CF833005
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF833005 vs. ExPASy Swiss-Prot
Match: TM9S2_RAT (Transmembrane 9 superfamily member 2 OS=Rattus norvegicus GN=Tm9sf2 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 3.819e-14 Identity = 35/54 (64.81%), Postives = 42/54 (77.78%), Query Frame = 1 Query: 1 YFFTILEITKLVSGILYFGYMVIVSYAFFVLTGTIGFYACFWFVRKIYSSVKID 162 YFF+ L+IT S ILYFGY +I+ FF+ TGTIGF+ACFWFV KIYS VK+D Sbjct: 610 YFFSKLQITGTASTILYFGYTMIMVLIFFLFTGTIGFFACFWFVTKIYSVVKVD 663
BLAST of CF833005 vs. ExPASy Swiss-Prot
Match: TM9S2_PONAB (Transmembrane 9 superfamily member 2 OS=Pongo abelii GN=TM9SF2 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 3.819e-14 Identity = 35/54 (64.81%), Postives = 42/54 (77.78%), Query Frame = 1 Query: 1 YFFTILEITKLVSGILYFGYMVIVSYAFFVLTGTIGFYACFWFVRKIYSSVKID 162 YFF+ L+IT S ILYFGY +I+ FF+ TGTIGF+ACFWFV KIYS VK+D Sbjct: 610 YFFSKLQITGTASTILYFGYTMIMVLIFFLFTGTIGFFACFWFVTKIYSVVKVD 663
BLAST of CF833005 vs. ExPASy Swiss-Prot
Match: TM9S2_MOUSE (Transmembrane 9 superfamily member 2 OS=Mus musculus GN=Tm9sf2 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 3.819e-14 Identity = 35/54 (64.81%), Postives = 42/54 (77.78%), Query Frame = 1 Query: 1 YFFTILEITKLVSGILYFGYMVIVSYAFFVLTGTIGFYACFWFVRKIYSSVKID 162 YFF+ L+IT S ILYFGY +I+ FF+ TGTIGF+ACFWFV KIYS VK+D Sbjct: 609 YFFSKLQITGTASTILYFGYTMIMVLIFFLFTGTIGFFACFWFVTKIYSVVKVD 662
BLAST of CF833005 vs. ExPASy Swiss-Prot
Match: TM9S2_HUMAN (Transmembrane 9 superfamily member 2 OS=Homo sapiens GN=TM9SF2 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 3.819e-14 Identity = 35/54 (64.81%), Postives = 42/54 (77.78%), Query Frame = 1 Query: 1 YFFTILEITKLVSGILYFGYMVIVSYAFFVLTGTIGFYACFWFVRKIYSSVKID 162 YFF+ L+IT S ILYFGY +I+ FF+ TGTIGF+ACFWFV KIYS VK+D Sbjct: 610 YFFSKLQITGTASTILYFGYTMIMVLIFFLFTGTIGFFACFWFVTKIYSVVKVD 663
BLAST of CF833005 vs. ExPASy Swiss-Prot
Match: TM9S4_RAT (Transmembrane 9 superfamily member 4 OS=Rattus norvegicus GN=Tm9sf4 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.952e-11 Identity = 29/54 (53.70%), Postives = 41/54 (75.93%), Query Frame = 1 Query: 1 YFFTILEITKLVSGILYFGYMVIVSYAFFVLTGTIGFYACFWFVRKIYSSVKID 162 YF L+I + + +LYFGY ++ +F++LTGTIGFYA + FVRKIY++VKID Sbjct: 590 YFVNKLDIVEFIPSLLYFGYTTLMVLSFWLLTGTIGFYAAYMFVRKIYAAVKID 643
BLAST of CF833005 vs. ExPASy Swiss-Prot
Match: TM9S4_PONAB (Transmembrane 9 superfamily member 4 OS=Pongo abelii GN=TM9SF4 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.952e-11 Identity = 29/54 (53.70%), Postives = 41/54 (75.93%), Query Frame = 1 Query: 1 YFFTILEITKLVSGILYFGYMVIVSYAFFVLTGTIGFYACFWFVRKIYSSVKID 162 YF L+I + + +LYFGY ++ +F++LTGTIGFYA + FVRKIY++VKID Sbjct: 589 YFVNKLDIVEFIPSLLYFGYTALMVLSFWLLTGTIGFYAAYMFVRKIYAAVKID 642
BLAST of CF833005 vs. ExPASy Swiss-Prot
Match: TM9S4_MOUSE (Transmembrane 9 superfamily member 4 OS=Mus musculus GN=Tm9sf4 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.952e-11 Identity = 29/54 (53.70%), Postives = 41/54 (75.93%), Query Frame = 1 Query: 1 YFFTILEITKLVSGILYFGYMVIVSYAFFVLTGTIGFYACFWFVRKIYSSVKID 162 YF L+I + + +LYFGY ++ +F++LTGTIGFYA + FVRKIY++VKID Sbjct: 590 YFVNKLDIVEFIPSLLYFGYTTLMVLSFWLLTGTIGFYAAYMFVRKIYAAVKID 643
BLAST of CF833005 vs. ExPASy Swiss-Prot
Match: TM9S4_HUMAN (Transmembrane 9 superfamily member 4 OS=Homo sapiens GN=TM9SF4 PE=1 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 3.952e-11 Identity = 29/54 (53.70%), Postives = 41/54 (75.93%), Query Frame = 1 Query: 1 YFFTILEITKLVSGILYFGYMVIVSYAFFVLTGTIGFYACFWFVRKIYSSVKID 162 YF L+I + + +LYFGY ++ +F++LTGTIGFYA + FVRKIY++VKID Sbjct: 589 YFVNKLDIVEFIPSLLYFGYTALMVLSFWLLTGTIGFYAAYMFVRKIYAAVKID 642
BLAST of CF833005 vs. ExPASy Swiss-Prot
Match: TM9S4_BOVIN (Transmembrane 9 superfamily member 4 OS=Bos taurus GN=TM9SF4 PE=2 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 3.952e-11 Identity = 29/54 (53.70%), Postives = 41/54 (75.93%), Query Frame = 1 Query: 1 YFFTILEITKLVSGILYFGYMVIVSYAFFVLTGTIGFYACFWFVRKIYSSVKID 162 YF L+I + + +LYFGY ++ +F++LTGTIGFYA + FVRKIY++VKID Sbjct: 589 YFVNKLDIVEFIPSLLYFGYTALMVLSFWLLTGTIGFYAAYMFVRKIYAAVKID 642
BLAST of CF833005 vs. ExPASy Swiss-Prot
Match: PHG1A_DICDI (Putative phagocytic receptor 1a OS=Dictyostelium discoideum GN=phg1a PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 8.805e-11 Identity = 31/53 (58.49%), Postives = 39/53 (73.58%), Query Frame = 1 Query: 4 FFTILEITKLVSGILYFGYMVIVSYAFFVLTGTIGFYACFWFVRKIYSSVKID 162 FF L ITK +S +L F Y I+S AF LTGTIGFY+C++ VRKIYSS+ I+ Sbjct: 589 FFRYLGITKFISSLLDFSYSFIMSLAFAALTGTIGFYSCYFLVRKIYSSIHIN 641 The following BLAST results are available for this feature:
BLAST of CF833005 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF833005 ID=CF833005; Name=CF833005; organism=Citrus sinensis; type=EST; length=491bpback to top |