CF832936

Overview
NameCF832936
Unique NameCF832936
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length729
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7528 contig Csv1_Contig7528:535..1263. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832936 vs. ExPASy Swiss-Prot
Match: PIP21_ARATH (Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1 PE=1 SV=1)

HSP 1 Score: 270.011 bits (689), Expect = 9.185e-72
Identity = 131/152 (86.18%), Postives = 136/152 (89.47%), Query Frame = -1
Query:  274 YMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGPFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYTKDKAWDDQWLFWVGPFIGAAIAAFSPQFILRAGAVKALG 729
            Y++AQCLGAI GVG VKAFQ SYYTRYGGGAN LADGYSTG GLAAEIIG FVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS GAAVIY K K WDD W+FWVGPFIGAAIAAF  QF+LRA   K+LG
Sbjct:  128 YIIAQCLGAICGVGFVKAFQSSYYTRYGGGANSLADGYSTGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKSKPWDDHWIFWVGPFIGAAIAAFYHQFVLRASGSKSLG 279          
BLAST of CF832936 vs. ExPASy Swiss-Prot
Match: PIP25_ARATH (Probable aquaporin PIP2-5 OS=Arabidopsis thaliana GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 1.567e-71
Identity = 130/152 (85.53%), Postives = 139/152 (91.45%), Query Frame = -1
Query:  274 YMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGPFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYTKDKAWDDQWLFWVGPFIGAAIAAFSPQFILRAGAVKALG 729
            YMVAQCLGAI GV LVKAFQ +Y+TRYGGGAN L+DGYS G G+AAEIIG FVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVF+VHLATIPITGTGINPARSLGAA+IY KDKAWD  W+FWVGPF GAAIAAF  QF+LRAGA+KALG
Sbjct:  127 YMVAQCLGAICGVALVKAFQSAYFTRYGGGANGLSDGYSIGTGVAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFIVHLATIPITGTGINPARSLGAAIIYNKDKAWDHHWIFWVGPFAGAAIAAFYHQFVLRAGAIKALG 278          
BLAST of CF832936 vs. ExPASy Swiss-Prot
Match: PIP24_ARATH (Probable aquaporin PIP2-4 OS=Arabidopsis thaliana GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 4.558e-71
Identity = 130/152 (85.53%), Postives = 136/152 (89.47%), Query Frame = -1
Query:  274 YMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGPFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYTKDKAWDDQWLFWVGPFIGAAIAAFSPQFILRAGAVKALG 729
            Y+VAQCLGAI G G VKAFQ SYYTRYGGGANELADGY+ G GL AEIIG FVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS GAAVIY  +KAWDDQW+FWVGP IGAA AAF  QFILRA A+KALG
Sbjct:  128 YIVAQCLGAICGCGFVKAFQSSYYTRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDQWIFWVGPMIGAAAAAFYHQFILRAAAIKALG 279          
BLAST of CF832936 vs. ExPASy Swiss-Prot
Match: PIP22_ARATH (Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2 PE=1 SV=2)

HSP 1 Score: 267.314 bits (682), Expect = 5.953e-71
Identity = 130/152 (85.53%), Postives = 135/152 (88.82%), Query Frame = -1
Query:  274 YMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGPFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYTKDKAWDDQWLFWVGPFIGAAIAAFSPQFILRAGAVKALG 729
            YMVAQCLGAI GVG VKAFQ SYY RYGGGAN LADGY+TG GLAAEIIG FVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS GAAVIY K K WDD W+FWVGPFIGAAIAAF  QF+LRA   K+LG
Sbjct:  126 YMVAQCLGAICGVGFVKAFQSSYYDRYGGGANSLADGYNTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKSKPWDDHWIFWVGPFIGAAIAAFYHQFVLRASGSKSLG 277          
BLAST of CF832936 vs. ExPASy Swiss-Prot
Match: PIP22_MAIZE (Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 1.016e-70
Identity = 126/152 (82.89%), Postives = 137/152 (90.13%), Query Frame = -1
Query:  274 YMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGPFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYTKDKAWDDQWLFWVGPFIGAAIAAFSPQFILRAGAVKALG 729
            YMVAQCLGA+ GVGLVKAFQ +Y+ RYGGGAN LA GYS G GL AEI+G FVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIP+TGTGINPARSLGAAV+Y KDK WDD W+FWVGP +GAAIAAF  Q+ILRAGA+KALG
Sbjct:  135 YMVAQCLGAVCGVGLVKAFQSAYFDRYGGGANSLASGYSRGAGLGAEIVGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVVYNKDKPWDDHWIFWVGPLLGAAIAAFYHQYILRAGAIKALG 286          
BLAST of CF832936 vs. ExPASy Swiss-Prot
Match: PIP21_MAIZE (Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2)

