CF833008
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF833008 vs. ExPASy Swiss-Prot
Match: TCPG_OXYGR (T-complex protein 1 subunit gamma OS=Oxytricha granulifera PE=3 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 4.333e-50 Identity = 96/161 (59.63%), Postives = 122/161 (75.78%), Query Frame = -1 Query: 241 RGASKDLSNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMNALQGKHVHG-ENAWIGIDGNSGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSGQ 720 RGASKD+ NE+ERNL DA+ VARN++ NPKLVPGGGA E+ ++ L + S IEG+++WP++A A A E IPRTLAQNCG +V+R M L+ KH + E + GIDGN+G I DM+E +WD +VK QT KT+IEA CMLLRIDDIVSGIKK + G+GQ Sbjct: 379 RGASKDVLNEIERNLHDALGVARNVMVNPKLVPGGGAIEMELACRLMEFSQKIEGMQQWPFKALAGALEVIPRTLAQNCGADVVRVMTELRAKHANDKEGLYWGIDGNTGKIRDMRESNVWDPISVKQQTLKTSIEATCMLLRIDDIVSGIKKDKRGGAGQ 539
BLAST of CF833008 vs. ExPASy Swiss-Prot
Match: TCPG_TETPY (T-complex protein 1 subunit gamma OS=Tetrahymena pyriformis PE=3 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.067e-48 Identity = 94/159 (59.12%), Postives = 122/159 (76.73%), Query Frame = -1 Query: 244 RGASKDLSNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMNALQGKHVHGENAWIGIDGNSGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSG 720 RGASKD+ NE+ERNL D ++VA+NI NPKLVPGGGA E+ VS+ L++ SSSIEG+ + P+ A A A EAIP+TLAQNCGV+V+R + L+ KH N +IGI+GNSG I+DM E +W+ VK Q +KTAIE+ACMLLRIDD+VSG+KK++ G Sbjct: 380 RGASKDVLNEMERNLHDCLAVAKNIFVNPKLVPGGGAIEMEVSSHLEKISSSIEGLHQLPFRAVAYALEAIPKTLAQNCGVDVVRNITELRAKHNQEGNKFIGIEGNSGKITDMGEANVWEPIAVKLQVYKTAIESACMLLRIDDVVSGLKKQKVAKGG 538
BLAST of CF833008 vs. ExPASy Swiss-Prot
Match: TCPG_SCHPO (T-complex protein 1 subunit gamma OS=Schizosaccharomyces pombe GN=cct3 PE=1 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.304e-46 Identity = 89/152 (58.55%), Postives = 115/152 (75.66%), Query Frame = -1 Query: 265 RGASKDLSNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMNALQGKHVHGENAWIGIDGNSGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKK 720 RG SKD+ NEVERNLQDAM+VARN+ +PKL PGGGATE+ VS L +K+ SIEG+ +WPY A A A E IPRTL QNCG N I+ + L+ KH G++++ GIDG +G + DM E +W+ VK Q+ KTAIE+AC+LLR+DDIVSG++K Sbjct: 375 RGPSKDIINEVERNLQDAMAVARNVFFHPKLSPGGGATEMAVSVRLAEKARSIEGVAQWPYRAVADAIEIIPRTLVQNCGANPIKALTELRAKHAEGQHSF-GIDGETGRVVDMHEYGVWEPEAVKLQSIKTAIESACLLLRVDDIVSGVRK 525
BLAST of CF833008 vs. ExPASy Swiss-Prot
Match: TCPG_XENLA (T-complex protein 1 subunit gamma OS=Xenopus laevis GN=cct3 PE=2 SV=2) HSP 1 Score: 181.03 bits (458), Expect = 5.481e-45 Identity = 91/173 (52.60%), Postives = 120/173 (69.36%), Query Frame = -1 Query: 205 RGASKDLSNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMNALQGKHV-HGENAWIGIDGNSGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSGQTPLKPQIETEAD 720 RGASK++ EVERNLQDAM V RN++ +P LVPGGGA+E++V+ L +KS ++ G+E+WPY A A A E IPRTL QNCG + IR + +L+ KH G W G+DG +G ++DMKE IW+ VK QT+KTA+E A +LLRIDDIVSG KKK Q P+ +A+ Sbjct: 376 RGASKEILAEVERNLQDAMQVCRNVVIDPYLVPGGGASEMSVAHILTEKSKTMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRILTSLRAKHTQEGCQTW-GVDGEAGVLADMKELGIWEPLAVKLQTYKTAVETAILLLRIDDIVSGHKKKGEDHGRQPAAAPEAPQQAE 547
BLAST of CF833008 vs. ExPASy Swiss-Prot
Match: TCPG_RAT (T-complex protein 1 subunit gamma OS=Rattus norvegicus GN=Cct3 PE=1 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 3.552e-44 Identity = 87/161 (54.04%), Postives = 115/161 (71.43%), Query Frame = -1 Query: 238 RGASKDLSNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMNALQGKHVHGENAWIGIDGNSGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSGQT 720 RGASK++ +EVERNLQDAM V RN++ +P+LVPGGGA+E+ V+ L +KS ++ G+E+WPY A A A E IPRTL QNCG + IR + +L+ KH G++G +G + DMKE IW+ VK QT+KTA+E A +LLRIDDIVSG KKK + QT Sbjct: 377 RGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHKKKGDDQNRQT 537
BLAST of CF833008 vs. ExPASy Swiss-Prot
