CF832333

Overview
NameCF832333
Unique NameCF832333
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length781
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12148 contig Csv1_Contig12148:407..1188. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832333 vs. ExPASy Swiss-Prot
Match: PREP2_ARATH (Presequence protease 2, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=PREP2 PE=1 SV=1)

HSP 1 Score: 435.647 bits (1119), Expect = 1.415e-121
Identity = 214/260 (82.31%), Postives = 244/260 (93.85%), Query Frame = 2
Query:    2 HLMLGTPASPLRKILLESGLGDAIVGGGIEDELLQPQFSIGLKNVSEDDIQTVEELIMDTLKKLADEGFDSDAVEASMNTIEFSLRENNTGSFPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMALKARLAEEGSKAVFSPLIEKYILNNPHCVTVEMQPDPEKASRDEAAEKEILAKVKSSMTKEDLAELARATEELRLKQETPDPPEALRSVPSLSLRDIPKEPIRVPTEVGDINGVKSLQHDLFTNDVLYTEVVFDM 781
            HLMLGTPASPLRKILLESGLG+A+V  G+EDELLQPQFSIGLK VS+D++Q VEEL+M+TL+KLADEGFD+DAVEASMNTIEFSLRENNTGS PRGLSLML+S+ KWIYDM+PFEPLKYE+PL +LKAR+AE+GSK+VFSPLIE+YILNNPHCVT+EMQPDPEKAS +EA EK IL KVK+SMT+EDL ELARATEELRLKQETPDPP+AL+ VPSL+L DIPKEPI VPTEVGDINGVK L++DLFTN++LYTEVVFDM
Sbjct:  408 HLMLGTPASPLRKILLESGLGEALVNSGMEDELLQPQFSIGLKGVSDDNVQKVEELVMNTLRKLADEGFDTDAVEASMNTIEFSLRENNTGSSPRGLSLMLQSIAKWIYDMDPFEPLKYEEPLKSLKARIAEKGSKSVFSPLIEEYILNNPHCVTIEMQPDPEKASLEEAEEKSILEKVKASMTEEDLTELARATEELRLKQETPDPPDALKCVPSLNLSDIPKEPIYVPTEVGDINGVKVLRNDLFTNNILYTEVVFDM 667          
BLAST of CF832333 vs. ExPASy Swiss-Prot
Match: PREP1_ARATH (Presequence protease 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=PREP1 PE=1 SV=2)

HSP 1 Score: 427.943 bits (1099), Expect = 2.950e-119
Identity = 212/260 (81.54%), Postives = 238/260 (91.54%), Query Frame = 2
Query:    2 HLMLGTPASPLRKILLESGLGDAIVGGGIEDELLQPQFSIGLKNVSEDDIQTVEELIMDTLKKLADEGFDSDAVEASMNTIEFSLRENNTGSFPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMALKARLAEEGSKAVFSPLIEKYILNNPHCVTVEMQPDPEKASRDEAAEKEILAKVKSSMTKEDLAELARATEELRLKQETPDPPEALRSVPSLSLRDIPKEPIRVPTEVGDINGVKSLQHDLFTNDVLYTEVVFDM 781
            HLMLGTPASPLRKILLESGLG+A+V  G+ DELLQPQF IGLK VSE+++Q VEELIMDTLKKLA+EGFD+DAVEASMNTIEFSLRENNTGSFPRGLSLML+S+ KWIYDM+PFEPLKY +PL ALK R+AEEGSKAVFSPLIEK ILNN H VT+EMQPDPEKA+++E  EK IL KVK++MT+EDLAELARATEEL+LKQETPDPPEALR VPSL+L DIPKEP  VPTEVGDINGVK L+HDLFTND++YTEVVFD+
Sbjct:  409 HLMLGTPASPLRKILLESGLGEALVSSGLSDELLQPQFGIGLKGVSEENVQKVEELIMDTLKKLAEEGFDNDAVEASMNTIEFSLRENNTGSFPRGLSLMLQSISKWIYDMDPFEPLKYTEPLKALKTRIAEEGSKAVFSPLIEKLILNNSHRVTIEMQPDPEKATQEEVEEKNILEKVKAAMTEEDLAELARATEELKLKQETPDPPEALRCVPSLNLGDIPKEPTYVPTEVGDINGVKVLRHDLFTNDIIYTEVVFDI 668          
BLAST of CF832333 vs. ExPASy Swiss-Prot
Match: HYPA_CLOPE (Protein hypA OS=Clostridium perfringens GN=hypA PE=4 SV=2)

