CF832550
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832550 vs. ExPASy Swiss-Prot
Match: PABP2_ARATH (Polyadenylate-binding protein 2 OS=Arabidopsis thaliana GN=PAB2 PE=1 SV=1) HSP 1 Score: 296.204 bits (757), Expect = 7.891e-80 Identity = 148/196 (75.51%), Postives = 167/196 (85.20%), Query Frame = 1 Query: 34 KLRGRTPLG------------GGANANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFL 585 +L+G+TP G GGA A QFG TSLYVGDL+ NVTDSQL+D F QMG VV+VRVCRDL TRRSLGYGYVNF+N Q+AARA++ LN+ PL GKPIRVMYSHRDPS+R+SGAGNIFIKNLD++IDHKALHDTFS+FGNI+SCKVA D +GQSKGYGFVQ+ NEESAQKAIEKLNGMLLNDKQVYVG FL Sbjct: 5 QLQGQTPNGSTAAVTSAPATSGGATATQFGNTSLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQELNYIPLYGKPIRVMYSHRDPSVRRSGAGNIFIKNLDESIDHKALHDTFSSFGNIVSCKVAVDSSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYVGPFL 200 HSP 2 Score: 114.005 bits (284), Expect = 5.554e-25 Identity = 60/168 (35.71%), Postives = 98/168 (58.33%), Query Frame = 1 Query: 85 GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRV----MYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVG 576 G ++++ +L+ ++ L+D F+ G +VS +V D S+ +S GYG+V ++N + A +A+E LN LN K + V RD + K+ N+++KNL ++ L + F +G I S V D G+SKG+GFV F+N + A +A+E LNG +DK+ YVG Sbjct: 122 GAGNIFIKNLDESIDHKALHDTFSSFGNIVSCKVAVD-SSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYVGPFLRRQERDSTANKTKFTNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGEGKSKGFGFVNFENADDAARAVESLNGHKFDDKEWYVG 288 HSP 3 Score: 111.309 bits (277), Expect = 3.600e-24 Identity = 68/185 (36.76%), Postives = 101/185 (54.59%), Query Frame = 1 Query: 67 ANANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRV----MYSHRDPSLR------------KSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYV 573 + AN+ T++YV +L + TD L + F + G++ S V +D +S G+G+VNF NA +AARA+E LN + K V S R+ LR K + N+++KNLD +I + L + FS FG + S KV D NG SKG GFV F E A +A+ +L+G ++ K +YV Sbjct: 207 STANKTKFTNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKD-GEGKSKGFGFVNFENADDAARAVESLNGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADKFQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPNGTSKGSGFVAFATPEEATEAMSQLSGKMIESKPLYV 390
BLAST of CF832550 vs. ExPASy Swiss-Prot
Match: PABP_ASPOR (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus oryzae GN=pab1 PE=3 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 1.828e-60 Identity = 109/172 (63.37%), Postives = 140/172 (81.40%), Query Frame = 1 Query: 70 NANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFL 585 NA+Q + SLYVG+L+ +VT++ LY+LF+ +GQV S+RVCRD TRRSLGY YVN++N + RALE LN+T + GKP R+M+S RDP+LRK+G GN+FIKNLD AID+KALHDTF+AFGNILSCKVA D G SKGYGFV ++ E+A AI+ +NGMLLNDK+V+VGH + Sbjct: 42 NASQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHI 213 HSP 2 Score: 98.2117 bits (243), Expect = 3.154e-20 Identity = 52/170 (30.59%), Postives = 98/170 (57.65%), Query Frame = 1 Query: 85 GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMY--SHRDPSLR----KSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVG 576 G ++++ +L++ + + L+D F G ++S +V +D S GYG+V++ A+ A A++ +N LN K + V + S +D + K+ N++IKN+D+ + + + F FG I S ++ D G+S+G+GFV F ESAQ A++++N + +++YVG Sbjct: 135 GQGNVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQD-EFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNIDQDVTEEEFRELFEKFGEITSATLSRDQEGKSRGFGFVNFSTHESAQAAVDEMNEKEIRTQKLYVG 303
BLAST of CF832550 vs. ExPASy Swiss-Prot