Match: TCPG_MOUSE (T-complex protein 1 subunit gamma OS=Mus musculus GN=Cct3 PE=1 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 3.552e-44 Identity = 87/161 (54.04%), Postives = 115/161 (71.43%), Query Frame = -1 Query: 238 RGASKDLSNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMNALQGKHVHGENAWIGIDGNSGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSGQT 720 RGASK++ +EVERNLQDAM V RN++ +P+LVPGGGA+E+ V+ L +KS ++ G+E+WPY A A A E IPRTL QNCG + IR + +L+ KH G++G +G + DMKE IW+ VK QT+KTA+E A +LLRIDDIVSG KKK + QT Sbjct: 377 RGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQESCETWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHKKKGDDQNRQT 537
BLAST of CF833008 vs. ExPASy Swiss-Prot
Match: TCPG_PONAB (T-complex protein 1 subunit gamma OS=Pongo abelii GN=CCT3 PE=2 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 4.640e-44 Identity = 89/168 (52.98%), Postives = 117/168 (69.64%), Query Frame = -1 Query: 241 RGASKDLSNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMNALQGKHVHGENAWIGIDGNSGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKK--------QAPGSGQ 720 RGASK++ +EVERNLQDAM V RN++ +P+LVPGGGA+E+ V+ L +KS ++ G+E+WPY A A A E IPRTL QNCG + IR + +L+ KH G++G +G + DMKE IW+ VK QT+KTA+E A +LLRIDDIVSG KKK AP +GQ Sbjct: 377 RGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHKKKGDDQSRQGGAPDAGQ 544
BLAST of CF833008 vs. ExPASy Swiss-Prot
Match: TCPG_HUMAN (T-complex protein 1 subunit gamma OS=Homo sapiens GN=CCT3 PE=1 SV=4) HSP 1 Score: 177.948 bits (450), Expect = 4.640e-44 Identity = 89/168 (52.98%), Postives = 117/168 (69.64%), Query Frame = -1 Query: 241 RGASKDLSNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMNALQGKHVHGENAWIGIDGNSGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKK--------QAPGSGQ 720 RGASK++ +EVERNLQDAM V RN++ +P+LVPGGGA+E+ V+ L +KS ++ G+E+WPY A A A E IPRTL QNCG + IR + +L+ KH G++G +G + DMKE IW+ VK QT+KTA+E A +LLRIDDIVSG KKK AP +GQ Sbjct: 377 RGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHKKKGDDQSRQGGAPDAGQ 544
BLAST of CF833008 vs. ExPASy Swiss-Prot
Match: TCPG_BOVIN (T-complex protein 1 subunit gamma OS=Bos taurus GN=CCT3 PE=2 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 4.640e-44 Identity = 89/168 (52.98%), Postives = 117/168 (69.64%), Query Frame = -1 Query: 241 RGASKDLSNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMNALQGKHVHGENAWIGIDGNSGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKK--------QAPGSGQ 720 RGASK++ +EVERNLQDAM V RN++ +P+LVPGGGA+E+ V+ L +KS ++ G+E+WPY A A A E IPRTL QNCG + IR + +L+ KH G++G +G + DMKE IW+ VK QT+KTA+E A +LLRIDDIVSG KKK AP +GQ Sbjct: 377 RGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHKKKGDDQSRQGGAPDAGQ 544
BLAST of CF833008 vs. ExPASy Swiss-Prot
Match: TCPG_MACFA (T-complex protein 1 subunit gamma OS=Macaca fascicularis GN=CCT3 PE=2 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.350e-43 Identity = 88/168 (52.38%), Postives = 117/168 (69.64%), Query Frame = -1 Query: 241 RGASKDLSNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMNALQGKHVHGENAWIGIDGNSGAISDMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKK--------QAPGSGQ 720 RGASK++ +EVERNLQDAM V RN++ +P+LVPGGGA+E+ V+ L +KS ++ G+E+WPY A A A E IPRTL QNCG + IR + +L+ KH G++G +G + D+KE IW+ VK QT+KTA+E A +LLRIDDIVSG KKK AP +GQ Sbjct: 377 RGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLVDVKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHKKKGDDQSRQGGAPDAGQ 544 The following BLAST results are available for this feature:
BLAST of CF833008 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 140
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Sequences
The
following sequences are available for this feature:
EST sequence >CF833008 ID=CF833008; Name=CF833008; organism=Citrus sinensis; type=EST; length=720bpback to top |