CF832579

Overview
NameCF832579
Unique NameCF832579
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length710
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2111 contig Csv1_Contig2111:206..915. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832579 vs. ExPASy Swiss-Prot
Match: UBC10_ARATH (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10 PE=1 SV=1)

HSP 1 Score: 300.056 bits (767), Expect = 7.936e-81
Identity = 140/144 (97.22%), Postives = 143/144 (99.31%), Query Frame = -1
Query:  279 RILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYAMG 710
            RILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP +SPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTD+NKYE+TARSWTQKYAMG
Sbjct:    5 RILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTARSWTQKYAMG 148          
BLAST of CF832579 vs. ExPASy Swiss-Prot
Match: UBC4_SOLLC (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 299.671 bits (766), Expect = 1.036e-80
Identity = 141/144 (97.92%), Postives = 142/144 (98.61%), Query Frame = -1
Query:  279 RILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYAMG 710
            RILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPYAGGVFLV+IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDR KYETTARSWTQKYAMG
Sbjct:    5 RILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPTDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAMG 148          
BLAST of CF832579 vs. ExPASy Swiss-Prot
Match: UBC9_ARATH (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1 SV=1)

HSP 1 Score: 299.286 bits (765), Expect = 1.354e-80
Identity = 139/144 (96.53%), Postives = 143/144 (99.31%), Query Frame = -1
Query:  279 RILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYAMG 710
            RILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTD+NKYE+TAR+WTQKYAMG
Sbjct:    5 RILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTARTWTQKYAMG 148          
BLAST of CF832579 vs. ExPASy Swiss-Prot
Match: UBC28_ARATH (Ubiquitin carrier protein E2 28 OS=Arabidopsis thaliana GN=UBC28 PE=2 SV=1)

HSP 1 Score: 298.13 bits (762), Expect = 3.016e-80
Identity = 139/144 (96.53%), Postives = 142/144 (98.61%), Query Frame = -1
Query:  279 RILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYAMG 710
            RILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLVTIHFPPDYPFKPPKVAFRTKVFHPN+NSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDR KYE+TARSWTQKYAMG
Sbjct:    5 RILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTARSWTQKYAMG 148          
BLAST of CF832579 vs. ExPASy Swiss-Prot
Match: UBC8_ARATH (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana GN=UBC8 PE=1 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 1.955e-79
Identity = 138/144 (95.83%), Postives = 141/144 (97.92%), Query Frame = -1
Query:  279 RILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYAMG 710
            RILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP +SPY+GGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDR KYE TAR+WTQKYAMG
Sbjct:    5 RILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYEATARNWTQKYAMG 148          
BLAST of CF832579 vs. ExPASy Swiss-Prot
Match: UBC11_ARATH (Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana GN=UBC11 PE=2 SV=2)

HSP 1 Score: 294.664 bits (753), Expect = 3.334e-79
Identity = 135/144 (93.75%), Postives = 144/144 (100.00%), Query Frame = -1
Query:  279 RILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYAMG 710
            RILKELKDLQKDPP++CSAGPVAEDMFHWQATIMGPP+SPYAGGVFLV+IHFPPDYPFKPPKV+F+TKV+HPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDR+KYE+TARSWTQKYAMG
Sbjct:    5 RILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYESTARSWTQKYAMG 148          
BLAST of CF832579 vs. ExPASy Swiss-Prot
Match: UBC30_ARATH (Ubiquitin carrier protein E2 30 OS=Arabidopsis thaliana GN=UBC30 PE=2 SV=1)