Match: PABP_NEOFI (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=pab1 PE=3 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 2.387e-60 Identity = 109/172 (63.37%), Postives = 140/172 (81.40%), Query Frame = 1 Query: 70 NANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFL 585 +ANQ + SLYVG+L+ +VT++ LY+LF+ +GQV S+RVCRD TRRSLGY YVN++N + RALE LN+T + GKP R+M+S RDP+LRK+G GN+FIKNLD AID+KALHDTF+AFGNILSCKVA D G SKGYGFV ++ E+A AI+ +NGMLLNDK+V+VGH + Sbjct: 45 SANQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHI 216 HSP 2 Score: 97.4413 bits (241), Expect = 5.380e-20 Identity = 52/170 (30.59%), Postives = 97/170 (57.06%), Query Frame = 1 Query: 85 GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMY--SHRDPSLR----KSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVG 576 G ++++ +L+A + + L+D F G ++S +V +D S GYG+V++ A+ A A++ +N LN K + V + S +D + K+ N++IKN+D+ + + F FG I S ++ D G+S+G+GFV F +SAQ A++++N + +++YVG Sbjct: 138 GQGNVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQD-EFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNIDQEVTDEEFRKMFEKFGEITSATLSRDQEGKSRGFGFVNFSTHDSAQAAVDEMNDKEIKGQKLYVG 306 HSP 3 Score: 82.8037 bits (203), Expect = 1.371e-15 Identity = 58/222 (26.13%), Postives = 97/222 (43.69%), Query Frame = 1 Query: 91 TSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPI---RVMYSH-RDPSLRKSGAG------------NIFIKNLDKAIDHKALHDTFSAFGNILSCKVATD---------------------------------------------LNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYV 573 T++Y+ +++ VTD + +F + G++ S + RD +S G+G+VNFS A A++ +N + G+ + R H R+ LRK N+++KNL +D + L + FS FG I S KV D + G+SKG+GFV F + + A KA+ ++N ++N K +YV Sbjct: 233 TNVYIKNIDQEVTDEEFRKMFEKFGEITSATLSRD-QEGKSRGFGFVNFSTHDSAQAAVDEMNDKEIKGQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDVDDEKLRELFSPFGTITSAKVMRDTVTAGETSESEKEKESNKENEKEGEEKTEEKPKESEEEAKKTEKKILGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYV 453
BLAST of CF832550 vs. ExPASy Swiss-Prot
Match: PABP_ASPNC (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=pab1 PE=3 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 2.387e-60 Identity = 109/171 (63.74%), Postives = 139/171 (81.29%), Query Frame = 1 Query: 73 ANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFL 585 ANQ + SLYVG+L+ +VT++ LY+LF+ +GQV S+RVCRD TRRSLGY YVN++N + RALE LN+T + GKP R+M+S RDP+LRK+G GN+FIKNLD AID+KALHDTF+AFGNILSCKVA D G SKGYGFV ++ E+A AI+ +NGMLLNDK+V+VGH + Sbjct: 48 ANQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHI 218 HSP 2 Score: 101.679 bits (252), Expect = 2.853e-21 Identity = 56/170 (32.94%), Postives = 96/170 (56.47%), Query Frame = 1 Query: 85 GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMY--SHRDPSLR----KSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVG 576 G ++++ +L++ + + L+D F G ++S +V +D S GYG+V++ A+ A A++ +N LN K + V + S +D + K+ N++IKNLD ID F FG I S ++ D G+S+G+GFV F ESAQ A+E++N + +++YVG Sbjct: 140 GQGNVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQD-EFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNLDSEIDDDEFRKMFEKFGEITSATLSRDQEGKSRGFGFVNFSTHESAQAAVEEMNDKEIRSQKLYVG 308
BLAST of CF832550 vs. ExPASy Swiss-Prot