HSP 1 Score: 184.882 bits (468), Expect = 4.349e-46
Identity = 95/259 (36.68%), Postives = 155/259 (59.85%), Query Frame = 2
Query:    2 HLMLGTPASPLRKILLESGLGDAIVGGGIEDELLQPQFSIGLKNVSEDDIQTVEELIMDTLKKLADEGFDSDAVEASMNTIEFSLRENNTGSFPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMALKARLAEEGSKAVFSPLIEKYILNNPHCVTVEMQPDPEKASRDEAAEKEILAKVKSSMTKEDLAELARATEELRLKQETPDPPEALRSVPSLSLRDIPKEPIRVPTEVGDINGVKSLQHDLFTNDVLYTEVVFD 778
            +L+  + A+PL+K L+++G+G A V G  ++   Q  F++ +KN   +  +  ++++MDTLK L + G D + +EAS+N +EF LRE + GS+P GL   L+ M  W+YD +P+  L+YEK L  +K+ L        F  LIE+Y++NN H   V + P+     +  A  K+ L ++K+S  ++ L E+    ++L+ +Q TPD  E L S+P LSL DI KE  ++PTE  +I+G+ +L HD  TN + Y    F+
Sbjct:  312 YLLTRSTAAPLKKALIDAGIGKA-VSGDFDNSTKQSAFTVLVKNAELNKEEEFKKVVMDTLKDLVENGIDKELIEASINRVEFELREGDYGSYPNGLIYYLKVMDSWLYDGDPYVHLEYEKNLEKIKSALTSN----YFEDLIERYMINNTHSSLVSLHPEKGINEKKSAELKKKLEEIKNSFDEKTLNEIIDNCKKLKERQSTPDKKEDLESIPMLSLEDIDKEATKIPTEEKEIDGITTLHHDFHTNKIDYVNFFFN 565          
BLAST of CF832333 vs. ExPASy Swiss-Prot
Match: CYM1_NEUCR (Mitochondrial presequence protease OS=Neurospora crassa GN=cym-1 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.664e-21
Identity = 75/262 (28.63%), Postives = 133/262 (50.76%), Query Frame = 2
Query:    5 LMLGTPASPLRKILLESGLG-DAIVGGGIEDELLQPQFSIGLKNVSEDDIQTVEELIMDTLKKLADEGFDSDAVEASMNTIEFSLRENNTGSFPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMALKARLAEEGSKAVFSPLIEKYILNNPHCVTVEMQPDP----EKASRDEAAEKEILAKVKSSMTKEDLAELARATEELR-LKQETPDPPEALRSVPSLSLRDIPKEPIRVPTEVGDINGVKSLQHDLFTNDVLYTEVV 772
            L++    SPL K L+ESGLG D     G +       FSIGL  V E+D+  V+  + + L+ + D+GF+   ++  ++ +E  L+ + T +F  G+SL+ R   KW   ++PF+ L +   + A +  LA+ G       LI+KY++N+ + ++  M P P    E A  +E      +++V  +   E+ A  A    EL+ L +++    E L  +PS+ ++DIP++   V     +   VK+  H+  TN + Y   +
Sbjct:  339 LLMDGYGSPLYKGLIESGLGTDWSPNTGYDSSGKLGIFSIGLSGVQEEDVPKVKAKVQEILRSMRDKGFERSKIDGYLHQLELGLK-HKTANF--GMSLLHRLKPKWFVGVDPFDSLAWNDTIAAFETELAKGG---YLEGLIDKYLIND-NTLSFTMAPSPTFSQELAQEEETRLSTKISEVVKAAGSEEEARAALEARELKLLAEQSKTNTEDLGCLPSVHVKDIPRQKDSVILRHDNTARVKTQWHEAPTNGLTYFRAI 593          
BLAST of CF832333 vs. ExPASy Swiss-Prot
Match: CYM1_SCHPO (Mitochondrial presequence protease OS=Schizosaccharomyces pombe GN=cym1 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.174e-21
Identity = 75/240 (31.25%), Postives = 120/240 (50.00%), Query Frame = 2
Query:   23 ASPLRKILLESGLG-DAIVGGGIEDELLQPQFSIGLKNVSEDDIQTVEELIMDTLKKLADEGFDSDAVEASMNTIEFSLRENNTGSFPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMALKARLAEEGSKAVFSPLIEKYILNNPHCVTVEMQPDPEKASRDEAAEKEILAKVKSSMTKEDLAELARATEELRLKQETPDPPEALRSVPSLSLRDIPKEPIRVPTEVGDINGVKSLQHDL 739
