CF832861

Overview
NameCF832861
Unique NameCF832861
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length787
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1518 contig Csv1_Contig1518:496..1282. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF832861 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 3.819e-58
Identity = 106/199 (53.27%), Postives = 139/199 (69.85%), Query Frame = -3 
Query:  189 YLGVDSRFNDVFNNGMLSHTSIVMEKVLESYKGFEHVKKLVDVXXXXXXXLNMIISKYPHIKGINYDLSYVIKDAPSYPGIEHVGGDMFESIPEADIIFMKWMLHNFDDEQPLKLLKNCYKALPDGGKLLNINSPISEVPQNSAASREISILDTILLIQIPHGRERPNQEYNELAIKAGFKGVSYECGVCNLYVMEFLK 785
            Y G D RFN VFN GM  H++I M+K+LE+Y GFE +K LVDV       +N I+SKYP IKGIN+DL +VI+DAPSYPG+EHVGGDMF SIP+AD +FMKW+ H++ DE  LK LKNCY+ALPD GK++     +   P +S A++ +  +D I+L   P G+ER  +E+ +LA  AGF+G    C   N Y+MEFLK
Sbjct:  165 YHGTDPRFNKVFNKGMSDHSTITMKKILETYTGFEGLKSLVDVGGGTGAVINTIVSKYPTIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSIPKADAVFMKWICHDWSDEHCLKFLKNCYEALPDNGKVIVAECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTQKEFEDLAKGAGFQGFKVHCNAFNTYIMEFLK 363
[Close]
BLAST of CF832861 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 5.514e-57
Identity = 106/199 (53.27%), Postives = 137/199 (68.84%), Query Frame = -3 
Query:  189 YLGVDSRFNDVFNNGMLSHTSIVMEKVLESYKGFEHVKKLVDVXXXXXXXLNMIISKYPHIKGINYDLSYVIKDAPSYPGIEHVGGDMFESIPEADIIFMKWMLHNFDDEQPLKLLKNCYKALPDGGKLLNINSPISEVPQNSAASREISILDTILLIQIPHGRERPNQEYNELAIKAGFKGVSYECGVCNLYVMEFLK 785
            Y G D RFN VFN GM  H++I M+K+LE+YKGFE +  +VDV       LNMI+SKYP IKGIN+DL +VI+DAP YPG+EHVGGDMF S+P+ D IFMKW+ H++ DE  LK LKNCY ALPD GK++     +   P +S A++ +  +D I+L   P G+ER  QE+  LA  AGF+G +  C   N YV+EFLK
Sbjct:  165 YHGTDPRFNKVFNRGMADHSTITMKKILETYKGFEGLTSVVDVGGGTGAVLNMIVSKYPSIKGINFDLPHVIEDAPQYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCYAALPDNGKVILGECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTEQEFQALAKGAGFQGFNVACSAFNTYVIEFLK 363
[Close]
BLAST of CF832861 vs. ExPASy Swiss-Prot
Match: COMT1_ROSCH (Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.095e-56
Identity = 102/199 (51.26%), Postives = 136/199 (68.34%), Query Frame = -3 
Query:  189 YLGVDSRFNDVFNNGMLSHTSIVMEKVLESYKGFEHVKKLVDVXXXXXXXLNMIISKYPHIKGINYDLSYVIKDAPSYPGIEHVGGDMFESIPEADIIFMKWMLHNFDDEQPLKLLKNCYKALPDGGKLLNINSPISEVPQNSAASREISILDTILLIQIPHGRERPNQEYNELAIKAGFKGVSYECGVCNLYVMEFLK 785
            Y G D RFN VFN GM  H++I M+K+LE+YKGFE +  +VDV       +NMI+SKYP IKGIN+DL +VI+DAP YPG++HVGGDMF S+P+ D IFMKW+ H++ DE  LK LKNCY ALPD GK++     +   P  S A++ +  +D ++L   P G+ER  QE+  LA  +GF+G+   C   N YV+EFLK
Sbjct:  165 YHGTDPRFNKVFNKGMADHSTITMKKILETYKGFEGLTSIVDVGGGTGAVVNMIVSKYPSIKGINFDLPHVIEDAPQYPGVQHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCYAALPDNGKVILGECILPVAPDTSLATKGVVHIDVVMLAHNPGGKERTEQEFEALAKGSGFQGIRVACNAFNTYVIEFLK 363