Match: PABP_ASPCL (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus clavatus GN=pab1 PE=3 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 2.387e-60 Identity = 109/172 (63.37%), Postives = 139/172 (80.81%), Query Frame = 1 Query: 70 NANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFL 585 N NQ + SLYVG+L+ +VT++ LY+LF+ +GQV S+RVCRD TRRSLGY YVN++N + RALE LN+T + GKP R+M+S RDP+LRK+G GN+FIKNLD AID+KALHDTF+AFGNILSCKVA D G SKGYGFV ++ E+A AI+ +NGMLLNDK+V+VGH + Sbjct: 44 NNNQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHI 215 HSP 2 Score: 93.2041 bits (230), Expect = 1.015e-18 Identity = 51/170 (30.00%), Postives = 96/170 (56.47%), Query Frame = 1 Query: 85 GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMY--SHRDPSLR----KSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVG 576 G ++++ +L++ + + L+D F G ++S +V +D S GYG+V++ A+ A A++ +N LN K + V + S +D + K+ NI+IKN+D + + F FG I S ++ D G+S+G+GFV + ESAQ A+++++ + +++YVG Sbjct: 137 GQGNVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQD-EFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFDEMKANFTNIYIKNIDPDVTEEEFRKIFEQFGEITSATLSRDPEGKSRGFGFVNYSTHESAQAAVDEMHDKEVKTQKLYVG 305
BLAST of CF832550 vs. ExPASy Swiss-Prot
Match: PABP3_ARATH (Polyadenylate-binding protein 3 OS=Arabidopsis thaliana GN=PAB3 PE=2 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 3.118e-60 Identity = 112/165 (67.88%), Postives = 136/165 (82.42%), Query Frame = 1 Query: 91 TSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHFL 585 +SLY GDL+ VT++ L+DLF + VVSVRVCRD RRSLGY Y+NFSN +A RA+E LN+TPL +PIR+M S+RDPS R SG GNIFIKNLD +ID+KAL +TFS+FG ILSCKVA D+ G+SKGYGFVQF+ EESAQ AI+KLNGML+NDKQV+VGHF+ Sbjct: 49 SSLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRD-QNRRSLGYAYINFSNPNDAYRAMEALNYTPLFDRPIRIMLSNRDPSTRLSGKGNIFIKNLDASIDNKALFETFSSFGTILSCKVAMDVTGRSKGYGFVQFEKEESAQAAIDKLNGMLMNDKQVFVGHFI 212 HSP 2 Score: 106.301 bits (264), Expect = 1.158e-22 Identity = 60/170 (35.29%), Postives = 94/170 (55.29%), Query Frame = 1 Query: 85 GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKP------IRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVG 576 G ++++ +L+A++ + L++ F+ G ++S +V D+ T RS GYG+V F + A A++ LN +N K IR RD + N+++KNL K I L TF FG I S V D +G S+ +GFV F+ E+A A+EK+NG+ L D +YVG Sbjct: 134 GKGNIFIKNLDASIDNKALFETFSSFGTILSCKVAMDV-TGRSKGYGFVQFEKEESAQAAIDKLNGMLMNDKQVFVGHFIRRQERARDENTPTPRFTNVYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGNSRCFGFVNFECTEAAASAVEKMNGISLGDDVLYVG 302 HSP 3 Score: 97.8265 bits (242), Expect = 4.119e-20 Identity = 58/177 (32.77%), Postives = 94/177 (53.11%), Query Frame = 1 Query: 91 TSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRV----MYSHRDPSLR------------KSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYV 573 T++YV +L + + +L F + G + S V RD S S +G+VNF + AA A+E +N L + V S R+ LR KS N+++KNLD ++D + L + FS +GN+ S KV + G S+G+GFV + N E A +A+ ++NG ++ K +Y+ Sbjct: 229 TNVYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGN-SRCFGFVNFECTEAAASAVEKMNGISLGDDVLYVGRAQKKSEREEELRRKFEQERINRFEKSQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRALSEMNGKMIGRKPLYI 404
BLAST of CF832550 vs. ExPASy Swiss-Prot
Match: PABP_SCHPO (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Schizosaccharomyces pombe GN=pab1 PE=1 SV=2) HSP 1 Score: 230.72 bits (587), Expect = 4.072e-60 Identity = 113/181 (62.43%), Postives = 138/181 (76.24%), Query Frame = 1 Query: 49 TPLGGGANANQFGTT----SLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGH 579 TP + A GT SLYVG+L+ +VT++ L++LFN +G V S+RVCRD TRRSLGY YVNF N ++ +AL+ LN+T + G+P R+M+S RDPSLRK G GN+FIKNLD AID+KALHDTFSAFG ILSCKVA D G +KGYGFV FD+ ESA AIE +NGMLLNDK+VYVGH Sbjct: 62 TPTNASSVATPSGTAPTSASLYVGELDPSVTEAMLFELFNSIGPVASIRVCRDAVTRRSLGYAYVNFHNMEDGEKALDELNYTLIKGRPCRIMWSQRDPSLRKMGTGNVFIKNLDPAIDNKALHDTFSAFGKILSCKVAVDELGNAKGYGFVHFDSVESANAAIEHVNGMLLNDKKVYVGH 