CF832816

Overview
NameCF832816
Unique NameCF832816
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length199
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832816 vs. ExPASy Swiss-Prot
Match: NAT2_ARATH (Nucleobase-ascorbate transporter 2 OS=Arabidopsis thaliana GN=NAT2 PE=2 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 2.412e-25
Identity = 47/65 (72.31%), Postives = 57/65 (87.69%), Query Frame = 2
Query:    2 LLITITVIWAYAHLLTDDGAYEHHPDLTQMNCRTDKANLISSAPWIEIPYPLQWGAPTFDAGHAF 196
            L+I + ++WAYAH+LT  GAY+H P  TQ+NCRTD +NLISSAPWI+IPYPLQWGAP+FDAGHAF
Sbjct:  219 LIIALIIVWAYAHVLTASGAYKHRPHQTQLNCRTDMSNLISSAPWIKIPYPLQWGAPSFDAGHAF 283          
BLAST of CF832816 vs. ExPASy Swiss-Prot
Match: NAT1_ARATH (Nucleobase-ascorbate transporter 1 OS=Arabidopsis thaliana GN=NAT1 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 8.031e-21
Identity = 41/65 (63.08%), Postives = 50/65 (76.92%), Query Frame = 2
Query:    2 LLITITVIWAYAHLLTDDGAYEHHPDLTQMNCRTDKANLISSAPWIEIPYPLQWGAPTFDAGHAF 196
            +LI +T++W YA +LT  GAY   P LTQ +CRTDKANLIS+APW + PYPLQWG PTF  GH+F
Sbjct:  215 ILICVTIVWIYAVILTASGAYRGKPSLTQHSCRTDKANLISTAPWFKFPYPLQWGPPTFSVGHSF 279          
BLAST of CF832816 vs. ExPASy Swiss-Prot
Match: NAT4_ARATH (Nucleobase-ascorbate transporter 4 OS=Arabidopsis thaliana GN=NAT4 PE=2 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 5.755e-19
Identity = 37/65 (56.92%), Postives = 50/65 (76.92%), Query Frame = 2
Query:    2 LLITITVIWAYAHLLTDDGAYEHHPDLTQMNCRTDKANLISSAPWIEIPYPLQWGAPTFDAGHAF 196
            +L TI ++WAYA +LT  GAY+  PD TQ++CRTD++ LIS++PW+ IPYPLQWG P+F    AF
Sbjct:  219 VLFTIAIVWAYAEILTAAGAYDKRPDNTQLSCRTDRSGLISASPWVRIPYPLQWGRPSFHGSDAF 283          
BLAST of CF832816 vs. ExPASy Swiss-Prot
Match: NAT6_ARATH (Nucleobase-ascorbate transporter 6 OS=Arabidopsis thaliana GN=NAT6 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 8.311e-18
Identity = 35/65 (53.85%), Postives = 47/65 (72.31%), Query Frame = 2
Query:    2 LLITITVIWAYAHLLTDDGAYEHHPDLTQMNCRTDKANLISSAPWIEIPYPLQWGAPTFDAGHAF 196
            ++  + ++W YAHLLT  GAY      TQ +CRTD+A +I +APWI +P+P QWGAP+FDAG AF
Sbjct:  225 VIFAVVIVWIYAHLLTVGGAYNGAAPTTQTSCRTDRAGIIGAAPWIRVPWPFQWGAPSFDAGEAF 289          
BLAST of CF832816 vs. ExPASy Swiss-Prot
Match: NAT7_ARATH (Nucleobase-ascorbate transporter 7 OS=Arabidopsis thaliana GN=NAT7 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 2.418e-17
Identity = 35/65 (53.85%), Postives = 48/65 (73.85%), Query Frame = 2
Query:    2 LLITITVIWAYAHLLTDDGAYEHHPDLTQMNCRTDKANLISSAPWIEIPYPLQWGAPTFDAGHAF 196
            ++ ++ ++W YAHLLT  GAY++    TQ +CRTD++ LIS +PWI +PYP QWG PTF AG AF
Sbjct:  231 VIFSVVIVWIYAHLLTVGGAYKNTGVNTQTSCRTDRSGLISGSPWIRVPYPFQWGPPTFHAGEAF 295          
BLAST of CF832816 vs. ExPASy Swiss-Prot
Match: NAT3_ARATH (Nucleobase-ascorbate transporter 3 OS=Arabidopsis thaliana GN=NAT3 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 2.418e-17
Identity = 37/66 (56.06%), Postives = 47/66 (71.21%), Query Frame = 2
Query:    2 LLITITVIWAYAHLLTDDGAYEHHPDLTQMNCRTDKANLISSAPWIEIPYPLQWGAPTFDAGHAFG 199
            LL+ + +IWA+A +LT  GAY +    T+ +CRTD+A L+SSAPWI IPYP QWG P F A H FG
Sbjct:  243 LLVCLAIIWAFAAILTVSGAYNNVSTATKQSCRTDRAFLMSSAPWIRIPYPFQWGTPIFKASHVFG 308          
BLAST of CF832816 vs. ExPASy Swiss-Prot
Match: NAT5_ARATH (Nucleobase-ascorbate transporter 5 OS=Arabidopsis thaliana GN=NAT5 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.492e-16
