CF832602

Overview
NameCF832602
Unique NameCF832602
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length551
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig360 contig Csv1_Contig360:747..1297. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF832602 vs. ExPASy Swiss-Prot
Match: APR1_ARATH (5'-adenylylsulfate reductase 1, chloroplastic OS=Arabidopsis thaliana GN=APR1 PE=1 SV=2)

HSP 1 Score: 159.844 bits (403), Expect = 7.703e-39
Identity = 73/92 (79.35%), Postives = 85/92 (92.39%), Query Frame = -3 
Query:  274 EPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSEKRDVDSLMAFVDALR 549
            EPW+VVLYAPWC FCQAME SY ELADKLAG+G+KV KFRADGDQKE+AKQ+LQLGSFPTIL FPK+SS+PIKYPSEKRDV+SL +F++ +R
Sbjct:  374 EPWIVVLYAPWCPFCQAMEASYDELADKLAGSGIKVAKFRADGDQKEFAKQELQLGSFPTILVFPKNSSRPIKYPSEKRDVESLTSFLNLVR 465
[Close]
BLAST of CF832602 vs. ExPASy Swiss-Prot
Match: APR2_ARATH (5'-adenylylsulfate reductase 2, chloroplastic OS=Arabidopsis thaliana GN=APR2 PE=2 SV=2)

HSP 1 Score: 154.451 bits (389), Expect = 3.236e-37
Identity = 72/92 (78.26%), Postives = 81/92 (88.04%), Query Frame = -3 
Query:  274 EPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSEKRDVDSLMAFVDALR 549
            E WLVVLYAPWC FCQAME SY+ELA+KLAG GVKV KFRADG+QKE+AKQ+LQLGSFPTIL FPK + + IKYPSE RDVDSLM+FV+ LR
Sbjct:  363 EAWLVVLYAPWCPFCQAMEASYIELAEKLAGKGVKVAKFRADGEQKEFAKQELQLGSFPTILLFPKRAPRAIKYPSEHRDVDSLMSFVNLLR 454
[Close]
BLAST of CF832602 vs. ExPASy Swiss-Prot
Match: APR3_ARATH (5'-adenylylsulfate reductase 3, chloroplastic OS=Arabidopsis thaliana GN=APR3 PE=2 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 9.416e-37
Identity = 70/92 (76.09%), Postives = 83/92 (90.22%), Query Frame = -3 
Query:  274 EPWLVVLYAPWCQFCQAMEGSYVELADKLAGNGVKVGKFRADGDQKEYAKQKLQLGSFPTILFFPKHSSKPIKYPSEKRDVDSLMAFVDALR 549
            E W+VVLYAPWC FCQAME S+ ELADKL G+GVKV KFRADGDQK++AK++LQLGSFPTIL FPK+SS+PIKYPSEKRDVDSL +F++ +R
Sbjct:  367 EAWIVVLYAPWCPFCQAMEASFDELADKLGGSGVKVAKFRADGDQKDFAKKELQLGSFPTILVFPKNSSRPIKYPSEKRDVDSLTSFLNLVR 458
The following BLAST results are available for this feature:
BLAST of CF832602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
APR1_ARATH7.703e-3979.355'-adenylylsulfate reductase 1, chloroplastic OS=A... [more]
APR2_ARATH3.236e-3778.265'-adenylylsulfate reductase 2, chloroplastic OS=A... [more]
APR3_ARATH9.416e-3776.095'-adenylylsulfate reductase 3, chloroplastic OS=A... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_02B23_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02B23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832602 ID=CF832602; Name=CF832602; organism=Citrus sinensis; type=EST; length=551bp
TTTTTTTTTTCTCTTTCACCAACAGCTGTTCTCATACTCCTGAAAACAAT
ATTCTAACACACTCCGACTGAAGGAAAATCTTTCCAGAAACGCATTTGAA
AAAATAATTGCAAAAAAGACCCTTACACCAAAAATACACAAAAACGCCCA
AGGTCCATTACAGGCCCCCGGGTTCTAGGGCTGGGAAAAGAAATTTAATT
GTGATGAATTCCAGCTCCTACCACTTTGCATTTTCCAATCGGCTGTATTG
CTGCTAAATCTATGATTCAATTACCGGAGGGCATCCACAAAAGCCATCAG
TGAATCTACATCCCTCTTTTCTGAGGGGTACTTTATCGGCTTCGAAGAGT
GTTTAGGGAAAAATAGTATTGTTGGGAAGCTTCCCAGCTGCAATTTTTGC
TTTGCATATTCCTTCTGGTCACCATCTGCTCTGAACTTGCCCACCTTCAC
ACCATTCCCTGCTAACTTGTCAGCCAGCTCAACATACGATCCTTCCATTG
CCTGGCAGAATTGGCACCATGGGGCATACAGCACAACAAGCCATGGCTCT
T
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