[Close]
BLAST of CF832861 vs. ExPASy Swiss-Prot
Match: OMT1_ARATH (Quercetin 3-O-methyltransferase 1 OS=Arabidopsis thaliana GN=OMT1 PE=1 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.150e-54
Identity = 99/199 (49.75%), Postives = 141/199 (70.85%), Query Frame = -3 
Query:  189 YLGVDSRFNDVFNNGMLSHTSIVMEKVLESYKGFEHVKKLVDVXXXXXXXLNMIISKYPHIKGINYDLSYVIKDAPSYPGIEHVGGDMFESIPEADIIFMKWMLHNFDDEQPLKLLKNCYKALPDGGKLLNINSPISEVPQNSAASREISILDTILLIQIPHGRERPNQEYNELAIKAGFKGVSYECGVCNLYVMEFLK 785
            Y G D RFN VFNNGM +H++I M+K+LE+YKGFE +  LVDV       L MI+SKYP++KGIN+DL +VI+DAPS+PGIEHVGGDMF S+P+ D IFMKW+ H++ DE  +K LKNCY++LP+ GK++     + E P +S +++++  +D I+L   P G+ER  +E+  LA  +GFKG+   C    + ++E LK
Sbjct:  163 YHGTDPRFNKVFNNGMSNHSTITMKKILETYKGFEGLTSLVDVGGGIGATLKMIVSKYPNLKGINFDLPHVIEDAPSHPGIEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCVKFLKNCYESLPEDGKVILAECILPETPDSSLSTKQVVHVDCIMLAHNPGGKERTEKEFEALAKASGFKGIKVVCDAFGVNLIELLK 361
[Close]
BLAST of CF832861 vs. ExPASy Swiss-Prot
Match: COMT1_OCIBA (Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum GN=COMT1 PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.502e-54
Identity = 101/199 (50.75%), Postives = 135/199 (67.84%), Query Frame = -3 
Query:  189 YLGVDSRFNDVFNNGMLSHTSIVMEKVLESYKGFEHVKKLVDVXXXXXXXLNMIISKYPHIKGINYDLSYVIKDAPSYPGIEHVGGDMFESIPEADIIFMKWMLHNFDDEQPLKLLKNCYKALPDGGKLLNINSPISEVPQNSAASREISILDTILLIQIPHGRERPNQEYNELAIKAGFKGVSYECGVCNLYVMEFLK 785
            Y G D RFN VFN GM +H++I M+K+LE+Y GF+ +K +VDV       LNMI+SKYP IKGIN+DL +VI+DAPSYPG+EHVGGDMF S+P+ D IFMKW+ H++ DE  +K LKNCY ALP  GK++     + E P    A++ +  +D I+L   P G+ER  +E+  LA  AGFK  +  C   N ++ME LK
Sbjct:  163 YHGTDPRFNKVFNQGMSNHSTITMKKILETYTGFDGLKTVVDVGGGTGATLNMIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCVKFLKNCYDALPQNGKVILAECVLPEAPDTGLATKNVVHIDVIMLAHNPGGKERTEKEFQGLAKAAGFKQFNKACCAYNTWIMELLK 361
[Close]
BLAST of CF832861 vs. ExPASy Swiss-Prot
Match: COMT1_CAPAN (Caffeic acid 3-O-methyltransferase OS=Capsicum annuum GN=COMT PE=2 SV=2)

HSP 1 Score: 212.616 bits (540), Expect = 1.961e-54
Identity = 103/199 (51.76%), Postives = 134/199 (67.34%), Query Frame = -3 
Query:  189 YLGVDSRFNDVFNNGMLSHTSIVMEKVLESYKGFEHVKKLVDVXXXXXXXLNMIISKYPHIKGINYDLSYVIKDAPSYPGIEHVGGDMFESIPEADIIFMKWMLHNFDDEQPLKLLKNCYKALPDGGKLLNINSPISEVPQNSAASREISILDTILLIQIPHGRERPNQEYNELAIKAGFKGVSYECGVCNLYVMEFLK 785
            Y G D RFN VFN GM  H+++ M+K+LE YKGFE +  +VDV       +NMI+SKYP IKGIN+DLS+VI+DAP+YPG+EHVG DMF S+P+AD IFMKW+ H++ DE  LK LKNCY+ALP  GK+L     + E P  SAA++    +D ++L   P G+ER  +E+  LA  AGF G    C     +VMEF K
Sbjct:  161 YHGTDPRFNKVFNRGMSDHSTMTMKKILEDYKGFEGLNSIVDVGGGTGATVNMIVSKYPSIKGINFDLSHVIEDAPAYPGVEHVGRDMFVSVPKADAIFMKWICHDWSDEHCLKFLKNCYEALPANGKVLVAECILPETPDTSAATKNAVHVDIVMLAHNPGGKERTEKEFEALAKGAGFTGFRRACCAYQTWVMEFHK 359
[Close]