242 HSP 2 Score: 107.842 bits (268), Expect = 3.981e-23 Identity = 62/177 (35.03%), Postives = 99/177 (55.93%), Query Frame = 1 Query: 91 TSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPI---RVMYSH-RDPSLRKS------------GAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYV 573 T++Y+ +L+ +T+ + DLF Q G++ S+ + +D + + G+G+VN++N + A +A++ LN GK + R H R+ LRK N+FIKNL +D + L FSAFG I S K+ TD G+SKG+GFV + E A KA+ ++N +L K +YV Sbjct: 261 TNVYIKNLDTEITEQEFSDLFGQFGEITSLSLVKDQNDKPR-GFGFVNYANHECAQKAVDELNDKEYKGKKLYVGRAQKKHEREEELRKRYEQMKLEKMNKYQGVNLFIKNLQDEVDDERLKAEFSAFGTITSAKIMTDEQGKSKGFGFVCYTTPEEANKAVTEMNQRMLAGKPLYV 436 HSP 3 Score: 102.834 bits (255), Expect = 1.280e-21 Identity = 57/172 (33.14%), Postives = 97/172 (56.40%), Query Frame = 1 Query: 79 QFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMY--SHRDPSLR----KSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVG 576 + GT ++++ +L+ + + L+D F+ G+++S +V D + GYG+V+F + + A A+E +N LN K + V + S R+ + K+ N++IKNLD I + D F FG I S + D N + +G+GFV + N E AQKA+++LN K++YVG Sbjct: 164 KMGTGNVFIKNLDPAIDNKALHDTFSAFGKILSCKVAVD-ELGNAKGYGFVHFDSVESANAAIEHVNGMLLNDKKVYVGHHVSRRERQSKVEALKANFTNVYIKNLDTEITEQEFSDLFGQFGEITSLSLVKDQNDKPRGFGFVNYANHECAQKAVDELNDKEYKGKKLYVG 334
BLAST of CF832550 vs. ExPASy Swiss-Prot
Match: PABP4_HUMAN (Polyadenylate-binding protein 4 OS=Homo sapiens GN=PABPC4 PE=1 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 4.072e-60 Identity = 111/172 (64.53%), Postives = 139/172 (80.81%), Query Frame = 1 Query: 67 ANANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHF 582 A A+ + SLYVGDL ++VT++ LY+ F+ G V+S+RVCRD+ TRRSLGY YVNF +A RAL+ +NF + GKPIR+M+S RDPSLRKSG GN+FIKNLDK+ID+KAL+DTFSAFGNILSCKV D NG SKGY FV F+ +E+A KAIEK+NGMLLND++V+VG F Sbjct: 3 AAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRF 173 HSP 2 Score: 112.464 bits (280), Expect = 1.616e-24 Identity = 69/199 (34.67%), Postives = 109/199 (54.77%), Query Frame = 1 Query: 25 GRFKLRGRTPLGGGANANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPI----------------RVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYV 573 GRFK R GA A +F T++Y+ + V D L +LF+Q G+ +SV+V RD +S G+G+V++ ++A +A+E +N ++GK I R + + + N++IKNLD ID + L FS FG+I S KV + +G+SKG+GFV F + E A KA+ ++NG ++ K +YV Sbjct: 171 GRFKSRKEREAELGAKAKEF--TNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYV 365 HSP 3 Score: 107.842 bits (268), Expect = 3.981e-23 Identity = 58/170 (34.12%), Postives = 99/170 (58.24%), Query Frame = 1 Query: 85 GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRV-MYSHRDPSLRKSGAG-----NIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVG 576 G ++++ +L+ ++ + LYD F+ G ++S +V D S GY +V+F + A +A+E +N LN + + V + R + GA N++IKN + +D ++L + FS FG LS KV D NG+SKG+GFV ++ E A KA+E++NG ++ K ++VG Sbjct: 97 GVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD--ENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVG 264
BLAST of CF832550 vs. ExPASy Swiss-Prot
