CF832849

Overview
NameCF832849
Unique NameCF832849
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length727
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10176 contig Csv1_Contig10176:203..929. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832849 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.083e-14
Identity = 55/164 (33.54%), Postives = 79/164 (48.17%), Query Frame = -1
Query:  233 TNGQCPLDVIQLSFPSERGDNLRLLPYDNYK-IVKVSTDVNLRFPVKVFVKPCNEEPLWKVDSYDDPL----IVTGGSEGPPGAETLLNWFKIEKAGNFSYGGVYNIVHCPSVCLFCPRRCNKIGVSIKDGVGRLLLVGDHEPALNVLFFPSEESSRVLQAANA 709
            T   CP  V+Q     + G  +     D+   +V+VSTDVN+ F V +  + C+   +W++D+YD+      + T G +G PG  TL +WFKIEKAG       Y    CPSVC  C   C+ IG    D     L + D+E A    +   + S  + Q  NA
Sbjct:   65 TGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEF-VPIRDRLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGVLG----YKFRFCPSVCDSCTTLCSDIGRHSDDDGQIRLALSDNEWA----WMFKKASKTIKQVVNA 219          
BLAST of CF832849 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 77.7962 bits (190), Expect = 6.638e-14
Identity = 48/139 (34.53%), Postives = 71/139 (51.08%), Query Frame = -1
Query:  305 CPLDVIQLSFPSERGDNLRLLPYDNYK--IVKVSTDVNLRFPVKVFVKPCN--EEPLWKVDSYDDP----LIVTGGSEGPPGAETLLNWFKIEKAGNFSYGGVYNIVHCPSVCLFCPRRCNKIGVSIKDGVGRLLLVGD 697
            CP  V+Q     +    L   P +N K  +V+VSTD+N+ F   +   PC      +W++D YD+      +  GG +G PG ET+ +WFKIE+   F   G Y +V CP+VC  C  +C  +G+ I     R L + D
Sbjct:   76 CPPRVVQTRKEVDHDRPLAFFP-ENPKEDVVRVSTDLNINFSAFM---PCRWTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEE---FCGSGFYKLVFCPTVCGSCKVKCGDVGIYIDQKGRRRLALSD 207          
The following BLAST results are available for this feature:
BLAST of CF832849 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ASP_THECC5.083e-1433.5421 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU6.638e-1434.53Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_02I20_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02I20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832849 ID=CF832849; Name=CF832849; organism=Citrus sinensis; type=EST; length=727bp
TTTTTTTTTTTTTTTTTAAGCACTGCCATTACGTATGCATGGAGACTTAA
AAAATGTATACATAACCTGAGTAAAGATTAACAACAGCAAAAGGATCACA
GGCGGGGTTATTTTTATTCTGTAATAAAAATAAAAGGTTACTAGCCTGGT
CTATTATTTAAAATGATACAGCTAAGTTCATTCATTACGCGGTCATTGAT
ATTGCTTCAGCAGCTTCAAAAAACCTTGATATTGCGTTAGCAGCTTGAAG
TACCCTTGAGCTTTCCTCTGATGGAAAAAACAAAACATTCAAAGCCGGTT
CATGATCACCAACTAAAAGCAAACGTCCAACCCCATCCTTAATTGAAACC
CCAATTTTGTTGCAGCGTCTAGGACAAAATAAACAGACACTCGGACAATG
GACAATATTGTATACCCCACCATATGAAAAATTTCCAGCTTTCTCAATCT
TAAACCAATTTAGCAACGTTTCAGCTCCTGGGGGGCCCTCACTTCCGCCG
GTTACAATTAATGGATCGTCATAGCTATCAACTTTCCACAATGGTTCTTC
ATTACAGGGCTTAACAAAAACTTTTACGGGGAATCTCAGGTTGACATCAG
TGGATACCTTGACAATTTTGTAATTGTCGTACGGAAGTAATCTTAAATTA
TCTCCCCTTTCGCTAGGAAAACTTAATTGGATAACGTCCAAGGGACACTG
TCCATTTGTGCCTAGGTGTGTGCTGAA
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