BLAST of CF832861 vs. ExPASy Swiss-Prot
Match: COMT1_POPTM (Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.562e-54
Identity = 101/199 (50.75%), Postives = 135/199 (67.84%), Query Frame = -3 
Query:  189 YLGVDSRFNDVFNNGMLSHTSIVMEKVLESYKGFEHVKKLVDVXXXXXXXLNMIISKYPHIKGINYDLSYVIKDAPSYPGIEHVGGDMFESIPEADIIFMKWMLHNFDDEQPLKLLKNCYKALPDGGKLLNINSPISEVPQNSAASREISILDTILLIQIPHGRERPNQEYNELAIKAGFKGVSYECGVCNLYVMEFLK 785
            Y G D RFN VFN GM  H++I M+K+LE+YKGFE +  LVDV       +N I+SKYP IKGIN+DL +VI+DAPSYPG+EHVGGDMF S+P+AD +FMKW+ H++ D   LK LKNCY ALP+ GK++ +   +   P  S A++ +  +D I+L   P G+ER  +E+  LA  AGF+G    C   N +V+EF K
Sbjct:  165 YHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVPKADAVFMKWICHDWSDAHCLKFLKNCYDALPENGKVILVECILPVAPDTSLATKGVVHVDVIMLAHNPGGKERTEKEFEGLAKGAGFQGFEVMCCAFNTHVIEFRK 363
[Close]
BLAST of CF832861 vs. ExPASy Swiss-Prot
Match: COMT1_POPKI (Caffeic acid 3-O-methyltransferase 1 OS=Populus kitakamiensis GN=HOMT1 PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 3.345e-54
Identity = 101/199 (50.75%), Postives = 134/199 (67.34%), Query Frame = -3 
Query:  189 YLGVDSRFNDVFNNGMLSHTSIVMEKVLESYKGFEHVKKLVDVXXXXXXXLNMIISKYPHIKGINYDLSYVIKDAPSYPGIEHVGGDMFESIPEADIIFMKWMLHNFDDEQPLKLLKNCYKALPDGGKLLNINSPISEVPQNSAASREISILDTILLIQIPHGRERPNQEYNELAIKAGFKGVSYECGVCNLYVMEFLK 785
            Y G D RFN VFN GM  H++I M+K+LE+YKGFE +  LVDV       +N I+SKYP IKGIN+DL +VI+DAPSYPG+EHVGGDMF S+P AD +FMKW+ H++ D   LK LKNCY ALP+ GK++ +   +   P  S A++ +  +D I+L   P G+ER  +E+  LA  AGF+G    C   N +V+EF K
Sbjct:  165 YHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVPNADAVFMKWICHDWSDAHCLKFLKNCYDALPENGKVILVECILPVAPDTSLATKGVVHVDVIMLAHNPGGKERTEKEFEGLANGAGFQGFEVMCCAFNTHVIEFRK 363
[Close]
BLAST of CF832861 vs. ExPASy Swiss-Prot
Match: COMT1_CLABR (Caffeic acid 3-O-methyltransferase OS=Clarkia breweri GN=COMT PE=1 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 3.345e-54
Identity = 103/199 (51.76%), Postives = 133/199 (66.83%), Query Frame = -3 
Query:  189 YLGVDSRFNDVFNNGMLSHTSIVMEKVLESYKGFEHVKKLVDVXXXXXXXLNMIISKYPHIKGINYDLSYVIKDAPSYPGIEHVGGDMFESIPEADIIFMKWMLHNFDDEQPLKLLKNCYKALPDGGKLLNINSPISEVPQNSAASREISILDTILLIQIPHGRERPNQEYNELAIKAGFKGVSYECGVCNLYVMEFLK 785
            Y G D RFN VFN GM  H++I M+K+ E Y GFE +  +VDV       L+MI++KYP IKGIN+DL +VI+DAP YPG+EHVGGDMF S+P+ D IFMKW+ H++ DE  LK LKNCY ALP+ GK++     +   P  S A++ +  +D I+L   P G+ER  +E+  LAI AGFKG    C   N YVMEFLK
Sbjct:  170 YHGTDPRFNKVFNRGMSDHSTITMKKIFEMYTGFEALNTIVDVGGGTGAVLSMIVAKYPSIKGINFDLPHVIEDAPIYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCYAALPEHGKVIVAECILPLSPDPSLATKGVIHIDAIMLAHNPGGKERTEKEFEALAIGAGFKGFKVACCAFNTYVMEFLK 368
[Close]
BLAST of CF832861 vs. ExPASy Swiss-Prot
Match: COMT3_POPKI (Caffeic acid 3-O-methyltransferase 3 OS=Populus kitakamiensis GN=HOMT3 PE=3 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 2.832e-53
