CF832858
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832858 vs. ExPASy Swiss-Prot
Match: SPE1_PEA (Arginine decarboxylase OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.157e-37 Identity = 80/138 (57.97%), Postives = 92/138 (66.67%), Query Frame = -2 Query: 308 GPSVVRVLQSDGPHSFAVTRAMPGPSCGDVLRVMQHEPELMFETLKHRAEEYCGQEHXXXXXXXXXXXXXXGMVNNSALASSLAQYFHSMPYLVVPSSCSLTAINNGGGLYYCNGEDYDA----VVDSSPNEDEQWSY 709 GPSVVRVLQSDGPH FAVTRA+ G SC DVLRVMQHEP+LMFETLKHRA E+CGQ +VN LA+SLAQ F +MPYLV ++C L A+ N G YYC+G+D+ A V S EDE WSY Sbjct: 603 GPSVVRVLQSDGPHGFAVTRAVAGSSCADVLRVMQHEPQLMFETLKHRALEFCGQH------------DDDSVVNAGVLANSLAQSFDNMPYLVSSTTCCLNALTNNNGFYYCSGDDFSADTVSVATSVAGEDENWSY 728
BLAST of CF832858 vs. ExPASy Swiss-Prot
Match: SPE1_SOYBN (Arginine decarboxylase OS=Glycine max PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.528e-26 Identity = 67/134 (50.00%), Postives = 80/134 (59.70%), Query Frame = -2 Query: 308 GPSVVRVLQSDGPHSFAVTRAMPGPSCGDVLRVMQHEPELMFETLKHRAEEYCGQEHXXXXXXXXXXXXXXGMVNNSALASSLAQYFHSMPYLVVPSSCSLTAINNGGGLYYCNGEDYDAVVDSSPNEDEQWSY 709 GPSVVRV QSDGPHSFAVTRA+PGPSCGDVLRVMQH+PELMFETLKHRA+EY ++ + LA+ LA+ F MPYL+ SS +D A V ++ + EQWSY Sbjct: 590 GPSVVRVSQSDGPHSFAVTRAVPGPSCGDVLRVMQHQPELMFETLKHRAQEYVSHDNAA-----------------ALLAAGLARTFDRMPYLLSLSSFV--------------ADDVAAAVPAAQDLGEQWSY 692
BLAST of CF832858 vs. ExPASy Swiss-Prot
Match: SPE1_DIACA (Arginine decarboxylase OS=Dianthus caryophyllus GN=ADC PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.528e-26 Identity = 71/145 (48.97%), Postives = 84/145 (57.93%), Query Frame = -2 Query: 299 GPSVVRVLQSDGPHSFAVTRAMPGPSCGDVLRVMQHEPELMFETLKHRAEEYCGQEHXXXXXXXXXXXXXXGMVNNSALASSLAQYFHSMPYLVVPSSCSLTAINNGGGL------YYCNGED--YDAVVDSSPNEDEQWSYCYA 709 GPSVVRV QSDGP S+AVTRA+PGPS DVLRVM HEPELMF+TLKHRAEE C ++ LA LAQ F+S PYLV + +NG GL Y+ +D A VD++ E+EQWSY A Sbjct: 599 GPSVVRVQQSDGPQSYAVTRAVPGPSSSDVLRVMHHEPELMFQTLKHRAEE-CDNDY-----------------TAGPLADMLAQSFNSTPYLVPGHATGSCGFSNGSGLVNGCREYFYGVDDGCNAAAVDAAAGEEEQWSYVCA 725
BLAST of CF832858 vs. ExPASy Swiss-Prot
Match: SPE1_ARATH (Arginine decarboxylase 1 OS=Arabidopsis thaliana GN=SPE1 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.729e-25 Identity = 68/135 (50.37%), Postives = 81/135 (60.00%), Query Frame = -2 Query: 308 GPSVVRVLQSDGPHSFAVTRAMPGPSCGDVLRVMQHEPELMFETLKHRAEEYCGQEHXXXXXXXXXXXXXXGMVNNSALASSLAQYFHSMPYLVVPSSC-SLTAINNGGGLYYCNGEDYDAVVDSSPNEDEQWSY 709 GPSVVRVLQSDGPH FAVTRA+ G S DVLR MQHEPELMF+TLKHRAEE + + +AS LA+ F++MPYL + +S +LTA N G+YYC D A +DE WSY Sbjct: 578 GPSVVRVLQSDGPHGFAVTRAVMGQSSADVLRAMQHEPELMFQTLKHRAEEPRNNNNKACGDKGN---------DKLVVASCLAKSFNNMPYLSMETSTNALTAAVNNLGVYYC---DEAAAGGGGKGKDENWSY 700
