CF833017

Overview
NameCF833017
Unique NameCF833017
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length712
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11598 contig Csv1_Contig11598:306..1017. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF833017 vs. ExPASy Swiss-Prot
Match: HSP71_ARATH (Heat shock cognate 70 kDa protein 1 OS=Arabidopsis thaliana GN=HSC70-1 PE=1 SV=3)

HSP 1 Score: 393.66 bits (1010), Expect = 5.252e-109
Identity = 199/237 (83.97%), Postives = 205/237 (86.50%), Query Frame = 2
Query:    2 FNGTELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIPWLDSNQLAEAD 712
            FNG ELCKSINPDE           ILSGEGNEKVQD             ETAGGVMT LIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGER RT+DNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNT++DEKIG KL  ADKKKIED+I+QAI WL+ NQLAEAD
Sbjct:  360 FNGKELCKSINPDEAVAYGAAVQGAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTTLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIQDEKIGEKLPAADKKKIEDSIEQAIQWLEGNQLAEAD 596          
BLAST of CF833017 vs. ExPASy Swiss-Prot
Match: HSP72_SOLLC (Heat shock cognate 70 kDa protein 2 OS=Solanum lycopersicum GN=HSC-2 PE=2 SV=1)

HSP 1 Score: 391.734 bits (1005), Expect = 1.996e-108
Identity = 199/237 (83.97%), Postives = 205/237 (86.50%), Query Frame = 2
Query:    2 FNGTELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIPWLDSNQLAEAD 712
            FNG ELCKSINPDE           ILSGEGNEKVQD             ETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANG LNVSAEDKTTGQKNKITITNDKGRLSK+EIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNT+KDEKI SKL+  D+ KIEDAI+QAI WLD NQLAEA+
Sbjct:  360 FNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGTLNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIKDEKIASKLSADDRTKIEDAIEQAIQWLDGNQLAEAE 596          
BLAST of CF833017 vs. ExPASy Swiss-Prot
Match: HSP7E_SPIOL (Chloroplast envelope membrane 70 kDa heat shock-related protein OS=Spinacia oleracea GN=SCE70 PE=1 SV=3)

HSP 1 Score: 389.808 bits (1000), Expect = 7.584e-108
Identity = 198/237 (83.54%), Postives = 204/237 (86.08%), Query Frame = 2
Query:    2 FNGTELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIPWLDSNQLAEAD 712
            FNG ELCKSINPDE           ILSGEGNEKVQD             ETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPP PRGVPQI VCFDIDANGILNVSAEDKTTGQKNKI ITNDKGRLSK+EIEKMVQEAEKYKSEDEEHKKKVE+KNALENYAYNMRN VKDEKIG+KL+ ADKKKIE+AID +I WLD NQLAEAD
Sbjct:  360 FNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPGPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKIRITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKVESKNALENYAYNMRNIVKDEKIGAKLSEADKKKIEEAIDASIQWLDGNQLAEAD 596          
BLAST of CF833017 vs. ExPASy Swiss-Prot
Match: HSP73_ARATH (Heat shock cognate 70 kDa protein 3 OS=Arabidopsis thaliana GN=HSC70-3 PE=1 SV=1)

HSP 1 Score: 387.111 bits (993), Expect = 4.916e-107
Identity = 196/237 (82.70%), Postives = 204/237 (86.08%), Query Frame = 2
Query:    2 FNGTELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIPWLDSNQLAEAD 712
            FNG ELCKSINPDE           ILSGEGNEKVQD             ETAGGVMTVLI RNTTIPTKKEQVFSTYSDNQPGVLIQVYEGER RT+DNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKV+AKNALENYAYNMRNT++DEKIG KLA  DKKKIED+I+ AI WL++NQLAE D
Sbjct:  360 FNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIQRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVDAKNALENYAYNMRNTIRDEKIGEKLAGDDKKKIEDSIEAAIEWLEANQLAECD 596          
BLAST of CF833017 vs. ExPASy Swiss-Prot
Match: HSP7C_PETHY (Heat shock cognate 70 kDa protein OS=Petunia hybrida GN=HSP70 PE=2 SV=1)

HSP 1 Score: 386.726 bits (992), Expect = 6.420e-107
Identity = 196/237 (82.70%), Postives = 206/237 (86.92%), Query Frame = 2
Query:    2 FNGTELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIPWLDSNQLAEAD 712
            FNG ELCKSINPDE           ILSGEGNEKVQD             ETAGG MTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGER RT+DNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSK+EIE+MVQEAEKYKSEDEE KKKVEAKNALENYAYNMRNT+KD+KI S+L+ ADKK+IEDAID+AI WLD+NQLAEAD
Sbjct:  360 FNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGGMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIERMVQEAEKYKSEDEELKKKVEAKNALENYAYNMRNTIKDDKINSQLSAADKKRIEDAIDEAIKWLDNNQLAEAD 596          
BLAST of CF833017 vs. ExPASy Swiss-Prot
Match: HSP72_ARATH (Heat shock cognate 70 kDa protein 2 OS=Arabidopsis thaliana GN=HSC70-2 PE=2 SV=2)

