CF832754

Overview
NameCF832754
Unique NameCF832754
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length725
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832754 vs. ExPASy Swiss-Prot
Match: GLO2N_ARATH (Hydroxyacylglutathione hydrolase 2, mitochondrial OS=Arabidopsis thaliana GN=At2g31350 PE=1 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 4.200e-69
Identity = 120/173 (69.36%), Postives = 144/173 (83.24%), Query Frame = -1
Query:  207 DRIPGIDIVLNDGDKWMFAGHEGHVIDTPGHTRGHIRFYFPGSGAVFIGDPLFRLSCGKLFEGTPGQMFFSLQKIMFLPDDTNVYCGHEYTGGNSKFALSIEPNNEALQSYAGHIAQF*SKGVPPIPTTIKMGKSCNPFFCTSSPEIRQSLGIPDTADDSEALGVICQAKDNF 725
            DRIPGID+ L DGDKWMFAGHE HV+DTPGHT+GHI  YFPGS A+F GD +F LSCGKLFEGTP QM  SLQKI  LPDDT++YCGHEYT  NSKFALS+EPNNE LQSYA H+A+  SK +P IPTT+KM K+CNPF  +S+ +IR++L IP+ AD++EALG+I +AKD+F
Sbjct:  152 DRIPGIDMALKDGDKWMFAGHEVHVMDTPGHTKGHISLYFPGSRAIFTGDTMFSLSCGKLFEGTPKQMLASLQKITSLPDDTSIYCGHEYTLSNSKFALSLEPNNEVLQSYAAHVAELRSKKLPTIPTTVKMEKACNPFLRSSNTDIRRALRIPEAADEAEALGIIRKAKDDF 324          
BLAST of CF832754 vs. ExPASy Swiss-Prot
Match: GLO2M_ARATH (Hydroxyacylglutathione hydrolase 1, mitochondrial OS=Arabidopsis thaliana GN=GLX2-1 PE=2 SV=2)

HSP 1 Score: 236.884 bits (603), Expect = 8.483e-62
Identity = 111/173 (64.16%), Postives = 134/173 (77.46%), Query Frame = -1
Query:  207 DRIPGIDIVLNDGDKWMFAGHEGHVIDTPGHTRGHIRFYFPGSGAVFIGDPLFRLSCGKLFEGTPGQMFFSLQKIMFLPDDTNVYCGHEYTGGNSKFALSIEPNNEALQSYAGHIAQF*SKGVPPIPTTIKMGKSCNPFFCTSSPEIRQSLGIPDTADDSEALGVICQAKDNF 725
            DRIPGIDI+L D DKWMFAGHE  ++DTPGHT+GHI FYFPGS  +F GD ++ LSCG L EGTP QM  SLQKI+ LPDDTN+YCG E T GN KFALS+EP NE LQSYA  +A   S+G+P IPTT+K+ K+CNPF   SS +IR+SL IPD+A ++EAL  I +A+D F
Sbjct:  159 DRIPGIDILLKDSDKWMFAGHEVRILDTPGHTQGHISFYFPGSATIFTGDLIYSLSCGTLSEGTPEQMLSSLQKIVSLPDDTNIYCGRENTAGNLKFALSVEPKNETLQSYATRVAHLRSQGLPSIPTTVKVEKACNPFLRISSKDIRKSLSIPDSATEAEALRRIQRARDRF 331          
BLAST of CF832754 vs. ExPASy Swiss-Prot
Match: GLO2_MARMM (Hydroxyacylglutathione hydrolase OS=Maricaulis maris (strain MCS10) GN=gloB PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.078e-40
Identity = 80/172 (46.51%), Postives = 107/172 (62.21%), Query Frame = -1
Query:  207 RIPGIDIVLNDGDKWMFAGHEGHVIDTPGHTRGHIRFYFPGSGAVFIGDPLFRLSCGKLFEGTPGQMFFSLQKIMFLPDDTNVYCGHEYTGGNSKFALSIEPNNEALQSYAGHIAQF*SKGVPPIPTTIKMGKSCNPFFCTSSPEIRQSLGIPDTADDSEALGVICQAKDNF 722
            RIPGI + + DGD      H+  V  TPGHT GH+ ++ P  G  F+GD LF L CG+LFEGTP +M+ SL ++  LPD+T +YC HEYT  N++FALSI+P+N  LQ YA  +    ++G P +PTTI   K+ NPF     P IR  LG+ +  DD E    I + KD+F
Sbjct:   86 RIPGISMEVEDGDVISLGDHKAKVFYTPGHTMGHVCYHMPMDGIAFVGDTLFALGCGRLFEGTPAEMWHSLSRLAALPDETRIYCAHEYTEANARFALSIDPDNHDLQVYAAMVEGERARGEPTVPTTIAAEKAANPFLRPDDPAIRARLGM-EHDDDEEVFAEIRRRKDSF 256          
