CF833016

Overview
NameCF833016
Unique NameCF833016
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7520 contig Csv1_Contig7520:148..978. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF833016 vs. ExPASy Swiss-Prot
Match: HSP71_ARATH (Heat shock cognate 70 kDa protein 1 OS=Arabidopsis thaliana GN=HSC70-1 PE=1 SV=3)

HSP 1 Score: 368.622 bits (945), Expect = 2.373e-101
Identity = 188/222 (84.68%), Postives = 194/222 (87.39%), Query Frame = -2
Query:  178 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ----XXXXXXXXXXXXXXXXXGSGAGPKIEEVD 831
            KEQVFSTYSDNQPGVLIQVYEGER RT+DNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNT++DEKIG KL  ADKKKIED+I+QAIQWL+ NQLAEADEFEDKMKELESICNPIIAKMYQ                       GAGPKIEEVD
Sbjct:  430 KEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIQDEKIGEKLPAADKKKIEDSIEQAIQWLEGNQLAEADEFEDKMKELESICNPIIAKMYQGAGGEAGGPGASGMDDDAPPASGGAGPKIEEVD 651          
BLAST of CF833016 vs. ExPASy Swiss-Prot
Match: HSP72_SOLLC (Heat shock cognate 70 kDa protein 2 OS=Solanum lycopersicum GN=HSC-2 PE=2 SV=1)

HSP 1 Score: 365.925 bits (938), Expect = 1.538e-100
Identity = 187/218 (85.78%), Postives = 194/218 (88.99%), Query Frame = -2
Query:  178 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQXXXXXXXXXXXXXXXXXGSGAGPKIEEVD 831
            KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANG LNVSAEDKTTGQKNKITITNDKGRLSK+EIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNT+KDEKI SKL+  D+ KIEDAI+QAIQWLD NQLAEA+EFEDKMKELES+CNPIIAKMYQ                 G GAGPKIEEVD
Sbjct:  430 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGTLNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIKDEKIASKLSADDRTKIEDAIEQAIQWLDGNQLAEAEEFEDKMKELESLCNPIIAKMYQ---GAGGDMDDEGPAPSGGGAGPKIEEVD 644          
BLAST of CF833016 vs. ExPASy Swiss-Prot
Match: HSP73_ARATH (Heat shock cognate 70 kDa protein 3 OS=Arabidopsis thaliana GN=HSC70-3 PE=1 SV=1)

HSP 1 Score: 364.77 bits (935), Expect = 3.426e-100
Identity = 185/220 (84.09%), Postives = 194/220 (88.18%), Query Frame = -2
Query:  178 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQXXXXXXXXXXXXXXXXXGS--GAGPKIEEVD 831
            KEQVFSTYSDNQPGVLIQVYEGER RT+DNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKV+AKNALENYAYNMRNT++DEKIG KLA  DKKKIED+I+ AI+WL++NQLAE DEFEDKMKELESICNPIIAKMYQ                  S  GAGPKIEEVD
Sbjct:  430 KEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVDAKNALENYAYNMRNTIRDEKIGEKLAGDDKKKIEDSIEAAIEWLEANQLAECDEFEDKMKELESICNPIIAKMYQGGEAGGPAAGGMDEDVPPSAGGAGPKIEEVD 649          
BLAST of CF833016 vs. ExPASy Swiss-Prot
Match: HSP7E_SPIOL (Chloroplast envelope membrane 70 kDa heat shock-related protein OS=Spinacia oleracea GN=SCE70 PE=1 SV=3)