HSP 1 Score: 383.645 bits (984), Expect = 5.435e-106
Identity = 192/237 (81.01%), Postives = 203/237 (85.65%), Query Frame = 2
Query:    2 FNGTELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIPWLDSNQLAEAD 712
            FNG ELCKSINPDE           ILSGEGNEKVQD             ETAGGVMT LI RNTTIPTKKEQVFSTYSDNQPGVLIQV+EGER RT+DNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTG+KNKITITNDKGRLSK++IEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNT++DEKIG KL  ADKKK+ED+I++AI WLD NQL EAD
Sbjct:  360 FNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTTLIQRNTTIPTKKEQVFSTYSDNQPGVLIQVFEGERARTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGKKNKITITNDKGRLSKEDIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIRDEKIGEKLPAADKKKVEDSIEEAIQWLDGNQLGEAD 596          
BLAST of CF833017 vs. ExPASy Swiss-Prot
Match: HSP71_SOLLC (Heat shock cognate 70 kDa protein 1 OS=Solanum lycopersicum GN=HSC-I PE=2 SV=1)

HSP 1 Score: 379.407 bits (973), Expect = 1.025e-104
Identity = 197/238 (82.77%), Postives = 204/238 (85.71%), Query Frame = 2
Query:    2 FNGTELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGER-TRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIPWLDSNQLAEAD 712
            FNG ELCKSINPDE           ILSGEGNEKVQD             ETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQV+EGER  RTRDNNLLGKFELS IPPAPR VPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSK+EIEKMVQEAEKYK+EDEE KKKVEAKN+LENYAYNMRNTVKDEKIGSKL+  DKKKIEDA+DQAI WL+SNQLAE D
Sbjct:  361 FNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVFEGERRARTRDNNLLGKFELSVIPPAPRVVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEELKKKVEAKNSLENYAYNMRNTVKDEKIGSKLSSDDKKKIEDAVDQAISWLESNQLAEVD 598          
BLAST of CF833017 vs. ExPASy Swiss-Prot
Match: HSP70_MAIZE (Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=3 SV=2)

HSP 1 Score: 367.466 bits (942), Expect = 4.031e-101
Identity = 189/237 (79.75%), Postives = 198/237 (83.54%), Query Frame = 2
Query:    2 FNGTELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIPWLDSNQLAEAD 712
            FNG ELCKSINPDE           ILSGEGNE+  D             ETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGER RT+DNNLLGKFELSGIPPAPRGVPQITV FDID N ILNVSAEDKTTGQKNKITITNDKGRLSK+EIEKMVQEAEKYK+EDEE KKKV+AKNALENYAYNMRNT+KD+KI SKL   DKKKIEDA+D AI WLDSNQLAE +
Sbjct:  357 FNGKELCKSINPDEAVAYGAAVQAAILSGEGNER-SDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQITVTFDIDVNNILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEVKKKVDAKNALENYAYNMRNTIKDDKIASKLPAEDKKKIEDAVDGAISWLDSNQLAEVE 592          
BLAST of CF833017 vs. ExPASy Swiss-Prot
Match: HSP70_SOYBN (Heat shock 70 kDa protein OS=Glycine max GN=HSP70 PE=3 SV=1)

HSP 1 Score: 363.999 bits (933), Expect = 4.456e-100
Identity = 179/237 (75.53%), Postives = 200/237 (84.39%), Query Frame = 2
Query:    2 FNGTELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIPWLDSNQLAEAD 712
            FNG ELCKSINPDE           ILSG+G+EKVQD             ETAGGVMTVLIPRNTTIPTKKEQ+FSTYSDNQPGVLIQV+EGER RT+DNNLLGKFEL+GIPPAPRGVPQ+ VCFDIDANGILNVSAEDKT G KNKITITNDKGRLSK+EIEKMV++AE+YK+EDEE KKKVEAKN+LENYAYNMRNT+KDEKIG KL+P +K+KIE A++ AI WL+ NQ+AE D
Sbjct:  359 FNGKELCKSINPDEAVAYGAAVQAAILSGQGDEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVFEGERARTKDNNLLGKFELTGIPPAPRGVPQVNVCFDIDANGILNVSAEDKTAGVKNKITITNDKGRLSKEEIEKMVKDAERYKAEDEEVKKKVEAKNSLENYAYNMRNTIKDEKIGGKLSPDEKQKIEKAVEDAIQWLEGNQMAEVD 595          
BLAST of CF833017 vs. ExPASy Swiss-Prot
Match: HSP70_DAUCA (Heat shock 70 kDa protein OS=Daucus carota GN=HSP70 PE=3 SV=1)

