CF833022

Overview
NameCF833022
Unique NameCF833022
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length512
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF833022 vs. ExPASy Swiss-Prot
Match: 7SB1_SOYBN (Basic 7S globulin OS=Glycine max GN=BG PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 1.311e-15
Identity = 47/118 (39.83%), Postives = 67/118 (56.78%), Query Frame = 1 
Query:   25 KVTRVAPVVPFGACFNSRDIGSSRLGPSVPQIDLVLQNSK-VLWSIIGANSIVRVSNDVSCLGFVDGGVTPKTSIVIGGHQLDNNLVQFDIASSRLGFSNSLLLQR-TMCSN-FNFTS 369
            K  +V  V PFG CFNS  I +       P +DLV+      +W I G + +V+    V+CLG ++GG+ P+  I +G  QL+ NLV FD+A SR+GFS S L      C++ FNF +
Sbjct:  315 KQAQVKSVAPFGLCFNSNKINA------YPSVDLVMDKPNGPVWRISGEDLMVQAQPGVTCLGVMNGGMQPRAEITLGARQLEENLVVFDLARSRVGFSTSSLHSHGVKCADLFNFAN 426
[Close]
BLAST of CF833022 vs. ExPASy Swiss-Prot
Match: 7SBG2_SOYBN (Basic 7S globulin 2 OS=Glycine max PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 4.219e-14
Identity = 44/118 (37.29%), Postives = 65/118 (55.08%), Query Frame = 1 
Query:   25 KVTRVAPVVPFGACFNSRDIGSSRLGPSVPQIDLVLQNSK-VLWSIIGANSIVRVSNDVSCLGFVDGGVTPKTSIVIGGHQLDNNLVQFDIASSRLGFSNSLLLQR-TMCSN-FNFTS 369
            K  +V  V PFG CFNS  I +       P +DLV+      +W I G + +V+    V+CLG ++GG+ P+  + +G  QL+  L+ FD+A SR+GFS S L      C + FNF +
Sbjct:  321 KQAQVKSVAPFGLCFNSNKINA------YPSVDLVMDKPNGPVWRISGEDLMVQAQPGVTCLGVMNGGMQPRAEVTLGTRQLEEKLMVFDLARSRVGFSTSSLHSHGVKCGDLFNFAN 432
The following BLAST results are available for this feature:
BLAST of CF833022 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
7SB1_SOYBN1.311e-1539.83Basic 7S globulin OS=Glycine max GN=BG PE=1 SV=2[more]
7SBG2_SOYBN4.219e-1437.29Basic 7S globulin 2 OS=Glycine max PE=1 SV=1[more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_02N08_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02N08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833022 ID=CF833022; Name=CF833022; organism=Citrus sinensis; type=EST; length=512bp
GCTTTTGTAACTGTCATGCCAACGAAGGTCACCAGGGTGGCTCCAGTTGT
GCCATTTGGGGCATGCTTTAACTCCAGGGACATTGGAAGCTCCCGTCTTG
GACCATCTGTGCCTCAAATCGATCTCGTTTTGCAGAATAGCAAAGTGCTC
TGGAGCATCATCGGGGCAAATTCAATCGTCCGGGTCAGCAACGATGTGTC
TTGCCTAGGGTTTGTGGATGGAGGGGTGACGCCAAAGACTTCAATTGTTA
TTGGAGGGCATCAATTGGACAACAATCTTGTTCAGTTTGATATAGCTTCT
TCGAGACTTGGGTTCAGCAATTCGTTACTCCTCCAGCGAACAATGTGCTC
CAACTTCAACTTCACATCCACTTAGTTATGCATTTAAGAGGTGTCGATAT
TAATGAACCAATAAATGGGACATGGACGGCATGGACCCACAGTTGTAATG
ATTTCACCAATGTACCTCGCAAAAACTACGTGGCATTATATTGCAGAAAA
AAAAAAAAAAAA
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