CF832824

Overview
NameCF832824
Unique NameCF832824
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length713
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1296 contig Csv1_Contig1296:847..1558. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832824 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.571e-27
Identity = 65/167 (38.92%), Postives = 99/167 (59.28%), Query Frame = -2
Query:  215 GNKVESTIKYYIVSAIWXXXXXXXXXXXXXXGYCPLDVIQLPSDMQNGIELTLSPYNNST-IVRESTDLNLRFSVLLSGRD-YCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGIYKIVHCPSVCESCVKLCHNVGR-SFEDGVRRLVL 706
            G+++++ ++YY++S+I                 CP  V+Q  SD+ NG  +  S  ++   +VR STD+N+ F  +   RD  C+   +W++DNYD ++GKW++TT G+ G PG  TL +WFK+EK G     YK   CPSVC+SC  LC ++GR S +DG  RL L
Sbjct:   36 GDELQTGVQYYVLSSISGAGGGGLALGRATGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEFVPI---RDRLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGVLG--YKFRFCPSVCDSCTTLCSDIGRHSDDDGQIRLAL 197          
BLAST of CF832824 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 103.219 bits (256), Expect = 1.418e-21
Identity = 59/177 (33.33%), Postives = 90/177 (50.85%), Query Frame = -2
Query:  191 VHGNKVESTIKYYIVSAI--WXXXXXXXXXXXXXXGYCPLDVIQLPSDMQNGIELTLSPYN-NSTIVRESTDLNLRFSVLLSGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGIYKIVHCPSVCESCVKLCHNVGRSFEDGVRRLVLVRDDEPAF 712
            + G K+ +   YYIV  +                   CP  V+Q   ++ +   L   P N    +VR STDLN+ FS  +  R       +W++D YD ++G++F+T GG+ G+PG ET+ +WFK+E+     G YK+V CP+VC SC   C +VG   +   RR + + D   AF
Sbjct:   39 IDGEKLRTGTNYYIVPVLRDHGGGLTVSATTPNGTFVCPPRVVQTRKEVDHDRPLAFFPENPKEDVVRVSTDLNINFSAFMPCR--WTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEEFCG-SGFYKLVFCPTVCGSCKVKCGDVGIYIDQKGRRRLALSDKPFAF 212          
BLAST of CF832824 vs. ExPASy Swiss-Prot
Match: LSPI_CARPA (Latex serine proteinase inhibitor OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.614e-17
Identity = 61/173 (35.26%), Postives = 86/173 (49.71%), Query Frame = -2
Query:  206 VHGNKVESTIKYYIVSAIWXXXXXXXXXXXXXXGY-CPLDVIQLPSDMQNGIELTLSPYNN--STIVRESTDLNLRFSVLLSGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGIYKIVHCPSVCESCVKLCHNVGRSFED-GVRRLVLVRD 712
            + G  V   + Y++VSAIW                 CPL V+Q P D  NG  +  S   N    IV ES DLN++F++ ++    CNE   WKVD +    G W +T GG  G+ G E+  + FK++K G  P  YK   CPS   + +  C+NV   F+   +RRL+L  D
Sbjct:    9 IDGKPVLYGVDYFVVSAIWGAGGGGLTVYGPGNKKKCPLSVVQDPFD--NGEPIIFSAIKNVKDNIVFESVDLNVKFNITIN----CNETTAWKVDRFPGVIG-WTVTLGGEKGYHGFESTHSMFKIKKAG-LPFSYKFHFCPSYPRTRLIPCNNVDIFFDKYRIRRLILTND 173          
BLAST of CF832824 vs. ExPASy Swiss-Prot
Match: DRTI_DELRE (Kunitz-type serine protease inhibitor DrTI OS=Delonix regia PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.052e-12
Identity = 55/180 (30.56%), Postives = 84/180 (46.67%), Query Frame = -2
Query:  176 VHGNKVESTIKYYIVSAIWXXXXXXXXXXXXXXGYCPLDVIQLPSDMQNGIELTLS-PYNNSTIVRESTDLNLRFSVLLSGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGIYKIVHCPSVCESCVKLCHNVGRSFEDGVRRLVLVRDDEPAFPVVLI 712
            + G  V    +YYIVSAI                 CP+ +IQ  SD+Q G+ +  S P  +   +   T+L + F      +  C E   W +      SG+  +  GG + HP  E +  +FK+EK+G+    YK+V CP   +S    C ++G ++E G R LVL   D+  F VV +
Sbjct:    9 IEGYPVFLGSEYYIVSAIIGAGGGGVRPGRTRGSMCPMSIIQEQSDLQMGLPVRFSSPEESQGKIYTDTELEIEFVE----KPDCAESSKWVIVK---DSGEARVAIGGSEDHPQGELVRGFFKIEKLGSL--AYKLVFCP---KSSSGSCSDIGINYE-GRRSLVLKSSDDSPFRVVFV 175          
The following BLAST results are available for this feature:
BLAST of CF832824 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
ASP_THECC6.571e-2738.9221 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU1.418e-2133.33Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
LSPI_CARPA3.614e-1735.26Latex serine proteinase inhibitor OS=Carica papaya... [more]
DRTI_DELRE2.052e-1230.56Kunitz-type serine protease inhibitor DrTI OS=Delo... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_02I01_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02I01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832824 ID=CF832824; Name=CF832824; organism=Citrus sinensis; type=EST; length=713bp
TTTTTTTTTCACCTTTAGTAGAATTTATTAACCCCGAAAGGATCACAGGG
TACTTATTCATAATTTTAATCCTAGAGATTAAAGAGCAGCTAGCCTGGTC
CGTTATTTAGAATAATAATACCGCTAGCTGGTTAGGGTACATTGATTACA
CAGACGTTGATCTTTCTGTAGCGGGAATTAACACAACAGGAAATGCCGGC
TCATCATCACGAACCAGAACCAGACGTCGAACGCCATCCTCAAACGAACG
GCCAACGTTGTGGCAGAGTTTGACACAAGACTCGCAAACGGATGGACAAT
GAACGATTTTGTATATACCTGGAAAATTTCCAATTTTCTCAAGCTTAAAC
CAATTTAGCAAAGTTTCAGCTCCAGGGTGACCATCAAGTCCCCCGGTTGT
TATAAACCATTTGCCTGATGCCGCGTCATAATTATCAACTTTCCACAACG
GTTGTTCGTTACAATAGTCACGTCCAGATAGCAACACTGAGAATCTCAAG
TTGAGATCAGTGGATTCTCGGACAATTGTAGAATTGTTATACGGTGACAG
TGTTAATTCGATTCCATTTTGCATATCAGAAGGTAACTGGATAACGTCCA
GCGGACAATATCCGTTTCTGCCACCGTGTAGGCTAACTCCACCACCGCCA
GCTCCCCAGATGGCTGAGACTATGTAGTACTTAATGGTGGATTCGACCTT
GTTGCCGTGGACA
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