HSP 1 Score: 343.584 bits (880), Expect = 6.233e-94
Identity = 179/241 (74.27%), Postives = 192/241 (79.67%), Query Frame = 2
Query:    2 FNGTELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGK----FELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLAPADKKKIEDAIDQAIPWLDSNQLAEAD 712
            FNG ELCKSINPDE           ILSGEGNE+  D             ETAGGVMTVLIPRNTTIPTKKEQ+FSTYSDNQPGVLIQVYEGER RTRDN LLGK    FEL+GIPPAPRGVPQI V FDIDANGILNV AEDKT G KNKITITND GRLSKDEIEK+V+EAEKYK+EDEE KKKVEAKNALENYAYNMRNT+KD+KI  KL   DK+KIE A+++AI WL+ NQLAE D
Sbjct:  359 FNGKELCKSINPDEAVAYGAAVQAAILSGEGNER-SDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTRDNKLLGKLLGKFELTGIPPAPRGVPQINVVFDIDANGILNVFAEDKTAGVKNKITITNDNGRLSKDEIEKLVKEAEKYKAEDEEVKKKVEAKNALENYAYNMRNTIKDDKIPGKLDAGDKEKIETAVNEAIEWLEKNQLAEVD 598          
The following BLAST results are available for this feature:
BLAST of CF833017 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP71_ARATH5.252e-10983.97Heat shock cognate 70 kDa protein 1 OS=Arabidopsis... [more]
HSP72_SOLLC1.996e-10883.97Heat shock cognate 70 kDa protein 2 OS=Solanum lyc... [more]
HSP7E_SPIOL7.584e-10883.54Chloroplast envelope membrane 70 kDa heat shock-re... [more]
HSP73_ARATH4.916e-10782.70Heat shock cognate 70 kDa protein 3 OS=Arabidopsis... [more]
HSP7C_PETHY6.420e-10782.70Heat shock cognate 70 kDa protein OS=Petunia hybri... [more]
HSP72_ARATH5.435e-10681.01Heat shock cognate 70 kDa protein 2 OS=Arabidopsis... [more]
HSP71_SOLLC1.025e-10482.77Heat shock cognate 70 kDa protein 1 OS=Solanum lyc... [more]
HSP70_MAIZE4.031e-10179.75Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=... [more]
HSP70_SOYBN4.456e-10075.53Heat shock 70 kDa protein OS=Glycine max GN=HSP70 ... [more]
HSP70_DAUCA6.233e-9474.27Heat shock 70 kDa protein OS=Daucus carota GN=HSP7... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02N04_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02N04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833017 ID=CF833017; Name=CF833017; organism=Citrus sinensis; type=EST; length=712bp
CTTTAATGGGACGGAGCTTTGCAAGAGCATCAACCCCGATGAGGCTGTTG
CCTATGGTGCTGCTGTGCAAGCTGCTATCTTGAGTGGTGAGGGTAATGAG
AAGGTGCAGGATCTTCTGCTATTGGATGTCACGCCTCTCTCCCTTGGTTT
GGAGACTGCTGGTGGTGTCATGACTGTGTTGATTCCAAGGAACACGACCA
TTCCCACCAAGAAGGAGCAGGTCTTCTCAACTTACTCTGACAACCAACCT
GGTGTGTTGATCCAAGTCTATGAAGGTGAAAGGACAAGAACCAGGGACAA
TAACTTGTTGGGTAAATTCGAGCTCTCTGGTATTCCCCCAGCTCCTAGGG
GTGTTCCTCAAATCACTGTGTGCTTCGACATCGATGCCAATGGTATCCTG
AATGTGTCTGCCGAGGACAAGACCACTGGTCAAAAGAACAAGATCACCAT
CACTAATGACAAAGGAAGACTTTCAAAGGATGAAATTGAGAAGATGGTTC
AAGAGGCGGAGAAATACAAGTCTGAAGATGAAGAGCACAAGAAGAAGGTT
GAGGCAAAGAATGCCTTGGAGAACTATGCATACAACATGAGGAACACAGT
GAAGGACGAGAAGATTGGTTCCAAGCTTGCACCAGCGGATAAGAAGAAGA
TTGAAGATGCGATCGACCAGGCCATCCCATGGTTGGACAGCAACCAGCTT
GCAGAGGCTGAT
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