Identity = 99/199 (49.75%), Postives = 136/199 (68.34%), Query Frame = -3 
Query:  189 YLGVDSRFNDVFNNGMLSHTSIVMEKVLESYKGFEHVKKLVDVXXXXXXXLNMIISKYPHIKGINYDLSYVIKDAPSYPGIEHVGGDMFESIPEADIIFMKWMLHNFDDEQPLKLLKNCYKALPDGGKLLNINSPISEVPQNSAASREISILDTILLIQIPHGRERPNQEYNELAIKAGFKGVSYECGVCNLYVMEFLK 785
            Y G D RFN VFN GM  H+ + M+K+LESYKGFE +  LVDV       ++ I+SKYP IKGIN+DL +VI DAP++PG+E+VGGDMF S+P+AD +FMKW+ H++ DE  L+LLKNCY ALP+ GK++ +   +   P  S A++ +  +D I+L   P G+ER ++E+  LA  AGFKG    C   N +V+EF K
Sbjct:  164 YHGTDPRFNKVFNKGMSDHSKMAMKKILESYKGFEGLASLVDVGGGTGAVVSTIVSKYPSIKGINFDLPHVIADAPAFPGVENVGGDMFVSVPKADAVFMKWICHDWSDEHCLRLLKNCYDALPENGKVILVECILPVAPDTSLATKGVMHVDAIMLAHNPGGKERTDKEFEGLARGAGFKGFEVMCCAFNTHVIEFRK 362
The following BLAST results are available for this feature:
BLAST of CF832861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
COMT1_MEDSA3.819e-5853.27Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]
COMT1_PRUDU5.514e-5753.27Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]
COMT1_ROSCH2.095e-5651.26Caffeic acid 3-O-methyltransferase OS=Rosa chinens... [more]
OMT1_ARATH1.150e-5449.75Quercetin 3-O-methyltransferase 1 OS=Arabidopsis t... [more]
COMT1_OCIBA1.502e-5450.75Caffeic acid 3-O-methyltransferase 1 OS=Ocimum bas... [more]
COMT1_CAPAN1.961e-5451.76Caffeic acid 3-O-methyltransferase OS=Capsicum ann... [more]
COMT1_POPTM2.562e-5450.75Caffeic acid 3-O-methyltransferase 1 OS=Populus tr... [more]
COMT1_POPKI3.345e-5450.75Caffeic acid 3-O-methyltransferase 1 OS=Populus ki... [more]
COMT1_CLABR3.345e-5451.76Caffeic acid 3-O-methyltransferase OS=Clarkia brew... [more]
COMT3_POPKI2.832e-5349.75Caffeic acid 3-O-methyltransferase 3 OS=Populus ki... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_02J05_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02J05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832861 ID=CF832861; Name=CF832861; organism=Citrus sinensis; type=EST; length=787bp
TTTTTTTTTTTTTTTTTGCCCTATAAGGGAATCAATCTCCCTATAAGAGA
TTTATTATTTGATAAAACGAAAGAGATTACATAAGAGAAGCCCTCCATCC
AAAGGAAAGAGATAACAAGACAAACCGGAAATTGAAAACAACCCAAGAAA
GCTAAGGAGATCTTTCCGAATAGAGAAAAAGCAATCTATTTCAAGAACTC
CATAACATATAAATTACATACACCACATTCGTAGCTGACACCTTTAAATC
CAGCTTTAATTGCCAATTCATTGTATTCTTGGTTGGGCCGCTCTCTTCCA
TGAGGAATTTGGATTAACAAAATTGTATCCAAAATAGAGATTTCCCTTGA
AGCCGCACTATTTTGAGGCACTTCTGAAATGGGTGAATTAATATTGAGCA
GCTTCCCACCATCTGGAAGAGCTTTGTAACAATTCTTCAACAATTTCAAG
GGTTGCTCATCATCAAAATTGTGAAGCATCCACTTCATGAAAATAATATC
CGCCTCAGGAATACTTTCGAACATATCTCCACCCACGTGTTCGATGCCGG
GATAAGATGGGGCATCTTTAATAACATAAGACAGATCATAATTAATACCC
TTAATATGAGGGTATTTGGAAATTATCATGTTGAGGGTAGTTCCTAAGCC
GCCGCCAACATCAACAAGCTTCTTAACATGCTCAAAACCTTTGTATGATT
CTAGGACCTTCTCCATGACAATAGAAGTGTGGCTTAACATTCCATTATTA
AAAACATCATTGAACCTGGAGTCAACGCCTAAGTAAT
back to top