CF832837
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832837 vs. ExPASy Swiss-Prot
Match: FER3_ARATH (Ferredoxin-3, chloroplastic OS=Arabidopsis thaliana GN=FD3 PE=1 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 7.213e-43 Identity = 90/155 (58.06%), Postives = 118/155 (76.13%), Query Frame = -2 Query: 123 MSTVRLPTSCLFQAAPRSK---KFFLVKS-PASLGSTRSVFKAFGLKCF--SFKASAMAVYKVKLIGPNGEENEFDAPDDAYIIDFAEDAGMELPYSCRGGACFTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCGIYPPKEFELY 569 M+TVR+ ++ + +A RS+ K KS S+GST+ V ++FGLKC S A+ AVYKVKL+GP+G+E+EF+ DD YI+D AE+AG++LPYSCR GAC TCAGQ+VSG+VDQSDGSFL+D +EKG+VLTCVAYP SDC I+ KE EL+ Sbjct: 1 MATVRISSTSMTKAVLRSQTTNKLITNKSYNLSVGSTKRVSRSFGLKCSANSGGATMSAVYKVKLLGPDGQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNVDQSDGSFLEDSHLEKGYVLTCVAYPQSDCVIHTHKETELF 155
BLAST of CF832837 vs. ExPASy Swiss-Prot
Match: FER3_MAIZE (Ferredoxin-3, chloroplastic OS=Zea mays GN=FDX3 PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 9.420e-43 Identity = 93/152 (61.18%), Postives = 107/152 (70.39%), Query Frame = -2 Query: 123 MSTVRLPTSCLFQAAPRSKKFF--LVKSPASLGSTRSVFKAFGLKCFS-FKASAMAVYKVKLIGPNGEENEFDAPDDAYIIDFAEDAGMELPYSCRGGACFTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCGIYPPKEFELY 569 MST TSC R+ + VKSP+SL V K LK SAMAVYKVKL+GP GEE+EFDAPDDAYI+D AE AG+ELPYSCR GAC TCAG++ SGSVDQSDGSFLDD Q E+G+VLTCV+YP SDC I+ KE +LY Sbjct: 1 MSTSTFATSCTLLGNVRTTQASQTAVKSPSSLSFFSQVTKVPSLKTSKKLDVSAMAVYKVKLVGPEGEEHEFDAPDDAYILDAAETAGVELPYSCRAGACSTCAGKIESGSVDQSDGSFLDDGQQEEGYVLTCVSYPKSDCVIHTHKEGDLY 152
BLAST of CF832837 vs. ExPASy Swiss-Prot
Match: FER2_RAPSA (Ferredoxin, root R-B2 OS=Raphanus sativus PE=1 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.115e-35 Identity = 69/97 (71.13%), Postives = 80/97 (82.47%), Query Frame = -2 Query: 123 AVYKVKLIGPNGEENEFDAPDDAYIIDFAEDAGMELPYSCRGGACFTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCGIYPPKEFELY 413 AVYKVKLIGP GEENEF+ DD +I+D AE+AG++LPYSCR GAC TCAGQ+V G VDQS+GSFL+D EKGFVLTCVAYP SDC I+ KE EL+ Sbjct: 2 AVYKVKLIGPEGEENEFEVQDDQFILDAAEEAGVDLPYSCRAGACSTCAGQIVKGQVDQSEGSFLEDDHFEKGFVLTCVAYPQSDCVIHTHKETELF 98
BLAST of CF832837 vs. ExPASy Swiss-Prot
Match: FER1_RAPSA (Ferredoxin, root R-B1 OS=Raphanus sativus PE=1 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 5.536e-35 Identity = 68/97 (70.10%), Postives = 80/97 (82.47%), Query Frame = -2 Query: 123 AVYKVKLIGPNGEENEFDAPDDAYIIDFAEDAGMELPYSCRGGACFTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCGIYPPKEFELY 413 AVYKVKLIGP+G+ENEFD PDD YI+D AE+AG++LPYSCR GAC TCAG++ G VDQSDGSFL+D EKG+VLTCVAYP SD I+ KE EL+ Sbjct: 2 AVYKVKLIGPDGQENEFDVPDDQYILDAAEEAGVDLPYSCRAGACSTCAGKIEKGQVDQSDGSFLEDHHFEKGYVLTCVAYPQSDLVIHTHKEEELF 98
BLAST of CF832837 vs. ExPASy Swiss-Prot
Match: FER6_MAIZE (Ferredoxin-6, chloroplastic OS=Zea mays GN=FDX6 PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 7.993e-34 Identity = 70/121 (57.85%), Postives = 93/121 (76.86%), Query Frame = -2 Query: 123 GSTRSVFKAFGLKCFS-FKASAMAV-YKVKLIGPNGEENEFDAPDDAYIIDFAEDAGMELPYSCRGGACFTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCGIYPPKEFELY 479 G R +A G + S F ASA AV +KVKL+GP+G E+EF+APDD YI++ AE AG+ELP+SCR G+C TCAG+M +G VDQS+GSFLDD QM +G++LTC++YP +DC I+ KE +LY Sbjct: 35 GHARQAARASGPRLSSRFVASAAAVLHKVKLVGPDGTEHEFEAPDDTYILEAAETAGVELPFSCRAGSCSTCAGRMSAGEVDQSEGSFLDDGQMAEGYLLTCISYPKADCVIHTHKEEDLY 155