            +SP  K L+ESGLG D     G +    +  FS+GL+  SE+ +  +E L+      LA +GF+++ +EA ++ +E SL+ + +  F  GL+  L     W    +P + L + K +  LK +        +F  LI+KYIL N       M P      R + AE + L +  S +T ED+AE+ + + +L   Q TP     L   P+LS+ DIP+       +  DI G+K+  +DL
Sbjct:  343 SSPFYKALIESGLGTDFAPNSGYDSTTKRGIFSVGLEGASEESLAKIENLVYSIFNDLALKGFENEKLEAILHQMEISLK-HKSAHFGIGLAQSLPF--NWFNGADPADWLSFNKQIEWLKQK---NSDGKLFQKLIKKYILENKSRFVFTMLPSSTFPQRLQEAEAKKLQERTSKLTDEDIAEIEKTSVKLLEAQSTPADTSCL---PTLSVSDIPETIDETKLKFLDIAGMKAQWYDL 573          
BLAST of CF832333 vs. ExPASy Swiss-Prot
Match: CYM1_GIBZE (Mitochondrial presequence protease OS=Gibberella zeae GN=CYM1 PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 5.354e-20
Identity = 70/262 (26.72%), Postives = 126/262 (48.09%), Query Frame = 2
Query:    5 LMLGTPASPLRKILLESGLG-DAIVGGGIEDELLQPQFSIGLKNVSEDDIQTVEELIMDTLKKLADEGFDSDAVEASMNTIEFSLRENNTGSFPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMALKARLAEEGSKAVFSPLIEKYILNNPHCVTVEMQPDPEKA-----SRDEAAEKEILAKVKSSMTKEDLAELARATEELRLKQETPDPPEALRSVPSLSLRDIPKEPIRVPTEVGDINGVKSLQHDLFTNDVLYTEVV 772
            L++    SPL + L+E+G+G D     G +    +  FSIGL  V E D+  ++E +   L+   ++GFD   ++ S++ +E SL+ + T +F  G S++ R   KW   ++PF+ L +   +   +A++AE         LI+KY+LN+ + +T  M P             E     I A +K + ++E   +     E+  L ++     E L  +P++ ++DIP+    V     + NG K   H+  TN + Y   +
Sbjct:  330 LLMDGYGSPLYRGLIEAGMGADWSPNAGYDSSAKKGIFSIGLTGVQEGDVPKLKEKVQQILRDARNKGFDKTKIDGSLHQLELSLK-HKTANF--GFSMLNRLKPKWFNGVDPFDSLAWNDTINGFQAKMAEGN---YLEGLIDKYLLND-NTLTFTMAPSTTYGEDLVKEEQERLSTRIQAAIKEAGSEEKARKHFEKQEQELLVEQNKTNTEDLGCLPTVHVKDIPRSKEAVVVRDENANGTKIQWHEAPTNGLTYFRAI 584          
BLAST of CF832333 vs. ExPASy Swiss-Prot
Match: PREP_PONAB (Presequence protease, mitochondrial OS=Pongo abelii GN=PITRM1 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.993e-20
Identity = 72/240 (30.00%), Postives = 115/240 (47.92%), Query Frame = 2
Query:    5 LMLGTPASPLRKILLESGLG-DAIVGGGIEDELLQPQFSIGLKNVSEDDIQTVEELIMDTLKKLADEGFDSDAVEASMNTIEFSLRENNTGSFPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMALKARLAEEGSKAVFSPLIEKYILNNPHCVTVEMQPDPEKASRDEAAEKEILAKVKSSMTKEDLAELARATEELRLKQETPDPPEALRSVPSLSLRD----IPKEPIRVPTEVGDI 709
            L+   P SP  K L+ESGLG D     G      +  FS+GL+ ++E DI+TV  L+  T+ ++ ++GF+ D +EA ++ IE  ++  +T SF  GL L       W +D +P E LK    L   +  L E  +       +++Y  NN H +T+ M+PD +   +    E   L +   +++  D  ++     ELR +Q  P     L   P+L + D    IP   + V    GDI
Sbjct:  352 LLTSGPNSPFYKALIESGLGTDFSPDVGYNGYTREAYFSVGLQGIAEKDIETVRSLVDRTIDEVVEKGFEDDRIEALLHKIEIQMKHQST-SF--GLMLTSYIASCWNHDGDPVELLKLGNQLAKFRQCLQE--NPKFLQEKVKQYFKNNQHKLTLSMRPDDKYHEKQAQVEATKLKQKVEALSPGDRQQIYEKGLELRTQQSKPQDASCL---PALKVSDIEPTIPVTELDVVLTAGDI 583          