HSP 1 Score: 363.999 bits (933), Expect = 5.845e-100
Identity = 184/216 (85.19%), Postives = 191/216 (88.43%), Query Frame = -2
Query:  184 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQXXXXXXXXXXXXXXXXXGSGAGPKIEE 831
            KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPP PRGVPQI VCFDIDANGILNVSAEDKTTGQKNKI ITNDKGRLSK+EIEKMVQEAEKYKSEDEEHKKKVE+KNALENYAYNMRN VKDEKIG+KL+ ADKKKIE+AID +IQWLD NQLAEADEF+DKMKELESICNPIIAKMYQ                 G GAGPKIEE
Sbjct:  430 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPGPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKIRITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKVESKNALENYAYNMRNIVKDEKIGAKLSEADKKKIEEAIDASIQWLDGNQLAEADEFDDKMKELESICNPIIAKMYQGAGGDMGGGMEDEGPTSGGGAGPKIEE 645          
BLAST of CF833016 vs. ExPASy Swiss-Prot
Match: HSP7C_PETHY (Heat shock cognate 70 kDa protein OS=Petunia hybrida GN=HSP70 PE=2 SV=1)

HSP 1 Score: 361.688 bits (927), Expect = 2.901e-99
Identity = 184/222 (82.88%), Postives = 196/222 (88.29%), Query Frame = -2
Query:  178 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ----XXXXXXXXXXXXXXXXXGSGAGPKIEEVD 831
            KEQVFSTYSDNQPGVLIQVYEGER RT+DNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSK+EIE+MVQEAEKYKSEDEE KKKVEAKNALENYAYNMRNT+KD+KI S+L+ ADKK+IEDAID+AI+WLD+NQLAEADEFEDKMKELESICNPIIAKMYQ                      +GAGPKIEEVD
Sbjct:  430 KEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIERMVQEAEKYKSEDEELKKKVEAKNALENYAYNMRNTIKDDKINSQLSAADKKRIEDAIDEAIKWLDNNQLAEADEFEDKMKELESICNPIIAKMYQGGAGGATMDEDGPSVGGSAGSQTGAGPKIEEVD 651          
BLAST of CF833016 vs. ExPASy Swiss-Prot
Match: HSP72_ARATH (Heat shock cognate 70 kDa protein 2 OS=Arabidopsis thaliana GN=HSC70-2 PE=2 SV=2)

HSP 1 Score: 360.533 bits (924), Expect = 6.462e-99
Identity = 181/224 (80.80%), Postives = 193/224 (86.16%), Query Frame = -2
Query:  178 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ------XXXXXXXXXXXXXXXXXGSGAGPKIEEVD 831
            KEQVFSTYSDNQPGVLIQV+EGER RT+DNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTG+KNKITITNDKGRLSK++IEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNT++DEKIG KL  ADKKK+ED+I++AIQWLD NQL EADEFEDKMKELES+CNPIIAKMYQ                         GAGPKIEEVD
Sbjct:  430 KEQVFSTYSDNQPGVLIQVFEGERARTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGKKNKITITNDKGRLSKEDIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIRDEKIGEKLPAADKKKVEDSIEEAIQWLDGNQLGEADEFEDKMKELESVCNPIIAKMYQGGAGGEAGGPGASGMDEDEAPPASGGAGPKIEEVD 653          
BLAST of CF833016 vs. ExPASy Swiss-Prot
Match: HSP71_SOLLC (Heat shock cognate 70 kDa protein 1 OS=Solanum lycopersicum GN=HSC-I PE=2 SV=1)

HSP 1 Score: 349.747 bits (896), Expect = 1.141e-95
Identity = 184/220 (83.64%), Postives = 191/220 (86.82%), Query Frame = -2
Query:  178 KEQVFSTYSDNQPGVLIQVYEGER-TRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ-XXXXXXXXXXXXXXXXXGSGAGPKIEEVD 831
            KEQVFSTYSDNQPGVLIQV+EGER  RTRDNNLLGKFELS IPPAPR VPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSK+EIEKMVQEAEKYK+EDEE KKKVEAKN+LENYAYNMRNTVKDEKIGSKL+  DKKKIEDA+DQAI WL+SNQLAE DEFEDKMKELE ICNPIIAKMYQ                  GS AGPKIEEVD
Sbjct:  431 KEQVFSTYSDNQPGVLIQVFEGERRARTRDNNLLGKFELSVIPPAPRVVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEELKKKVEAKNSLENYAYNMRNTVKDEKIGSKLSSDDKKKIEDAVDQAISWLESNQLAEVDEFEDKMKELEGICNPIIAKMYQGAGGDAGVPMDDDAPPSGGSSAGPKIEEVD 650          
BLAST of CF833016 vs. ExPASy Swiss-Prot
Match: HSP70_MAIZE (Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=3 SV=2)