HSP 1 Score: 266.544 bits (680), Expect = 1.016e-70
Identity = 128/152 (84.21%), Postives = 137/152 (90.13%), Query Frame = -1
Query:  274 YMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGPFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYTKDKAWDDQWLFWVGPFIGAAIAAFSPQFILRAGAVKALG 729
            Y+VAQCLGAI GVGLVKAFQ +Y+ RYGGGAN LA GYS G GL AEIIG FVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIP+TGTGINPARSLGAAVIY KDK WDD W+FWVGP +GAAIAAF  Q+ILRAGA+KALG
Sbjct:  133 YIVAQCLGAICGVGLVKAFQSAYFDRYGGGANSLASGYSRGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYNKDKPWDDHWIFWVGPLVGAAIAAFYHQYILRAGAIKALG 284          
BLAST of CF832936 vs. ExPASy Swiss-Prot
Match: PIP24_MAIZE (Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 3.859e-70
Identity = 128/149 (85.91%), Postives = 135/149 (90.60%), Query Frame = -1
Query:  283 YMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGPFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYTKDKAWDDQWLFWVGPFIGAAIAAFSPQFILRAGAVK 729
            Y++AQCLGAI GVGLVK FQ +YY RYGGGANEL+DGYS G GLAAEIIG FVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIY KDKAWDDQW+FWVGP IGAAIAA   Q++LRA A K
Sbjct:  132 YIIAQCLGAICGVGLVKGFQSAYYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQYVLRASATK 280          
BLAST of CF832936 vs. ExPASy Swiss-Prot
Match: PIP23_MAIZE (Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 3.859e-70
Identity = 128/149 (85.91%), Postives = 135/149 (90.60%), Query Frame = -1
Query:  283 YMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGPFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYTKDKAWDDQWLFWVGPFIGAAIAAFSPQFILRAGAVK 729
            Y++AQCLGAI GVGLVK FQ +YY RYGGGANEL+DGYS G GLAAEIIG FVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIY KDKAWDDQW+FWVGP IGAAIAA   Q++LRA A K
Sbjct:  133 YIIAQCLGAICGVGLVKGFQSAYYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQYVLRASATK 281          
BLAST of CF832936 vs. ExPASy Swiss-Prot
Match: PIP26_ARATH (Probable aquaporin PIP2-6 OS=Arabidopsis thaliana GN=PIP2-6 PE=1 SV=1)

