CF833041

Overview
NameCF833041
Unique NameCF833041
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length619
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13130 contig Csv1_Contig13130:873..1491. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF833041 vs. ExPASy Swiss-Prot
Match: ALEU_ARATH (Thiol protease aleurain OS=Arabidopsis thaliana GN=ALEU PE=1 SV=2)

HSP 1 Score: 227.254 bits (578), Expect = 5.017e-59
Identity = 104/121 (85.95%), Postives = 114/121 (94.21%), Query Frame = 2
Query:    2 CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 364
            CKFS+ENVGVQVL+SVNITLGAEDEL+HAVGLVRPVS+AFEV+  FR YKSGVY+ + CG+TPMDVNHAV+AVGYGVEDGVPYWLIKNSWG +WGD GYFKMEMGKNMCGIATCASYPVVA
Sbjct:  238 CKFSAENVGVQVLNSVNITLGAEDELKHAVGLVRPVSIAFEVIHSFRLYKSGVYTDSHCGSTPMDVNHAVLAVGYGVEDGVPYWLIKNSWGADWGDKGYFKMEMGKNMCGIATCASYPVVA 358          
BLAST of CF833041 vs. ExPASy Swiss-Prot
Match: CYSP2_MAIZE (Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 1.906e-58
Identity = 103/121 (85.12%), Postives = 112/121 (92.56%), Query Frame = 2
Query:    2 CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 364
            CKF +ENVGV+VLDSVNITLGAEDEL+ AVGLVRPVSVAFEV+ GFR YKSGVY+S  CG TPMDVNHAV+AVGYGVEDGVPYWLIKNSWG +WGD GYFKMEMGKNMCG+ATCASYP+VA
Sbjct:  240 CKFKNENVGVKVLDSVNITLGAEDELKDAVGLVRPVSVAFEVITGFRLYKSGVYTSDHCGTTPMDVNHAVLAVGYGVEDGVPYWLIKNSWGADWGDEGYFKMEMGKNMCGVATCASYPIVA 360          
BLAST of CF833041 vs. ExPASy Swiss-Prot
Match: ALEUL_ARATH (Thiol protease aleurain-like OS=Arabidopsis thaliana GN=At3g45310 PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 9.461e-58
Identity = 102/121 (84.30%), Postives = 112/121 (92.56%), Query Frame = 2
Query:    2 CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 364
            CKFS++N+GVQV DSVNITLGAEDEL+HAVGLVRPVSVAFEVV  FRFYK GV++S  CGNTPMDVNHAV+AVGYGVED VPYWLIKNSWG  WGD+GYFKMEMGKNMCG+ATC+SYPVVA
Sbjct:  238 CKFSAKNIGVQVRDSVNITLGAEDELKHAVGLVRPVSVAFEVVHEFRFYKKGVFTSNTCGNTPMDVNHAVLAVGYGVEDDVPYWLIKNSWGGEWGDNGYFKMEMGKNMCGVATCSSYPVVA 358          
BLAST of CF833041 vs. ExPASy Swiss-Prot
Match: ORYC_ORYSJ (Oryzain gamma chain OS=Oryza sativa subsp. japonica GN=Os09g0442300 PE=2 SV=2)