BLAST of CF832754 vs. ExPASy Swiss-Prot
Match: GLO2_RHIME (Hydroxyacylglutathione hydrolase OS=Rhizobium meliloti GN=gloB PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.537e-37
Identity = 78/172 (45.35%), Postives = 106/172 (61.63%), Query Frame = -1
Query:  207 RIPGIDIVLNDGDKWMFAGHEGHVIDTPGHTRGHIRFYFPGSGAVFIGDPLFRLSCGKLFEGTPGQMFFSLQKIMFLPDDTNVYCGHEYTGGNSKFALSIEPNNEALQSYAGHIAQF*SKGVPPIPTTIKMGKSCNPFFCTSSPEIRQSLGIPDTADDSEALGVICQAKDNF 722
            +IPGID  +  GD++ FAGH   VI+TPGHT GH+ ++ P    +F  D LF L CG+LFEGT   M+ SL ++M LPDDT +Y GHEYT  N+ FA++++P N AL+  A  I +  S G    PTT+ + K  NPF     P+IR  LG+ + A D+     I + KDNF
Sbjct:   86 KIPGIDRTVGHGDRFDFAGHPVDVIETPGHTSGHVCYHLPEDKLLFAADTLFALGCGRLFEGTADTMWQSLSRLMALPDDTAIYFGHEYTLANAHFAITVDPENSALKERAAEIEETRSDGGFTAPTTMGLEKRTNPFLRAGDPKIRALLGM-EKASDAAVFAEIRKRKDNF 256          
BLAST of CF832754 vs. ExPASy Swiss-Prot
Match: GLO2_OCHA4 (Hydroxyacylglutathione hydrolase OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=gloB PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 9.445e-37
Identity = 81/172 (47.09%), Postives = 105/172 (61.05%), Query Frame = -1
Query:  207 RIPGIDIVLNDGDKWMFAGHEGHVIDTPGHTRGHIRFYFPGSGAVFIGDPLFRLSCGKLFEGTPGQMFFSLQKIMFLPDDTNVYCGHEYTGGNSKFALSIEPNNEALQSYAGHIAQF*SKGVPPIPTTIKMGKSCNPFFCTSSPEIRQSLGIPDTADDSEALGVICQAKDNF 722
            +IPGID  + DGD++ F      VI TPGHT G + +Y P + AVF GD LF L CG+LFEGTP  MF SLQK++ LP DT VYCGHEYT  N++FAL+I+P N AL+  A  IA+  +     +P++I +  + NPF       IR  LG+ D A D      I + KD F
Sbjct:   90 KIPGIDRTVKDGDEFTFGLFRVKVIATPGHTAGEVSYYLPDAKAVFTGDTLFALGCGRLFEGTPLTMFQSLQKLVALPGDTAVYCGHEYTESNARFALTIDPANSALKERAAEIARLRAADRMTLPSSIALEMATNPFLRWHDAGIRSRLGLQD-APDEAVFAEIRKRKDMF 260          
BLAST of CF832754 vs. ExPASy Swiss-Prot
Match: GLO2_BRUSU (Hydroxyacylglutathione hydrolase OS=Brucella suis GN=gloB PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.687e-36
Identity = 79/172 (45.93%), Postives = 105/172 (61.05%), Query Frame = -1
Query:  207 RIPGIDIVLNDGDKWMFAGHEGHVIDTPGHTRGHIRFYFPGSGAVFIGDPLFRLSCGKLFEGTPGQMFFSLQKIMFLPDDTNVYCGHEYTGGNSKFALSIEPNNEALQSYAGHIAQF*SKGVPPIPTTIKMGKSCNPFFCTSSPEIRQSLGIPDTADDSEALGVICQAKDNF 722
            +IPGID  +  GD++ F   +  VI TPGHT G I +Y P +  VF GD LF L CG+LFEGTP  MF SL+K++ LP DT +YCGHEYT  N++FAL+I+P+N AL+  A  IA+  +     +P+TI +  + NPF       IR  LG+ D A D      I + KD F
Sbjct:   87 KIPGIDRTVKGGDEFTFGLFKVKVISTPGHTAGGISYYLPDAKVVFTGDTLFALGCGRLFEGTPATMFHSLEKLVALPGDTALYCGHEYTQNNARFALTIDPDNSALKERAKEIARLRAHERMTLPSTIALEMATNPFLRWHDRTIRARLGLQD-APDEAVFAEIRKRKDMF 257          
BLAST of CF832754 vs. ExPASy Swiss-Prot
