot
Match: PEAM3_ARATH (Putative phosphoethanolamine N-methyltransferase 3 OS=Arabidopsis thaliana GN=NMT3 PE=2 SV=2)

HSP 1 Score: 142.895 bits (359), Expect = 8.444e-34
Identity = 70/84 (83.33%), Postives = 76/84 (90.48%), Query Frame = 1 
Query:  265 EREIQKNYWMEHSANLTVEAMMLDSKASDLDKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKN 516
            EREIQKNYW EHS  L+VEAMMLDSKASDLDKEERPE+L+ LPP EG TVLEFGAGIGRFT ELA+KAG VIA+DFI+SVIKKN
Sbjct:    7 EREIQKNYWKEHSVGLSVEAMMLDSKASDLDKEERPEILAFLPPIEGTTVLEFGAGIGRFTTELAQKAGQVIAVDFIESVIKKN 90
[Close]
BLAST of CF510155 vs. ExPASy Swiss-Prot
Match: PEAMT_SPIOL (Phosphoethanolamine N-methyltransferase OS=Spinacia oleracea GN=PEAMT PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 2.457e-33
Identity = 69/84 (82.14%), Postives = 77/84 (91.67%), Query Frame = 1 
Query:  265 EREIQKNYWMEHSANLTVEAMMLDSKASDLDKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKN 516
            ERE+ K YW+EHS +LTVEAMMLDS+ASDLDK ERPEVLS+LPPYEGK+VLE GAGIGRFTGELA+KA  VIALDFI+SVIKKN
Sbjct:   11 EREVFKKYWIEHSVDLTVEAMMLDSQASDLDKVERPEVLSMLPPYEGKSVLELGAGIGRFTGELAEKASQVIALDFIESVIKKN 94
[Close]
BLAST of CF510155 vs. ExPASy Swiss-Prot
Match: PEAM2_ARATH (Putative phosphoethanolamine N-methyltransferase 2 OS=Arabidopsis thaliana GN=NMT2 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.490e-30
Identity = 65/75 (86.67%), Postives = 72/75 (96.00%), Query Frame = 1 
Query:  292 MEHSANLTVEAMMLDSKASDLDKEERPEVLSLLPPYEGKTVLEFGAGIGRFTGELAKKAGHVIALDFIDSVIKKN 516
            MEHS++LTVEAMMLDSKASDLDKEERPEVLSL+PPYEGK+VLE GAGIGRFTGELA+KAG VIALDFI+S I+KN
Sbjct:    1 MEHSSDLTVEAMMLDSKASDLDKEERPEVLSLIPPYEGKSVLELGAGIGRFTGELAQKAGEVIALDFIESAIQKN 75
The following BLAST results are available for this feature:
BLAST of CF510155 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
PEAM1_ARATH8.160e-3788.10Phosphoethanolamine N-methyltransferase 1 OS=Arabi... [more]
PEAM3_ARATH8.444e-3483.33Putative phosphoethanolamine N-methyltransferase 3... [more]
PEAMT_SPIOL2.457e-3382.14Phosphoethanolamine N-methyltransferase OS=Spinaci... [more]
PEAM2_ARATH1.490e-3086.67Putative phosphoethanolamine N-methyltransferase 2... [more]
back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-670 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-8_G10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF510155 ID=CF510155; Name=CF510155; organism=Citrus sinensis; type=EST; length=518bp
AGTTGCATTTGCATTTGCATTTGCATTTGGGTTTGCATTTTGCATGCAGC
AGAGAGGGAGAGAATACAATTATAGGTCGAGGAGTTTCTCAAGAGCCCGA
GTTGCTGTTGAGGGCTTTTAGTTTAAGCCTTCTCTCAAAGAATCTCTCGG
ATCTCTATTAATTTTCTTTCACAGCTAATTAAAATACTCTACTCCTCCCT
TTGAATCCTCTTGTTCTAAGAACCTTTGCTTGTCTCAACGATGGGTACTC
AAAGTAATCATGGTGAACGTGAGATCCAAAAGAACTACTGGATGGAACAC
TCGGCGAATTTAACAGTGGAGGCTATGATGCTCGACTCCAAAGCCTCTGA
TCTCGACAAAGAAGAGCGTCCTGAAGTGCTTTCTCTACTTCCACCATATG
AAGGAAAAACAGTTCTGGAATTTGGAGCTGGAATCGGTAGATTTACCGGT
GAATTAGCTAAGAAGGCTGGTCATGTTATAGCCCTGGACTTTATTGACAG
TGTCATCAAGAAGAATGA
back to top