CF832715
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832715 vs. ExPASy Swiss-Prot
Match: CCD4_ARATH (Probable carotenoid cleavage dioxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=CCD4 PE=1 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.165e-27 Identity = 62/115 (53.91%), Postives = 81/115 (70.43%), Query Frame = 2 Query: 401 LTFSRFDANGVKQKDVPILSINRPTFIHDFAITKRFAIFSETQLAV--SAANVMLGKGMPTVFDPEKVPRIGIILKYATSDAEMKWFNVPGFNAMHVFNAW-ENGEDEVVLIATN 736 LT+ RFD+ G KQ+DVPI S+ P+F+HDFAITKR AIF+E QL + + +++L G P D K PR+G+I KYA ++EMKWF VPGFN +H NAW E+ + VVLIA N Sbjct: 309 LTYFRFDSAGKKQRDVPIFSMTSPSFLHDFAITKRHAIFAEIQLGMRMNMLDLVLEGGSPVGTDNGKTPRLGVIPKYAGDESEMKWFEVPGFNIIHAINAWDEDDGNSVVLIAPN 423
BLAST of CF832715 vs. ExPASy Swiss-Prot
Match: ZCD_CROSA (Zeaxanthin 7,8(7',8')-cleavage dioxygenase, chromoplast OS=Crocus sativus GN=ZCD PE=1 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.052e-26 Identity = 57/114 (50.00%), Postives = 83/114 (72.81%), Query Frame = 2 Query: 401 LTFSRFDANGVKQ-KDVPILSINRPTFIHDFAITKRFAIFSETQLAVSAANVMLGKGMPTVFDPEKVPRIGIILKYATSDAEMKWFNVPGFNAMHVFNAW-ENGEDEVVLIATN 736 +T+SR+D +G K DVPI S P+F+HDFAIT+ +A+F + Q+ + A ++ G+ M D EKVPR+G++ +YATSD+EM+WF+VPGFN +HV NAW E G + VV++A N Sbjct: 84 VTYSRYDCDGKKSGPDVPIFSFKEPSFVHDFAITEHYAVFPDIQIVMKPAEIVRGRRMIGP-DLEKVPRLGLLPRYATSDSEMRWFDVPGFNMVHVVNAWEEEGGEVVVIVAPN 196
BLAST of CF832715 vs. ExPASy Swiss-Prot
Match: NCED3_ARATH (9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic OS=Arabidopsis thaliana GN=NCED3 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.128e-16 Identity = 45/112 (40.18%), Postives = 66/112 (58.93%), Query Frame = 2 Query: 401 LTFSRFDANGVKQKDVPILSINRPTFIHDFAITKRFAIFSETQLAVSAANVMLGKGMPTVFDPEKVPRIGIILKYATSDAEMKWFNVPGFNAMHVFNAWENGE-DEVVLIAT 733 L + RF +G K DV I +++PT +HDFAIT+ F + + Q+ ++ G G P V+D KV R GI+ KYA + +KW + P H++NAWE E DEVV+I + Sbjct: 320 LKYFRFSPDGTKSPDVEI-QLDQPTMMHDFAITENFVVVPDQQVVFKLPEMIRG-GSPVVYDKNKVARFGILDKYAEDSSNIKWIDAPDCFCFHLWNAWEEPETDEVVVIGS 429
BLAST of CF832715 vs. ExPASy Swiss-Prot
Match: NCED2_ARATH (9-cis-epoxycarotenoid dioxygenase NCED2, chloroplastic OS=Arabidopsis thaliana GN=NCED2 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.314e-16 Identity = 43/109 (39.45%), Postives = 65/109 (59.63%), Query Frame = 2 Query: 401 LTFSRFDANGVKQKDVPILSINRPTFIHDFAITKRFAIFSETQLAVSAANVMLGKGMPTVFDPEKVPRIGIILKYATSDAEMKWFNVPGFNAMHVFNAWENGEDEVVLI 727 L + RF +GVK ++ I + PT IHDFAIT+ F + + Q+ ++ GK P VFD EKV R+GI+ K AT +++ W N P H++NAWE+ E E +++ Sbjct: 303 LKYFRFSPDGVKSPELEI-PLETPTMIHDFAITENFVVIPDQQVVFKLGEMISGKS-PVVFDGEKVSRLGIMPKDATEASQIIWVNSPETFCFHLWNAWESPETEEIVV 409
BLAST of CF832715 vs. ExPASy Swiss-Prot
Match: NCED1_PHAVU (9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic OS=Phaseolus vulgaris GN=NCED1 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.779e-15 Identity = 44/112 (39.29%), Postives = 63/112 (56.25%), Query Frame = 2 Query: 401 LTFSRFDANGVKQKDVPILSINRPTFIHDFAITKRFAIFSETQLAVSAANVMLGKGMPTVFDPEKVPRIGIILKYATSDAEMKWFNVPGFNAMHVFNAWENGE-DEVVLIAT 733 L + RF A+GVK DV I + PT +HDFAIT+ F + + Q+ ++ G G P V+D K R GI+ K A M+W + P H++NAWE E DE+V+I + Sbjct: 339 LKYFRFSADGVKSPDVEI-PLKEPTMMHDFAITENFVVVPDQQVVFKLTEMITG-GSPVVYDKNKTSRFGILDKNAKDANAMRWIDAPECFCFHLWNAWEEPETDEIVVIGS 448
BLAST of CF832715 vs. ExPASy Swiss-Prot