Identity = 35/65 (53.85%), Postives = 46/65 (70.77%), Query Frame = 2
Query:    2 LLITITVIWAYAHLLTDDGAYEHHPDLTQMNCRTDKANLISSAPWIEIPYPLQWGAPTFDAGHAF 196
            ++ ++ ++W YA  LT  GAY      TQ +CRTD+A LIS+APWI +P+P QWGAP FDAG AF
Sbjct:  221 VIFSVAIVWLYAFFLTLGGAYNGVGTDTQRSCRTDRAGLISAAPWIRVPWPFQWGAPLFDAGEAF 285          
BLAST of CF832816 vs. ExPASy Swiss-Prot
Match: NAT10_ARATH (Putative nucleobase-ascorbate transporter 10 OS=Arabidopsis thaliana GN=NAT10 PE=3 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 5.956e-16
Identity = 32/65 (49.23%), Postives = 45/65 (69.23%), Query Frame = 2
Query:    2 LLITITVIWAYAHLLTDDGAYEHHPDLTQMNCRTDKANLISSAPWIEIPYPLQWGAPTFDAGHAF 196
            +++ I ++W +A LLT  G Y+H    TQ +CRTD+  LI++ PWI IPYP QWG+PTFD   +F
Sbjct:  236 MILCIPLVWLFAQLLTSSGVYDHKSHTTQTSCRTDRTGLITNTPWIYIPYPFQWGSPTFDITDSF 300          
BLAST of CF832816 vs. ExPASy Swiss-Prot
Match: NAT8_ARATH (Nucleobase-ascorbate transporter 8 OS=Arabidopsis thaliana GN=NAT8 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.956e-15
Identity = 32/66 (48.48%), Postives = 51/66 (77.27%), Query Frame = 2
Query:    2 LLITITVIWAYAHLLTDDGAYEHHPDLTQMNCRTDKANLISSAPWIEIPYPLQW-GAPTFDAGHAF 196
            ++ ++ ++W YA++LT  GAY +    TQ++CRTD+A +IS++PWI +P+P+QW GAPTF+AG  F
Sbjct:  231 VIFSVVIVWLYAYILTIGGAYSNTEINTQISCRTDRAGIISASPWIRVPHPIQWGGAPTFNAGDIF 296          
BLAST of CF832816 vs. ExPASy Swiss-Prot
Match: LPE1_MAIZE (Nucleobase-ascorbate transporter LPE1 OS=Zea mays GN=LPE1 PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 2.118e-13
Identity = 27/59 (45.76%), Postives = 39/59 (66.10%), Query Frame = 2
Query:    2 LLITITVIWAYAHLLTDDGAYEHHPDLTQMNCRTDKANLISSAPWIEIPYPLQWGAPTF 178
            +L+T+ +IW YA +LT  GAY     +TQ +CR D++ +I  +PW+  PYP QWG P F
Sbjct:  220 VLVTVVIIWIYAEILTAAGAYNERGPVTQFSCRADRSGIIQGSPWVRFPYPFQWGYPIF 278          
The following BLAST results are available for this feature:
BLAST of CF832816 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
NAT2_ARATH2.412e-2572.31Nucleobase-ascorbate transporter 2 OS=Arabidopsis ... [more]
NAT1_ARATH8.031e-2163.08Nucleobase-ascorbate transporter 1 OS=Arabidopsis ... [more]
NAT4_ARATH5.755e-1956.92Nucleobase-ascorbate transporter 4 OS=Arabidopsis ... [more]
NAT6_ARATH8.311e-1853.85Nucleobase-ascorbate transporter 6 OS=Arabidopsis ... [more]
NAT7_ARATH2.418e-1753.85Nucleobase-ascorbate transporter 7 OS=Arabidopsis ... [more]
NAT3_ARATH2.418e-1756.06Nucleobase-ascorbate transporter 3 OS=Arabidopsis ... [more]
NAT5_ARATH3.492e-1653.85Nucleobase-ascorbate transporter 5 OS=Arabidopsis ... [more]
NAT10_ARATH5.956e-1649.23Putative nucleobase-ascorbate transporter 10 OS=Ar... [more]
NAT8_ARATH2.956e-1548.48Nucleobase-ascorbate transporter 8 OS=Arabidopsis ... [more]
LPE1_MAIZE2.118e-1345.76Nucleobase-ascorbate transporter LPE1 OS=Zea mays ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_02H19_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02H19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832816 ID=CF832816; Name=CF832816; organism=Citrus sinensis; type=EST; length=199bp
TCTCCTCATAACCATTACAGTGATTTGGGCATATGCACACCTCTTGACCG
ACGATGGCGCCTATGAACATCATCCAGATCTTACCCAAATGAATTGCCGA
ACTGACAAGGCCAACCTCATTTCTTCTGCTCCATGGATAGAAATCCCATA
TCCTCTTCAATGGGGAGCTCCTACCTTTGATGCTGGTCATGCTTTTGGG
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