BLAST of CF832333 vs. ExPASy Swiss-Prot
Match: PREP_DANRE (Presequence protease, mitochondrial OS=Danio rerio GN=pitrm1 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.993e-20
Identity = 73/255 (28.63%), Postives = 121/255 (47.45%), Query Frame = 2
Query:    5 LMLGTPASPLRKILLESGLG-DAIVGGGIEDELLQPQFSIGLKNVSEDDIQTVEELIMDTLKKLADEGFDSDAVEASMNTIEFSLRENNTGSFPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMALKARLAEEGSKAVFSPLIEKYILNNPHCVTVEMQPDPEKASRDEAAEKEILAKVKSSMTKEDLAELARATEELRLKQETPDPPEALRSVPSLSLRDIPKEPI--RVPTEVGDINGVKSLQHDLFTNDVLY 760
            LM+  P SP  K L+E  +G D     G +    Q  F+IGL+ ++EDD +TV+ +I  T+  +   GF+ + +EA ++ IE  ++  +T SF  GL+L       W +D +P + LK  + +   +  L E  +       ++ Y  NN H +T+ M PD     +   AE++ L +    ++ ED  ++     +L   Q T      L   P+L + DI  EPI    P + G   GV     +  TN ++Y
Sbjct:  347 LMMSGPNSPFYKALIEPKIGSDFSSSAGFDGSTRQASFTIGLQGMAEDDTETVKHIIAQTIDDIIASGFEEEQIEALLHKIEIQMKHQST-SF--GLALASYIASLWNHDGDPVQLLKISESVSRFRQCLKE--NPRYLQEKVQHYFKNNTHQLTLSMSPDERFLEKQAEAEEQKLQQKIQILSSEDRKDIYEKGLQLLAVQSTTQDASCL---PALKVSDI--EPIIPYTPVQPGAAGGVPVQYCEQPTNGMVY 591          
BLAST of CF832333 vs. ExPASy Swiss-Prot
Match: CYM1_YARLI (Mitochondrial presequence protease OS=Yarrowia lipolytica GN=CYM1 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 9.133e-20
Identity = 66/232 (28.45%), Postives = 115/232 (49.57%), Query Frame = 2
Query:    5 LMLGTPASPLRKILLESGLGDAIVGG-GIEDELLQPQFSIGLKNVSEDDIQTVEELIMDTLKKLADEGFDSDAVEASMNTIEFSLRENNTGSFPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMALKARLAEEGSKAVFSPLIEKYILNNPHCVTVEMQPDPEKASRDEAAEKEILAKVKSSMTKEDLAELARATEELRLKQETPDPPEALRSVPSLSLRDIPKEPIRVPTE 697
            L++   +SPL + L++SGLG +     G++       FS+GL+ V+E D+  VE +I+DT+K    EGFD   ++  ++  E + ++ N      G++LM   +  W   ++P E L++   L      +  E        +++KY+L+N +    +M P+P+     +  E EIL    + +T+ D  E+      L   QE    PE L  +P+L + DIP+   RV  E
Sbjct:  336 LLIDGHSSPLHQKLIDSGLGSSYSPNTGLDSAPGANIFSVGLQGVTESDLTKVETVILDTIKTTVAEGFDKGRIDGLLHQTELARKDQNA---KFGMALMNGVLPGWFNQVDPLEALEWNSVLDRFNKDM--EADPEFLQKVMKKYLLDNKY-FHFQMNPNPDYEKNVQEKEDEILTDKLAKLTESDKEEIFETGANLEKMQE---EPENLDCLPTLHVSDIPRSKPRVALE 558          
BLAST of CF832333 vs. ExPASy Swiss-Prot
Match: PREP_MOUSE (Presequence protease, mitochondrial OS=Mus musculus GN=Pitrm1 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.558e-19
Identity = 70/240 (29.17%), Postives = 119/240 (49.58%), Query Frame = 2
Query:    5 LMLGTPASPLRKILLESGLG-DAIVGGGIEDELLQPQFSIGLKNVSEDDIQTVEELIMDTLKKLADEGFDSDAVEASMNTIEFSLRENNTGSFPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMALKARLAEEGSKAVFSPLIEKYILNNPHCVTVEMQPDPEKASRDEAAEKEILAKVKSSMTKEDLAELARATEELRLKQETPDPPEALRSVPSLSLRDI----PKEPIRVPTEVGDI 709