Match: GLO2_BRUSI (Hydroxyacylglutathione hydrolase OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=gloB PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.687e-36
Identity = 79/172 (45.93%), Postives = 105/172 (61.05%), Query Frame = -1
Query:  207 RIPGIDIVLNDGDKWMFAGHEGHVIDTPGHTRGHIRFYFPGSGAVFIGDPLFRLSCGKLFEGTPGQMFFSLQKIMFLPDDTNVYCGHEYTGGNSKFALSIEPNNEALQSYAGHIAQF*SKGVPPIPTTIKMGKSCNPFFCTSSPEIRQSLGIPDTADDSEALGVICQAKDNF 722
            +IPGID  +  GD++ F   +  VI TPGHT G I +Y P +  VF GD LF L CG+LFEGTP  MF SL+K++ LP DT +YCGHEYT  N++FAL+I+P+N AL+  A  IA+  +     +P+TI +  + NPF       IR  LG+ D A D      I + KD F
Sbjct:   90 KIPGIDRTVKGGDEFTFGLFKVKVISTPGHTAGGISYYLPDAKVVFTGDTLFALGCGRLFEGTPATMFHSLEKLVALPGDTALYCGHEYTQNNARFALTIDPDNSALKERAKEIARLRAHERMTLPSTIALEMATNPFLRWHDRTIRARLGLQD-APDEAVFAEIRKRKDMF 260          
BLAST of CF832754 vs. ExPASy Swiss-Prot
Match: GLO2_BRUO2 (Hydroxyacylglutathione hydrolase OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=gloB PE=3 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 4.687e-36
Identity = 79/172 (45.93%), Postives = 105/172 (61.05%), Query Frame = -1
Query:  207 RIPGIDIVLNDGDKWMFAGHEGHVIDTPGHTRGHIRFYFPGSGAVFIGDPLFRLSCGKLFEGTPGQMFFSLQKIMFLPDDTNVYCGHEYTGGNSKFALSIEPNNEALQSYAGHIAQF*SKGVPPIPTTIKMGKSCNPFFCTSSPEIRQSLGIPDTADDSEALGVICQAKDNF 722
            +IPGID  +  GD++ F   +  VI TPGHT G I +Y P +  VF GD LF L CG+LFEGTP  MF SL+K++ LP DT +YCGHEYT  N++FAL+I+P+N AL+  A  IA+  +     +P+TI +  + NPF       IR  LG+ D A D      I + KD F
Sbjct:   87 KIPGIDRTVKGGDEFTFGLFKVKVISTPGHTAGGISYYLPDAKVVFTGDTLFALGCGRLFEGTPATMFHSLEKLVALPGDTALYCGHEYTQNNARFALTIDPDNSALKERAKEIARLRAHERMTLPSTIALEMATNPFLRWHDRTIRARLGLQD-APDEAVFAEIRKRKDMF 257          
BLAST of CF832754 vs. ExPASy Swiss-Prot
Match: GLO2_BRUME (Hydroxyacylglutathione hydrolase OS=Brucella melitensis GN=gloB PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.687e-36
Identity = 79/172 (45.93%), Postives = 105/172 (61.05%), Query Frame = -1
Query:  207 RIPGIDIVLNDGDKWMFAGHEGHVIDTPGHTRGHIRFYFPGSGAVFIGDPLFRLSCGKLFEGTPGQMFFSLQKIMFLPDDTNVYCGHEYTGGNSKFALSIEPNNEALQSYAGHIAQF*SKGVPPIPTTIKMGKSCNPFFCTSSPEIRQSLGIPDTADDSEALGVICQAKDNF 722
            +IPGID  +  GD++ F   +  VI TPGHT G I +Y P +  VF GD LF L CG+LFEGTP  MF SL+K++ LP DT +YCGHEYT  N++FAL+I+P+N AL+  A  IA+  +     +P+TI +  + NPF       IR  LG+ D A D      I + KD F
Sbjct:   87 KIPGIDRTVKGGDEFTFGLFKVKVISTPGHTAGGISYYLPDAKVVFTGDTLFALGCGRLFEGTPATMFHSLEKLVALPGDTALYCGHEYTQNNARFALTIDPDNSALKERAKEIARLRAHERMTLPSTIALEMATNPFLRWHDRTIRARLGLQD-APDEAVFAEIRKRKDMF 257          
BLAST of CF832754 vs. ExPASy Swiss-Prot
Match: GLO2_BRUMB (Hydroxyacylglutathione hydrolase OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=gloB PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.687e-36