HSP 1 Score: 263.848 bits (673), Expect = 6.582e-70
Identity = 125/152 (82.24%), Postives = 136/152 (89.47%), Query Frame = -1
Query:  274 YMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGPFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYTKDKAWDDQWLFWVGPFIGAAIAAFSPQFILRAGAVKALG 729
            YMVAQCLGA  GVGLVK FQ +YY RYGGGAN L+DGY+ GVG+ AEIIG FVLVYTVFSATDPKR+ARDSH+PVLAPLPIGF+VFMVHLATIPITGTGINPARS GAAVIY   KAWDDQW+FWVGPF+GAAIAAF  QF+LRAGA+KA G
Sbjct:  127 YMVAQCLGATCGVGLVKVFQSTYYNRYGGGANMLSDGYNVGVGVGAEIIGTFVLVYTVFSATDPKRNARDSHIPVLAPLPIGFSVFMVHLATIPITGTGINPARSFGAAVIYNNQKAWDDQWIFWVGPFVGAAIAAFYHQFVLRAGAMKAYG 278          
BLAST of CF832936 vs. ExPASy Swiss-Prot
Match: PIP21_ORYSJ (Probable aquaporin PIP2-1 OS=Oryza sativa subsp. japonica GN=PIP2-1 PE=2 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 3.267e-69
Identity = 126/152 (82.89%), Postives = 138/152 (90.79%), Query Frame = -1
Query:  274 YMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGPFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYTKDKAWDDQWLFWVGPFIGAAIAAFSPQFILRAGAVKALG 729
            Y+VAQCLGAI GVGLVKAFQ +Y+ RYGGGAN LA GYS G GLAAEIIG FVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS+GAAVI+  +KAW + W+FWVGPF+GAAIAAF  Q+ILRAGA+KALG
Sbjct:  133 YIVAQCLGAICGVGLVKAFQSAYFNRYGGGANTLAAGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSIGAAVIFNNEKAWHNHWIFWVGPFVGAAIAAFYHQYILRAGAIKALG 284          
The following BLAST results are available for this feature:
BLAST of CF832936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
PIP21_ARATH9.185e-7286.18Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1... [more]
PIP25_ARATH1.567e-7185.53Probable aquaporin PIP2-5 OS=Arabidopsis thaliana ... [more]
PIP24_ARATH4.558e-7185.53Probable aquaporin PIP2-4 OS=Arabidopsis thaliana ... [more]
PIP22_ARATH5.953e-7185.53Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2... [more]
PIP22_MAIZE1.016e-7082.89Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1[more]
PIP21_MAIZE1.016e-7084.21Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2[more]
PIP24_MAIZE3.859e-7085.91Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1[more]
PIP23_MAIZE3.859e-7085.91Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1[more]
PIP26_ARATH6.582e-7082.24Probable aquaporin PIP2-6 OS=Arabidopsis thaliana ... [more]
PIP21_ORYSJ3.267e-6982.89Probable aquaporin PIP2-1 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02L05_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02L05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832936 ID=CF832936; Name=CF832936; organism=Citrus sinensis; type=EST; length=729bp
TTTTTTTTTTTTTTTTTGAATTCTAAGGAAAGTGCTTGAAAACAACAGAG
GGGATTACAAAAAAGCGAGCCCCCTCATTGTCTAAGAGACTTTTTGCCTA
CAACTCCTTGAAAGCACAAATCACACCCCCCCTCATTATTCACTTTTTGA
AACTTAACACACCTCTACTCCTTCCCAGTTTTTTCTTTCCAATTTTAAAT
CATTAACCCCATGAAGATGGGGATAATCCACTTGTCGAAACTAAAATCAG
ACACGGGATTGGCTCCTGAATGAACCAAGAGCCTTGACAGCTCCAGCTCT
CAAGATGAATTGGGGGGAGAAAGCCGCAATTGCTGCACCGATGAAGGGTC
CAACCCAAAAAAGCCATTGATCATCCCAAGCCTTGTCCTTGGTGTAAATA
ACAGCGGCCCCGAGACTCCTTGCTGGGTTAATGCCAGTGCCAGTGATTGG
GATTGTGGCCAAGTGTACCATGAACACAGCAAATCCAATGGGGAGCGGTG
CCAAAACGGGGACATGGGAGTCTCTGGCGCTTCTCTTGGGATCAGTGGCC
GAGAAGACAGTGTAAACCAACACAAAGGGGCCGATGATCTCGGCGGCCAA
TCCAACGCCTGTGCTGTACCCATCGGCCAGCTCGTTGGCCCCACCTCCGT
ACCTTGTGTAGTAAGATTTTTGGAAAGCCTTGACCAACCCCACACCGGAG
ATTGCACCAAGGCACTGCGCCACCATGTA
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