Match: PABP1_RAT (Polyadenylate-binding protein 1 OS=Rattus norvegicus GN=Pabpc1 PE=2 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 6.945e-60 Identity = 109/171 (63.74%), Postives = 139/171 (81.29%), Query Frame = 1 Query: 70 NANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHF 582 +A + SLYVGDL +VT++ LY+ F+ G ++S+RVCRD+ TRRSLGY YVNF +A RAL+ +NF + GKP+R+M+S RDPSLRKSG GNIFIKNLDK+ID+KAL+DTFSAFGNILSCKV D NG SKGYGFV F+ +E+A++AIEK+NGMLLND++V+VG F Sbjct: 4 SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRF 173 HSP 2 Score: 117.472 bits (293), Expect = 5.024e-26 Identity = 64/170 (37.65%), Postives = 101/170 (59.41%), Query Frame = 1 Query: 85 GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRV-MYSHRDPSLRKSGAG-----NIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVG 576 G ++++ +L+ ++ + LYD F+ G ++S +V D S GYG+V+F + A RA+E +N LN + + V + R + GA N++IKN + +D + L + F FG LS KV TD +G+SKG+GFV F+ E AQKA++++NG LN KQ+YVG Sbjct: 97 GVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD--ENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVG 264 HSP 3 Score: 110.538 bits (275), Expect = 6.141e-24 Identity = 71/200 (35.50%), Postives = 109/200 (54.50%), Query Frame = 1 Query: 25 GRFKLRGRTPLGGGANANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHR-----------------DPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYV 573 GRFK R GA A +F T++Y+ + ++ D +L +LF + G +SV+V D S + S G+G+V+F ++A +A++ +N LNGK I V + + D R G N+++KNLD ID + L FS FG I S KV + G+SKG+GFV F + E A KA+ ++NG ++ K +YV Sbjct: 171 GRFKSRKEREAELGARAKEF--TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGK-SKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365
BLAST of CF832550 vs. ExPASy Swiss-Prot
Match: PABP1_MOUSE (Polyadenylate-binding protein 1 OS=Mus musculus GN=Pabpc1 PE=1 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 6.945e-60 Identity = 109/171 (63.74%), Postives = 139/171 (81.29%), Query Frame = 1 Query: 70 NANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHRDPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGHF 582 +A + SLYVGDL +VT++ LY+ F+ G ++S+RVCRD+ TRRSLGY YVNF +A RAL+ +NF + GKP+R+M+S RDPSLRKSG GNIFIKNLDK+ID+KAL+DTFSAFGNILSCKV D NG SKGYGFV F+ +E+A++AIEK+NGMLLND++V+VG F Sbjct: 4 SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRF 173 HSP 2 Score: 117.472 bits (293), Expect = 5.024e-26 Identity = 64/170 (37.65%), Postives = 100/170 (58.82%), Query Frame = 1 Query: 85 GTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRV----MYSHRDPSL--RKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVG 576 G ++++ +L+ ++ + LYD F+ G ++S +V D S GYG+V+F + A RA+E +N LN + + V R+ L R N++IKN + +D + L + F FG LS KV TD +G+SKG+GFV F+ E AQKA++++NG LN KQ+YVG Sbjct: 97 GVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD--ENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSQKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVG 264 HSP 3 Score: 108.997 bits (271), Expect = 1.787e-23 Identity = 70/200 (35.00%), Postives = 109/200 (54.50%), Query Frame = 1 Query: 25 GRFKLRGRTPLGGGANANQFGTTSLYVGDLEANVTDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNFSNAQEAARALEMLNFTPLNGKPIRVMYSHR-----------------DPSLRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDLNGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYV 573 GRFK + GA A +F T++Y+ + ++ D +L +LF + G +SV+V D S + S G+G+V+F ++A +A++ +N LNGK I V + + D R G N+++KNLD ID + L FS FG I S KV + G+SKG+GFV F + E A KA+ ++NG ++ K +YV Sbjct: 171 GRFKSQKEREAELGARAKEF--TNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGK-SKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV 365 The following BLAST results are available for this feature:
BLAST of CF832550 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 170
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832550 ID=CF832550; Name=CF832550; organism=Citrus sinensis; type=EST; length=585bpback to top |