CF832604
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832604 vs. ExPASy Swiss-Prot
Match: EXPA4_ARATH (Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.100e-28 Identity = 56/66 (84.85%), Postives = 61/66 (92.42%), Query Frame = -3 Query: 426 SVKGANTQWLSMSRNWGQNWQSNAQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSGKNFRV 623 SVKG+ T W+S+SRNWGQNWQSNA LVGQALSFRVTGSDRRTSTSWN+ P+NWQFGQTF GKNFRV Sbjct: 192 SVKGSRTGWMSLSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWNMVPSNWQFGQTFVGKNFRV 257
BLAST of CF832604 vs. ExPASy Swiss-Prot
Match: EXPA3_ARATH (Expansin-A3 OS=Arabidopsis thaliana GN=EXPA3 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 2.742e-28 Identity = 56/67 (83.58%), Postives = 61/67 (91.04%), Query Frame = -3 Query: 426 VSVKGANTQWLSMSRNWGQNWQSNAQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSGKNFRV 626 VSVKG+ T W+ MSRNWGQNWQSNA L+GQ+LSFRVT SDRR+STSWNVAPA WQFGQTFSGKNFRV Sbjct: 196 VSVKGSKTDWVRMSRNWGQNWQSNAVLIGQSLSFRVTASDRRSSTSWNVAPATWQFGQTFSGKNFRV 262
BLAST of CF832604 vs. ExPASy Swiss-Prot
Match: EXP16_ARATH (Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.042e-27 Identity = 54/66 (81.82%), Postives = 61/66 (92.42%), Query Frame = -3 Query: 426 SVKGANTQWLSMSRNWGQNWQSNAQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSGKNFRV 623 SVKG+ T W+S++RNWGQNWQSNA LVGQ+LSFRVT SDRRTSTSWN+AP+NWQFGQTF GKNFRV Sbjct: 195 SVKGSKTGWMSLTRNWGQNWQSNAVLVGQSLSFRVTSSDRRTSTSWNIAPSNWQFGQTFVGKNFRV 260
BLAST of CF832604 vs. ExPASy Swiss-Prot
Match: EXPA7_ORYSJ (Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXPA7 PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.777e-27 Identity = 55/66 (83.33%), Postives = 58/66 (87.88%), Query Frame = -3 Query: 426 SVKGANTQWLSMSRNWGQNWQSNAQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSGKNFRV 623 SVKG +T W+ MSRNWGQNWQSN+ LVGQALSFRVTGSDRRTSTSWN APA W FGQTF GKNFRV Sbjct: 199 SVKGTSTGWMPMSRNWGQNWQSNSVLVGQALSFRVTGSDRRTSTSWNAAPAGWHFGQTFEGKNFRV 264
BLAST of CF832604 vs. ExPASy Swiss-Prot
Match: EXPA6_ARATH (Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 3.960e-27 Identity = 52/67 (77.61%), Postives = 61/67 (91.04%), Query Frame = -3 Query: 426 VSVKGANTQWLSMSRNWGQNWQSNAQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSGKNFRV 626 + VKG +T W++MSRNWGQNWQSN+ LVGQ+LSFRVT SDRR+STSWN+APANW+FGQTF GKNFRV Sbjct: 191 LGVKGTHTSWMTMSRNWGQNWQSNSVLVGQSLSFRVTSSDRRSSTSWNIAPANWKFGQTFMGKNFRV 257
BLAST of CF832604 vs. ExPASy Swiss-Prot
Match: EXPA9_ARATH (Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.352e-26 Identity = 54/67 (80.60%), Postives = 61/67 (91.04%), Query Frame = -3 Query: 426 VSVKGANTQWLSMSRNWGQNWQSNAQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSGKNFRV 626 VSVKG+NTQWL +SRNWGQNWQSNA LVGQ+LSFRV SD R+STS N+AP+NWQFGQT+SGKNFRV Sbjct: 192 VSVKGSNTQWLDLSRNWGQNWQSNALLVGQSLSFRVKTSDGRSSTSNNIAPSNWQFGQTYSGKNFRV 258
BLAST of CF832604 vs. ExPASy Swiss-Prot
Match: EXP14_ARATH (Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 8.544e-22 Identity = 47/66 (71.21%), Postives = 53/66 (80.30%), Query Frame = -3 Query: 429 VSVKGANTQWLSMSRNWGQNWQSNAQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSGKNFR 626 VS+KG NT+W SMSRNWGQNWQSNA+L GQALSF+VT SD RT S N P NW FGQT++GK FR Sbjct: 187 VSIKGTNTRWQSMSRNWGQNWQSNAKLDGQALSFKVTTSDGRTVISNNATPRNWSFGQTYTGKQFR 252
BLAST of CF832604 vs. ExPASy Swiss-Prot
Match: EXP15_ARATH (Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=2 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 1.234e-20 Identity = 45/66 (68.18%), Postives = 53/66 (80.30%), Query Frame = -3 Query: 429 VSVKGANTQWLSMSRNWGQNWQSNAQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSGKNFR 626 V+VKG+ T+W MSRNWGQNWQSN L GQALSF+VT SD RT S N+APA+W FGQTF+G+ FR Sbjct: 188 VAVKGSRTRWQQMSRNWGQNWQSNNLLNGQALSFKVTASDGRTVVSNNIAPASWSFGQTFTGRQFR 253
BLAST of CF832604 vs. ExPASy Swiss-Prot
Match: EXP13_ARATH (Expansin-A13 OS=Arabidopsis thaliana GN=EXPA13 PE=2 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 2.327e-19 Identity = 42/65 (64.62%), Postives = 47/65 (72.31%), Query Frame = -3 Query: 432 VSVKGANTQWLSMSRNWGQNWQSNAQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSGKNF 626 V +KG+ T WL M RNWGQNW NA L QALSF VT SDR T TS+NV+P NW +GQTF GK F Sbjct: 199 VKIKGSRTGWLPMGRNWGQNWHINADLRNQALSFEVTSSDRSTVTSYNVSPKNWNYGQTFEGKQF 263
BLAST of CF832604 vs. ExPASy Swiss-Prot
Match: EXP10_ARATH (Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.327e-19 Identity = 42/65 (64.62%), Postives = 51/65 (78.46%), Query Frame = -3 Query: 429 SVKGANTQWLSMSRNWGQNWQSNAQLVGQALSFRVTGSDRRTSTSWNVAPANWQFGQTFSGKNFR 623 ++KG+ T W +MSRNWGQNWQSN+ L GQALSF+VT SD RT S+N APA W +GQTF+G FR Sbjct: 185 AIKGSRTVWQAMSRNWGQNWQSNSYLNGQALSFKVTTSDGRTVVSFNAAPAGWSYGQTFAGGQFR 249 The following BLAST results are available for this feature:
BLAST of CF832604 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832604 ID=CF832604; Name=CF832604; organism=Citrus sinensis; type=EST; length=628bpback to top |