BLAST of CF832858 vs. ExPASy Swiss-Prot
Match: SPE2_ARATH (Arginine decarboxylase 2 OS=Arabidopsis thaliana GN=SPE2 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.918e-24 Identity = 65/124 (52.42%), Postives = 76/124 (61.29%), Query Frame = -2 Query: 347 GPSVVRVLQSDGPHSFAVTRAMPGPSCGDVLRVMQHEPELMFETLKHRAEEYCGQEHXXXXXXXXXXXXXXGMVNNSALASSLAQYFHSMPYLVVPS---SCSLTAINNGGGLYYCNGEDYDAV 709 GPSVVRV QSDGPHSFAVTRA+PG S DVLR MQHEPELMF+TLKHRAEE NN +A+SL + FH+MPYL S SL+A + G YYC+ + YD + Sbjct: 590 GPSVVRVSQSDGPHSFAVTRAVPGQSSADVLRAMQHEPELMFQTLKHRAEEM--MHTKGGSEGENEEEEEDDEFNN--VAASLDRSFHNMPYLATEQASPSNSLSAAISNLGFYYCDEDVYDYI 709
BLAST of CF832858 vs. ExPASy Swiss-Prot
Match: SPE1_BRAJU (Arginine decarboxylase OS=Brassica juncea GN=ADC1 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.228e-21 Identity = 66/138 (47.83%), Postives = 81/138 (58.70%), Query Frame = -2 Query: 308 GPSVVRVLQSDGPHSFAVTRAMPGPSCGDVLRVMQHEPELMFETLKHRAEEYCGQEHXXXXXXXXXXXXXXGMVNNSALASSLAQYFHSMPYLVVPSSCS--LTAINNGGGLYYCNGEDYDAVVDSSP--NEDEQWSY 709 GPSVVRVLQ DGPH FAVTRAM G S DVLR MQHEPELMF+TLKHRAEE N+ +AS LA+ F++MPYL V +S + AINN +YY + +A V + ++ +WSY Sbjct: 579 GPSVVRVLQKDGPHGFAVTRAMMGQSSADVLRAMQHEPELMFQTLKHRAEE-----------LSLVHKPGGDKGNDKLVASCLARSFNNMPYLSVGTSTNALTAAINN--LVYYSD----EAAVGNGGGCGKNGKWSY 699
BLAST of CF832858 vs. ExPASy Swiss-Prot
Match: SPE1_ORYSJ (Arginine decarboxylase OS=Oryza sativa subsp. japonica GN=ADC1 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.513e-18 Identity = 52/134 (38.81%), Postives = 69/134 (51.49%), Query Frame = -2 Query: 308 GPSVVRVLQSDGPHSFAVTRAMPGPSCGDVLRVMQHEPELMFETLKHRAEEYCGQEHXXXXXXXXXXXXXXGMVNNSALASSLAQYFHSMPYLVVPSSCSLTAINNGGGLYYCNGEDYDAVVDSSPNEDEQWSY 709 GPSVVRV QSDGPH FAVTRA GPSC DVLR MQHEPE+MFE LK R + A A++LA+ F +MPYL + A G+ + + + ++ +D++W + Sbjct: 592 GPSVVRVSQSDGPHCFAVTRAAAGPSCADVLRSMQHEPEVMFEVLKQRTD--------------------------GATAAALARAFGAMPYLSFDPEAAAMASGESSGM---SSDSEGSAAGAAEEDDDEWEF 696 The following BLAST results are available for this feature:
BLAST of CF832858 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF832858 ID=CF832858; Name=CF832858; organism=Citrus sinensis; type=EST; length=710bpback to top |