Match: NCED9_ARATH (9-cis-epoxycarotenoid dioxygenase NCED9, chloroplastic OS=Arabidopsis thaliana GN=NCED9 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.379e-14 Identity = 43/112 (38.39%), Postives = 66/112 (58.93%), Query Frame = 2 Query: 401 LTFSRFDANGVKQKDVPILSINRPTFIHDFAITKRFAIFSETQLAVSAANVMLGKGMPTVFDPEKVPRIGIILKYATSDAEMKWFNVPGFNAMHVFNAWENGE-DEVVLIAT 733 L + RF ++G K DV I +++PT IHDFAIT+ F + + Q+ ++ G G P V+D +K R GI+ K A + ++W VP H++N+WE E DEVV+I + Sbjct: 380 LKYFRFTSDGEKSPDVEI-PLDQPTMIHDFAITENFVVIPDQQVVFRLPEMIRG-GSPVVYDEKKKSRFGILNKNAKDASSIQWIEVPDCFCFHLWNSWEEPETDEVVVIGS 489
BLAST of CF832715 vs. ExPASy Swiss-Prot
Match: NCED5_ARATH (Probable 9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic OS=Arabidopsis thaliana GN=NCED5 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.073e-14 Identity = 43/112 (38.39%), Postives = 64/112 (57.14%), Query Frame = 2 Query: 401 LTFSRFDANGVKQKDVPILSINRPTFIHDFAITKRFAIFSETQLAVSAANVMLGKGMPTVFDPEKVPRIGIILKYATSDAEMKWFNVPGFNAMHVFNAWENGE-DEVVLIAT 733 L + +F G K DV I + PT +HDFAIT+ F + + Q+ +++ LGK P +D EK+ R GI+ + A +EM W P H++NAWE+ E DEVV+I + Sbjct: 310 LKYFKFSPEGEKSPDVEI-PLASPTMMHDFAITENFVVIPDQQVVFKLSDMFLGKS-PVKYDGEKISRFGILPRNAKDASEMVWVESPETFCFHLWNAWESPETDEVVVIGS 419
BLAST of CF832715 vs. ExPASy Swiss-Prot
Match: CCD1_ARATH (Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Arabidopsis thaliana GN=CCD1 PE=1 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 8.941e-14 Identity = 42/109 (38.53%), Postives = 61/109 (55.96%), Query Frame = 2 Query: 401 LTFSRFDANGVKQKDVPILSINRPTFIHDFAITKRFAIFSETQLAVSAANVMLGKGMPTVFDPEKVPRIGIILKYATSDAEMKWFNVPGFNAMHVFNAWENGEDEVVLI 727 LT+ +G+ VPI +I+ P +HDFAIT+ +AIF + + ++ K M FDP K R G++ +YA + ++WF +P H NAWE EDEVVLI Sbjct: 244 LTYRVISKDGIMHDPVPI-TISEPIMMHDFAITETYAIFMDLPMHFRPKEMVKEKKMIYSFDPTKKARFGVLPRYAKDELMIRWFELPNCFIFHNANAWEE-EDEVVLI 350
BLAST of CF832715 vs. ExPASy Swiss-Prot
Match: NCED1_MAIZE (9-cis-epoxycarotenoid dioxygenase 1, chloroplastic OS=Zea mays GN=VP14 PE=1 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.168e-13 Identity = 42/112 (37.50%), Postives = 62/112 (55.36%), Query Frame = 2 Query: 401 LTFSRFDANGVKQKDVPILSINRPTFIHDFAITKRFAIFSETQLAVSAANVMLGKGMPTVFDPEKVPRIGIILKYATSDAEMKWFNVPGFNAMHVFNAWEN-GEDEVVLIAT 733 L + F +G K DV I + +PT IHDFAIT+ + + Q+ ++ G G P V D EK R G++ K+A +EM W +VP H++NAWE+ EVV+I + Sbjct: 321 LKYFYFRPDGTKSDDVEI-PLEQPTMIHDFAITENLVVVPDHQVVFKLQEMLRG-GSPVVLDKEKTSRFGVLPKHAADASEMAWVDVPDCFCFHLWNAWEDEATGEVVVIGS 430
BLAST of CF832715 vs. ExPASy Swiss-Prot
Match: CCD1_PEA (Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Pisum sativum GN=CCD1 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.795e-13 Identity = 40/109 (36.70%), Postives = 60/109 (55.05%), Query Frame = 2 Query: 401 LTFSRFDANGVKQKDVPILSINRPTFIHDFAITKRFAIFSETQLAVSAANVMLGKGMPTVFDPEKVPRIGIILKYATSDAEMKWFNVPGFNAMHVFNAWENGEDEVVLI 727 +T+ +G Q VPI +I+ P +HDFAIT+ ++IF + L ++ K + FD K R G++ +YA D ++WF +P H NAWE EDE+VLI Sbjct: 244 VTYRVISKDGFMQDPVPI-TISDPVMMHDFAITENYSIFMDLPLYFRPKEMVKNKTLIFSFDSTKKARFGVLPRYAKDDKHIRWFELPNCFIFHNANAWEE-EDEIVLI 350 The following BLAST results are available for this feature:
BLAST of CF832715 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832715 ID=CF832715; Name=CF832715; organism=Citrus sinensis; type=EST; length=741bpback to top |