HSP 1 Score: 278.87 bits (712), Expect = 1.893e-74
Identity = 128/144 (88.89%), Postives = 137/144 (95.14%), Query Frame = -1
Query:  279 RILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYAMG 710
            RI KEL+DLQ+DPP SCSAGP  +DMF WQATIMGP DSP+AGGVFLVTIHFPPDYPFKPPKVAFRTKV+HPNINSNGSICLDILKEQWSPALT+SKVLLSICSLLTDPNPDDPLVPEIAH+YKTDR KYE+TA+SWTQKYAMG
Sbjct:    5 RINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPFKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAHIYKTDRVKYESTAQSWTQKYAMG 148          
BLAST of CF832579 vs. ExPASy Swiss-Prot
Match: UBC29_ARATH (Ubiquitin carrier protein E2 29 OS=Arabidopsis thaliana GN=UBC29 PE=2 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 2.734e-73
Identity = 125/143 (87.41%), Postives = 134/143 (93.71%), Query Frame = -1
Query:  282 RILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYAM 710
            RILKELK+LQ+DPP SCSAGP  EDMFHWQATIMGP +SPY+GGVFLV IHFPPDYPFKPPKV FRTKVFHPNINSNG+ICLDILK+QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAH+YKTD+ KYE  ARSWTQKYA+
Sbjct:    5 RILKELKELQRDPPVSCSAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDYPFKPPKVVFRTKVFHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHIYKTDKTKYEAMARSWTQKYAL 147          
BLAST of CF832579 vs. ExPASy Swiss-Prot
Match: UBC4_YEAST (Ubiquitin-conjugating enzyme E2 4 OS=Saccharomyces cerevisiae GN=UBC4 PE=1 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 3.458e-68
Identity = 113/143 (79.02%), Postives = 132/143 (92.31%), Query Frame = -1
Query:  282 RILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYAM 710
            RI KEL DL++DPPTSCSAGPV +D++HWQA+IMGP DSPYAGGVF ++IHFP DYPFKPPK++F TK++HPNIN+NG+ICLDILK+QWSPALT+SKVLLSICSLLTD NPDDPLVPEIAH+YKTDR KYE TAR WT+KYA+
Sbjct:    6 RIAKELSDLERDPPTSCSAGPVGDDLYHWQASIMGPADSPYAGGVFFLSIHFPTDYPFKPPKISFTTKIYHPNINANGNICLDILKDQWSPALTLSKVLLSICSLLTDANPDDPLVPEIAHIYKTDRPKYEATAREWTKKYAV 148          
BLAST of CF832579 vs. ExPASy Swiss-Prot
Match: UBC4_SCHPO (Ubiquitin-conjugating enzyme E2 4 OS=Schizosaccharomyces pombe GN=ubc4 PE=2 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 4.517e-68
Identity = 115/143 (80.42%), Postives = 132/143 (92.31%), Query Frame = -1
Query:  282 RILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYETTARSWTQKYAM 710
            RI +EL DL KDPP+SCSAGPV +D+FHWQATIMGP DSPYAGGVF ++IHFP DYPFKPPKV F T+++HPNINSNGSICLDIL++QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAH+YKTDR++YE +AR WT+KYA+
Sbjct:    5 RINRELADLGKDPPSSCSAGPVGDDLFHWQATIMGPADSPYAGGVFFLSIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHVYKTDRSRYELSAREWTRKYAI 147          
The following BLAST results are available for this feature:
BLAST of CF832579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 264
Match NameE-valueIdentityDescription
UBC10_ARATH7.936e-8197.22Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis ... [more]
UBC4_SOLLC1.036e-8097.92Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum ... [more]
UBC9_ARATH1.354e-8096.53SUMO-conjugating enzyme UBC9 OS=Arabidopsis thalia... [more]
UBC28_ARATH3.016e-8096.53Ubiquitin carrier protein E2 28 OS=Arabidopsis tha... [more]
UBC8_ARATH1.955e-7995.83Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis t... [more]
UBC11_ARATH3.334e-7993.75Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis ... [more]
UBC30_ARATH1.893e-7488.89Ubiquitin carrier protein E2 30 OS=Arabidopsis tha... [more]
UBC29_ARATH2.734e-7387.41Ubiquitin carrier protein E2 29 OS=Arabidopsis tha... [more]
UBC4_YEAST3.458e-6879.02Ubiquitin-conjugating enzyme E2 4 OS=Saccharomyces... [more]
UBC4_SCHPO4.517e-6880.42Ubiquitin-conjugating enzyme E2 4 OS=Schizosacchar... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02B10_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832579 ID=CF832579; Name=CF832579; organism=Citrus sinensis; type=EST; length=710bp
TTTTTTTTTTTTTTAGAAAGAAAGATTTTTATCATTCAGAATGGACGTAC
AAATTTGGCTGACCAAGTGACATTATCAGAACACATTTGATTGACCAAAG
TGACATTATCCATACAACAATTAAGAAGCAACCCGTTTCTCCTTTCCAAT
TCGGGGGATGTAGTGGACCTTTCTTATGGTCCACTTTTTAGGATTGAACA
GACAGAATATTCATACATTAACTCGAAACCAGAATTAAAAAGAAAAGGAA
CCCCCTCACACACCATAACCCAGGTTTAGCCCATGGCATACTTCTGGGTC
CAGCTCCTTGCAGTTGTCTCGTACTTGTTCCTGTCGGTCTTGTACATGTG
AGCAATTTCTGGTACCAACGGATCATCGGGATTTGGATCCGTCAATAATG
AACAGATTGATAGCAACACCTTGGAAATGGTAAGAGCAGGACTCCATTGT
TCCTTCAAGATGTCAAGGCAAATGCTCCCATTGCTATTTATGTTAGGATG
AAATACCTTTGTCCTGAATGCTACCTTGGGAGGCTTGAATGGATAGTCTG
GGGGAAAATGGATGGTAACTAGAAAAACACCCCCAGCATACGGACTATCT
GGAGGACCCATGATTGTCGCCTGCCAATGAAACATGTCTTCAGCAACAGG
ACCGGCACTGCATGATGTAGGAGGATCCTTCTGCAAATCTTTGAGCTCCT
TCAAGATCCG
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