HSP 1 Score: 218.779 bits (556), Expect = 1.784e-56
Identity = 99/121 (81.82%), Postives = 113/121 (93.39%), Query Frame = 2
Query:    2 CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 364
            C +  ENVGV+VLDSVNITLGAEDEL++AVGLVRPVSVAF+V++GFR YKSGVY+S  CG +PMDVNHAV+AVGYGVE+GVPYWLIKNSWG +WGD+GYFKMEMGKNMCGIATCASYP+VA
Sbjct:  242 CHYKPENVGVKVLDSVNITLGAEDELKNAVGLVRPVSVAFQVINGFRMYKSGVYTSDHCGTSPMDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDNGYFKMEMGKNMCGIATCASYPIVA 362          
BLAST of CF833041 vs. ExPASy Swiss-Prot
Match: CYSP3_SOLLC (Cysteine proteinase 3 OS=Solanum lycopersicum GN=CYP-3 PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 1.670e-54
Identity = 96/121 (79.34%), Postives = 111/121 (91.74%), Query Frame = 2
Query:    2 CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 364
            CKFS  N+GV+V+ SVNITLGAE EL++AV LVRPVSVAFEVV GF+ YKSGVY+ST+CG+TPMDVNHAV+AVGYGVE+G PYWLIKNSWG +WG+ GYFKMEMGKNMCG+ATCASYP+VA
Sbjct:  236 CKFSQANIGVKVISSVNITLGAEYELKYAVALVRPVSVAFEVVKGFKQYKSGVYASTECGDTPMDVNHAVLAVGYGVENGTPYWLIKNSWGADWGEDGYFKMEMGKNMCGVATCASYPIVA 356          
BLAST of CF833041 vs. ExPASy Swiss-Prot
Match: ALEU_HORVU (Thiol protease aleurain OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 1.670e-54
Identity = 98/121 (80.99%), Postives = 109/121 (90.08%), Query Frame = 2
Query:    2 CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 364
            C + +EN  VQVLDSVNITL AEDEL++AVGLVRPVSVAF+V+DGFR YKSGVY+S  CG TP DVNHAV+AVGYGVE+GVPYWLIKNSWG +WGD+GYFKMEMGKNMC IATCASYPVVA
Sbjct:  241 CHYKAENAAVQVLDSVNITLNAEDELKNAVGLVRPVSVAFQVIDGFRQYKSGVYTSDHCGTTPDDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDNGYFKMEMGKNMCAIATCASYPVVA 361          
BLAST of CF833041 vs. ExPASy Swiss-Prot
Match: CATH_RAT (Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 7.049e-37
Identity = 70/119 (58.82%), Postives = 85/119 (71.43%), Query Frame = 2
Query:    2 CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPV 358
            CKF+ E     V + VNITL  E  +  AV L  PVS AFEV + F  YKSGVYSS  C  TP  VNHAV+AVGYG ++G+ YW++KNSWG NWG++GYF +E GKNMCG+A CASYP+
Sbjct:  212 CKFNPEKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEVTEDFMMYKSGVYSSNSCHKTPDKVNHAVLAVGYGEQNGLLYWIVKNSWGSNWGNNGYFLIERGKNMCGLAACASYPI 330          
BLAST of CF833041 vs. ExPASy Swiss-Prot
Match: CATH_PIG (Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.570e-36
Identity = 67/119 (56.30%), Postives = 83/119 (69.75%), Query Frame = 2
Query:    2 CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPV 358
            CKF  +     V D  NIT+  E+ +  AV L  PVS AFEV + F  Y+ G+YSST C  TP  VNHAV+AVGYG E+G+PYW++KNSWG  WG +GYF +E GKNMCG+A CASYP+
Sbjct:  214 CKFQPDKAIAFVKDVANITMNDEEAMVEAVALYNPVSFAFEVTNDFLMYRKGIYSSTSCHKTPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASYPI 332          
BLAST of CF833041 vs. ExPASy Swiss-Prot
Match: CATH_BOVIN (Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.736e-35
Identity = 67/119 (56.30%), Postives = 80/119 (67.23%), Query Frame = 2
Query:    2 CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPV 358
            CK+        V D  NITL  E+ +  AV L  PVS AFEV   F  Y+ G+YSST C  TP  VNHAV+AVGYG E G+PYW++KNSWG NWG  GYF +E GKNMCG+A CAS+P+
Sbjct:  214 CKYQPSKAIAFVKDVANITLNDEEAMVEAVALHNPVSFAFEVTADFMMYRKGIYSSTSCHKTPDKVNHAVLAVGYGEEKGIPYWIVKNSWGPNWGMKGYFLIERGKNMCGLAACASFPI 332          
BLAST of CF833041 vs. ExPASy Swiss-Prot
Match: CATH_MOUSE (Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.268e-35
Identity = 67/119 (56.30%), Postives = 84/119 (70.59%), Query Frame = 2
Query:    2 CKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPV 358
            C+F+ +     V + VNITL  E  +  AV L  PVS AFEV + F  YKSGVYSS  C  TP  VNHAV+AVGYG ++G+ YW++KNSWG  WG++GYF +E GKNMCG+A CASYP+
Sbjct:  212 CRFNPQKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEVTEDFLMYKSGVYSSKSCHKTPDKVNHAVLAVGYGEQNGLLYWIVKNSWGSQWGENGYFLIERGKNMCGLAACASYPI 330          
The following BLAST results are available for this feature:
BLAST of CF833041 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 160
Match NameE-valueIdentityDescription
ALEU_ARATH5.017e-5985.95Thiol protease aleurain OS=Arabidopsis thaliana GN... [more]
CYSP2_MAIZE1.906e-5885.12Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=... [more]
ALEUL_ARATH9.461e-5884.30Thiol protease aleurain-like OS=Arabidopsis thalia... [more]
ORYC_ORYSJ1.784e-5681.82Oryzain gamma chain OS=Oryza sativa subsp. japonic... [more]
CYSP3_SOLLC1.670e-5479.34Cysteine proteinase 3 OS=Solanum lycopersicum GN=C... [more]
ALEU_HORVU1.670e-5480.99Thiol protease aleurain OS=Hordeum vulgare PE=2 SV... [more]
CATH_RAT7.049e-3758.82Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1[more]
CATH_PIG1.570e-3656.30Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1[more]
CATH_BOVIN1.736e-3556.30Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1[more]
CATH_MOUSE2.268e-3556.30Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02N21_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02N21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833041 ID=CF833041; Name=CF833041; organism=Citrus sinensis; type=EST; length=619bp
CTGCAAATTCTCATCTGAAAATGTTGGCGTCCAAGTCCTGGACTCAGTCA
ACATTACCTTGGGTGCTGAAGATGAATTACAGCATGCAGTTGGTCTTGTT
CGACCTGTGAGTGTGGCATTTGAAGTAGTAGATGGATTCCGATTTTACAA
GAGTGGAGTTTACAGCAGCACTAAATGTGGAAATACTCCCATGGATGTGA
ACCATGCCGTCGTTGCTGTTGGGTACGGAGTTGAAGATGGTGTTCCATAT
TGGCTGATTAAGAACTCTTGGGGAGAGAACTGGGGCGATCATGGCTACTT
TAAGATGGAGATGGGGAAGAACATGTGTGGTATTGCAACTTGTGCATCAT
ACCCAGTTGTGGCTTATTCTGCTCCTGAAGAAATAGTTGGATCTGGCTAT
CATCAAGTCATTTGCTCATAAAACTTATATTATTTCACTCAAGAATGATA
GCAGAATGGTTGGCTTTATGTACGAAATAAATTCGGAGATTAATGTCCAT
ATAATCTACAATAGCAATGCATGGCTGCTTGATGTTCAAAATAAATTCTG
AGATCTATGTCCATGTAAACAGTCATTGTGACTAGGACACCAACGATGTT
ATATATATTTTGTCAATGC
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