Identity = 79/172 (45.93%), Postives = 105/172 (61.05%), Query Frame = -1
Query:  207 RIPGIDIVLNDGDKWMFAGHEGHVIDTPGHTRGHIRFYFPGSGAVFIGDPLFRLSCGKLFEGTPGQMFFSLQKIMFLPDDTNVYCGHEYTGGNSKFALSIEPNNEALQSYAGHIAQF*SKGVPPIPTTIKMGKSCNPFFCTSSPEIRQSLGIPDTADDSEALGVICQAKDNF 722
            +IPGID  +  GD++ F   +  VI TPGHT G I +Y P +  VF GD LF L CG+LFEGTP  MF SL+K++ LP DT +YCGHEYT  N++FAL+I+P+N AL+  A  IA+  +     +P+TI +  + NPF       IR  LG+ D A D      I + KD F
Sbjct:   90 KIPGIDRTVKGGDEFTFGLFKVKVISTPGHTAGGISYYLPDAKVVFTGDTLFALGCGRLFEGTPATMFHSLEKLVALPGDTALYCGHEYTQNNARFALTIDPDNSALKERAKEIARLRAHERMTLPSTIALEMATNPFLRWHDRTIRARLGLQD-APDEAVFAEIRKRKDMF 260          
The following BLAST results are available for this feature:
BLAST of CF832754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 275
Match NameE-valueIdentityDescription
GLO2N_ARATH4.200e-6969.36Hydroxyacylglutathione hydrolase 2, mitochondrial ... [more]
GLO2M_ARATH8.483e-6264.16Hydroxyacylglutathione hydrolase 1, mitochondrial ... [more]
GLO2_MARMM1.078e-4046.51Hydroxyacylglutathione hydrolase OS=Maricaulis mar... [more]
GLO2_RHIME5.537e-3745.35Hydroxyacylglutathione hydrolase OS=Rhizobium meli... [more]
GLO2_OCHA49.445e-3747.09Hydroxyacylglutathione hydrolase OS=Ochrobactrum a... [more]
GLO2_BRUSU4.687e-3645.93Hydroxyacylglutathione hydrolase OS=Brucella suis ... [more]
GLO2_BRUSI4.687e-3645.93Hydroxyacylglutathione hydrolase OS=Brucella suis ... [more]
GLO2_BRUO24.687e-3645.93Hydroxyacylglutathione hydrolase OS=Brucella ovis ... [more]
GLO2_BRUME4.687e-3645.93Hydroxyacylglutathione hydrolase OS=Brucella melit... [more]
GLO2_BRUMB4.687e-3645.93Hydroxyacylglutathione hydrolase OS=Brucella melit... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_02G04_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02G04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832754 ID=CF832754; Name=CF832754; organism=Citrus sinensis; type=EST; length=725bp
TTTTTTTTTTTTTTTTTCCCCCATAGCCATGGCATTAAACTCAATTCAAA
AAAACATGGAACTTTCAAATAACTTTGGGACAAATGACAAAGTAAAAATT
AAAATTGAAAACAAAAAAAAGGTTAAAATGTATACCTTGGGGGTTTTATT
TCATATTGGCCCCACCTACTCTCTGTACACAAACAATAGTATTTAAAACA
ATCCTAAAAGTTATCCTTTGCTTGACAAATGACACCTAAGGCTTCTGAAT
CATCTGCAGTGTCTGGAATGCCCAATGACTGCCGGATTTCTGGACTTGAC
GTGCAAAAAAATGGATTACATGACTTCCCCATCTTTATTGTTGTTGGAAT
CGGGGGCACCCCCTTGCTTCAAAATTGGGCTATGTGCCCTGCATATGATT
GAAGGGCCTCATTGTTGGGTTCTATGGACAATGCAAATTTTGAATTACCC
CCCGTATATTCATGACCACAATATACATTTGTATCATCTGGCAAAAACAT
TATCTTCTGAAGGGAAAAAAACATCTGCCCAGGGGTTCCTTCAAAAAGCT
TGCCACAGGATAACCTGAACAAGGGGTCCCCAATAAAAACTGCCCCTGAT
CCAGGAAAGTAAAACCTAATATGACCTCGGGTATGGCCAGGCGTATCAAT
CACATGCCCCTCATGACCAGCAAACATCCATTTGTCTCCATCATTCAAAA
CTATATCAATGCCAGGGATCCTATC
back to top