HSP 1 Score: 347.821 bits (891), Expect = 4.334e-95
Identity = 179/220 (81.36%), Postives = 188/220 (85.45%), Query Frame = -2
Query:  178 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY--QXXXXXXXXXXXXXXXXXGSGAGPKIEEVD 831
            KEQVFSTYSDNQPGVLIQVYEGER RT+DNNLLGKFELSGIPPAPRGVPQITV FDID N ILNVSAEDKTTGQKNKITITNDKGRLSK+EIEKMVQEAEKYK+EDEE KKKV+AKNALENYAYNMRNT+KD+KI SKL   DKKKIEDA+D AI WLDSNQLAE +EFEDKMKELE ICNPIIAKMY  +                 GSGAGPKIEEVD
Sbjct:  426 KEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQITVTFDIDVNNILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEVKKKVDAKNALENYAYNMRNTIKDDKIASKLPAEDKKKIEDAVDGAISWLDSNQLAEVEEFEDKMKELEGICNPIIAKMYXGEGAGMGAAAGMDEDAPSGGSGAGPKIEEVD 645          
BLAST of CF833016 vs. ExPASy Swiss-Prot
Match: HSP70_SOYBN (Heat shock 70 kDa protein OS=Glycine max GN=HSP70 PE=3 SV=1)

HSP 1 Score: 338.961 bits (868), Expect = 2.013e-92
Identity = 167/218 (76.61%), Postives = 187/218 (85.78%), Query Frame = -2
Query:  178 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQXXXXXXXXXXXXXXXXXGSGAGPKIEEVD 831
            KEQ+FSTYSDNQPGVLIQV+EGER RT+DNNLLGKFEL+GIPPAPRGVPQ+ VCFDIDANGILNVSAEDKT G KNKITITNDKGRLSK+EIEKMV++AE+YK+EDEE KKKVEAKN+LENYAYNMRNT+KDEKIG KL+P +K+KIE A++ AIQWL+ NQ+AE DEFEDK KELE ICNPIIAKMYQ                  +GAGPKIEEVD
Sbjct:  429 KEQIFSTYSDNQPGVLIQVFEGERARTKDNNLLGKFELTGIPPAPRGVPQVNVCFDIDANGILNVSAEDKTAGVKNKITITNDKGRLSKEEIEKMVKDAERYKAEDEEVKKKVEAKNSLENYAYNMRNTIKDEKIGGKLSPDEKQKIEKAVEDAIQWLEGNQMAEVDEFEDKQKELEGICNPIIAKMYQ-GAAGPGGDVPMGADMPAAGAGPKIEEVD 645          
BLAST of CF833016 vs. ExPASy Swiss-Prot
Match: HSP70_LUPPO (Heat shock 70 kDa protein (Fragment) OS=Lupinus polyphyllus PE=2 SV=2)