            L++  P SP  K L+ESGLG D     G      +  FS+GL+ ++E D++TV EL+  T++++ ++GF+ D +EA ++ IE   + + + SF  GL+L       W +D +P E L+    L   +  L E  +       +E+Y  NN H +T+ M+PD +   +    E E L +  +S++  D  ++     EL+ +Q        L   P+L + DI    P   + +    GDI
Sbjct:  352 LLIAGPNSPFYKALIESGLGTDFSPDVGYNGYTREAYFSVGLQGIAEKDVKTVRELVDRTIEEVIEKGFEDDRIEALLHKIEIQTK-HQSASF--GLTLTSYIASCWNHDGDPVELLQIGSQLTRFRKCLKE--NPKFLQEKVEQYFKNNQHKLTLSMKPDDKYYEKQTQMETEKLEQKVNSLSPADKQQIYEKGLELQTQQSKHQDASCL---PALKVSDIEPSMPFTKLDIGLAAGDI 583          
The following BLAST results are available for this feature:
BLAST of CF832333 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
PREP2_ARATH1.415e-12182.31Presequence protease 2, chloroplastic/mitochondria... [more]
PREP1_ARATH2.950e-11981.54Presequence protease 1, chloroplastic/mitochondria... [more]
HYPA_CLOPE4.349e-4636.68Protein hypA OS=Clostridium perfringens GN=hypA PE... [more]
CYM1_NEUCR1.664e-2128.63Mitochondrial presequence protease OS=Neurospora c... [more]
CYM1_SCHPO2.174e-2131.25Mitochondrial presequence protease OS=Schizosaccha... [more]
CYM1_GIBZE5.354e-2026.72Mitochondrial presequence protease OS=Gibberella z... [more]
PREP_PONAB6.993e-2030.00Presequence protease, mitochondrial OS=Pongo abeli... [more]
PREP_DANRE6.993e-2028.63Presequence protease, mitochondrial OS=Danio rerio... [more]
CYM1_YARLI9.133e-2028.45Mitochondrial presequence protease OS=Yarrowia lip... [more]
PREP_MOUSE1.558e-1929.17Presequence protease, mitochondrial OS=Mus musculu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01L05_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01L05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832333 ID=CF832333; Name=CF832333; organism=Citrus sinensis; type=EST; length=781bp
TCATCTTATGCTGGGAACTCCTGCTTCTCCCTTGAGGAAAATTTTACTAG
AAAGTGGTCTTGGAGATGCCATTGTTGGTGGTGGGATTGAAGATGAACTC
CTTCAGCCTCAATTTAGTATCGGATTGAAGAATGTTTCTGAAGATGACAT
TCAAACGGTAGAAGAATTAATCATGGATACACTAAAAAAACTAGCAGACG
AAGGTTTTGATAGTGATGCTGTAGAGGCATCCATGAATACAATAGAGTTT
TCTCTCAGGGAAAATAATACTGGGTCATTTCCTCGTGGCTTATCACTGAT
GCTTCGATCCATGGGTAAATGGATATATGATATGAATCCATTTGAGCCAT
TGAAGTATGAGAAACCCTTGATGGCCCTTAAAGCACGATTAGCTGAGGAG
GGCTCCAAAGCTGTTTTCTCTCCTCTAATTGAGAAATATATTTTAAACAA
TCCCCACTGTGTTACGGTAGAAATGCAGCCTGATCCAGAGAAAGCCTCTC
GTGATGAAGCAGCTGAAAAAGAAATTTTGGCTAAAGTCAAATCAAGCATG
ACAAAGGAAGATTTGGCTGAGCTAGCACGTGCTACTGAGGAGCTAAGGTT
GAAGCAAGAAACTCCTGACCCTCCAGAAGCTTTGCGAAGTGTTCCAAGTC
TATCTTTGCGTGACATTCCCAAAGAACCTATACGTGTTCCCACAGAGGTT
GGAGATATCAATGGAGTAAAAAGTCTGCAGCATGACCTTTTCACAAATGA
CGTCCTTTATACAGAAGTTGTCTTTGATATG
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