BLAST of CF832837 vs. ExPASy Swiss-Prot
Match: FER_THEVL (Ferredoxin-1 OS=Thermosynechococcus vulcanus GN=petF1 PE=3 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 9.771e-32 Identity = 62/98 (63.27%), Postives = 75/98 (76.53%), Query Frame = -2 Query: 123 MAVYKVKLIGPNGEENEFDAPDDAYIIDFAEDAGMELPYSCRGGACFTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCGIYPPKEFELY 416 MA YKV L+ P+G E D P+D YI+D AE+ G++LP+SCR GAC TCAG+++ G VDQSD SFLDD Q+EKGFVLTCVAYP SDC I +E ELY Sbjct: 1 MATYKVTLVRPDGSETTIDVPEDEYILDVAEEQGLDLPFSCRAGACSTCAGKLLEGEVDQSDQSFLDDDQIEKGFVLTCVAYPRSDCKILTNQEEELY 98
BLAST of CF832837 vs. ExPASy Swiss-Prot
Match: FER_THEEB (Ferredoxin-1 OS=Thermosynechococcus elongatus (strain BP-1) GN=petF1 PE=1 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 9.771e-32 Identity = 62/98 (63.27%), Postives = 75/98 (76.53%), Query Frame = -2 Query: 123 MAVYKVKLIGPNGEENEFDAPDDAYIIDFAEDAGMELPYSCRGGACFTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCGIYPPKEFELY 416 MA YKV L+ P+G E D P+D YI+D AE+ G++LP+SCR GAC TCAG+++ G VDQSD SFLDD Q+EKGFVLTCVAYP SDC I +E ELY Sbjct: 1 MATYKVTLVRPDGSETTIDVPEDEYILDVAEEQGLDLPFSCRAGACSTCAGKLLEGEVDQSDQSFLDDDQIEKGFVLTCVAYPRSDCKILTNQEEELY 98
BLAST of CF832837 vs. ExPASy Swiss-Prot
Match: FER_SYNEN (Ferredoxin-1 OS=Synechococcus elongatus naegeli GN=petF1 PE=3 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 9.771e-32 Identity = 62/98 (63.27%), Postives = 75/98 (76.53%), Query Frame = -2 Query: 123 MAVYKVKLIGPNGEENEFDAPDDAYIIDFAEDAGMELPYSCRGGACFTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCGIYPPKEFELY 416 MA YKV L+ P+G E D P+D YI+D AE+ G++LP+SCR GAC TCAG+++ G VDQSD SFLDD Q+EKGFVLTCVAYP SDC I +E ELY Sbjct: 1 MATYKVTLVRPDGSETTIDVPEDEYILDVAEEQGLDLPFSCRAGACSTCAGKLLEGEVDQSDQSFLDDDQIEKGFVLTCVAYPRSDCKILTNQEEELY 98
BLAST of CF832837 vs. ExPASy Swiss-Prot
Match: FER1_NOSMU (Ferredoxin-1 OS=Nostoc muscorum PE=1 SV=2) HSP 1 Score: 136.346 bits (342), Expect = 1.276e-31 Identity = 64/96 (66.67%), Postives = 74/96 (77.08%), Query Frame = -2 Query: 123 VYKVKLIGPNGEENEFDAPDDAYIIDFAEDAGMELPYSCRGGACFTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCGIYPPKEFELY 410 VYKV L+ G E D PDD YI+D AED G++LPYSCR GAC TCAG++VSG+VDQSD SFLDD Q+EKG+VLTCVAYPTSD I KE +LY Sbjct: 4 VYKVTLVDQEGTETTIDVPDDEYILDIAEDQGLDLPYSCRAGACSTCAGKIVSGTVDQSDQSFLDDDQIEKGYVLTCVAYPTSDLKIETHKEEDLY 99
BLAST of CF832837 vs. ExPASy Swiss-Prot
Match: FER1_PEA (Ferredoxin-1, chloroplastic OS=Pisum sativum GN=PETF PE=1 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 2.177e-31 Identity = 73/127 (57.48%), Postives = 92/127 (72.44%), Query Frame = -2 Query: 126 PASLGSTRSVFKAF-GLKCFSFK----ASAMAVYKVKLIGPNGEENEFDAPDDAYIIDFAEDAGMELPYSCRGGACFTCAGQMVSGSVDQSDGSFLDDKQMEKGFVLTCVAYPTSDCGIYPPKEFEL 491 P S+ +T++ F GLK S K A AMA YKVKL+ P+G + EF+ P D YI+D AE+ G++LPYSCR G+C +CAG++V G VDQSDGSFLDD+Q+E GFVLTCVAYPTSD I KE +L Sbjct: 23 PMSVTTTKAFSNGFLGLKT-SLKRGDLAVAMASYKVKLVTPDGTQ-EFECPSDVYILDHAEEVGIDLPYSCRAGSCSSCAGKVVGGEVDQSDGSFLDDEQIEAGFVLTCVAYPTSDVVIETHKEEDL 147 The following BLAST results are available for this feature:
BLAST of CF832837 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 109
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832837 ID=CF832837; Name=CF832837; organism=Citrus sinensis; type=EST; length=648bpback to top |