HSP 1 Score: 323.939 bits (829), Expect = 6.703e-88
Identity = 167/220 (75.91%), Postives = 179/220 (81.36%), Query Frame = -2
Query:  178 KEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ--XXXXXXXXXXXXXXXXXGSGAGPKIEEVD 831
            KEQVFSTYSD +PGVLIQV+EGERTRTRDNNLLGKFELSGIPPAPR VPQITVCFDIDAN  LNVSAEDKTTGQKNKITITNDKGRLSK++IEKMVQE EKYK+EDEE KKKV+ KNALENYAY+MRNT+ D+KI SKL   DKKKIED +D AI  LD NQL E +EFEDKMKELES+CNPIIAKMYQ                     GAGPKI EVD
Sbjct:   38 KEQVFSTYSDKEPGVLIQVFEGERTRTRDNNLLGKFELSGIPPAPRDVPQITVCFDIDANWCLNVSAEDKTTGQKNKITITNDKGRLSKEDIEKMVQEVEKYKAEDEEVKKKVDTKNALENYAYSMRNTITDDKITSKLPTEDKKKIEDTVDGAISRLDGNQLPEVEEFEDKMKELESLCNPIIAKMYQGVLAQMVLVLLIMADAPTGSGGAGPKIGEVD 257          
The following BLAST results are available for this feature:
BLAST of CF833016 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP71_ARATH2.373e-10184.68Heat shock cognate 70 kDa protein 1 OS=Arabidopsis... [more]
HSP72_SOLLC1.538e-10085.78Heat shock cognate 70 kDa protein 2 OS=Solanum lyc... [more]
HSP73_ARATH3.426e-10084.09Heat shock cognate 70 kDa protein 3 OS=Arabidopsis... [more]
HSP7E_SPIOL5.845e-10085.19Chloroplast envelope membrane 70 kDa heat shock-re... [more]
HSP7C_PETHY2.901e-9982.88Heat shock cognate 70 kDa protein OS=Petunia hybri... [more]
HSP72_ARATH6.462e-9980.80Heat shock cognate 70 kDa protein 2 OS=Arabidopsis... [more]
HSP71_SOLLC1.141e-9583.64Heat shock cognate 70 kDa protein 1 OS=Solanum lyc... [more]
HSP70_MAIZE4.334e-9581.36Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=... [more]
HSP70_SOYBN2.013e-9276.61Heat shock 70 kDa protein OS=Glycine max GN=HSP70 ... [more]
HSP70_LUPPO6.703e-8875.91Heat shock 70 kDa protein (Fragment) OS=Lupinus po... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02N04_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02N04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833016 ID=CF833016; Name=CF833016; organism=Citrus sinensis; type=EST; length=832bp
CCTTTTTTTTTTTTAGAGAACACTTGCAATGGGGCTTTTGAACAGACTTG
TAAAACATCAATCAAAACCCAATAATAGTCAAAAGCATGAAAATAAAATT
AAAATTCCGAAACATCTAATCACCCTACCAACTTAACCCTCAACAGACAA
AAGCCAGCAGAAAACGAGAGCTGCTTAGTCTACCTCCTCAATCTTGGGGC
CAGCACCGCTACCACCAGCAGGAACATCGTCATCCATGGCACCACCCATG
TCACCACCGGCACCCTGGTACATCTTTGCAATGATGGGGTTGCAGATGCT
CTCTAATTCCTTCATCTTATCCTCAAACTCATCAGCCTCTGCAAGCTGGT
TGCTGTCCAACCATTGGATGGCCTGGTCGATCGCATCTTCAATCTTCTTC
TTATCCGCTGGTGCAAGCTTGGAACCAATCTTCTCGTCCTTCACTGTGTT
CCTCATGTTGTATGCATAGTTCTCCAAGGCATTCTTTGCCTCAACCTTCT
TCTTGTGCTCTTCATCTTCAGACTTGTATTTCTCCGCCTCTTGAACCATC
TTCTCAATTTCATCCTTTGAAAGTCTTCCTTTGTCATTAGTGATGGTGAT
CTTGTTCTTTTGACCAGTGGTCTTGTCCTCGGCAGACACATTCAGGATAC
CATTGGCATCGATGTCGAAGCACACAGTGATTTGAGGAACACCCCTAGGA
GCTGGGGGAATACCAGAGAGCTCGAATTTACCCAACAAGTTATTGTCCCT
GGTTCTTGTCCTTTCACCTTCATAGACTTGGATCAACACACCAGGTTGGT
TGTCAGAGTAAGTTGAGAAGACCTGCTCCTTC
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