CF833044
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF833044 vs. ExPASy Swiss-Prot
Match: NSA2_DICDI (Ribosome biogenesis protein NSA2 homolog OS=Dictyostelium discoideum GN=nsa2 PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 7.498e-35 Identity = 70/112 (62.50%), Postives = 91/112 (81.25%), Query Frame = -3 Query: 1 MPQGDYIELHRKRNGCRLDHFERKRKKEAREVHQRSEIAQKALGIKGKMFVKKRYAEKALMKKTLAMHEESSSRRKVDDEVQEGAVPAYLLDRENTTGAKVLSNT*SKKKKK 336 MPQGD+IELH+KR G RLDH+E+ RKK AR H+RS IAQK G+K K++ KKRY+EKA MKKT+AMH+E ++++ DD+V+EGAVPAYLLDRE + AKVLSN +K+K+ Sbjct: 1 MPQGDHIELHQKRFGRRLDHYEKVRKKTARAAHKRSAIAQKVTGLKAKLYNKKRYSEKAEMKKTIAMHQERTNKKASDDKVKEGAVPAYLLDREGVSRAKVLSNMVKQKRKE 112
BLAST of CF833044 vs. ExPASy Swiss-Prot
Match: NSA2_HUMAN (Ribosome biogenesis protein NSA2 homolog OS=Homo sapiens GN=TINP1 PE=1 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 5.941e-32 Identity = 64/112 (57.14%), Postives = 90/112 (80.36%), Query Frame = -3 Query: 1 MPQGDYIELHRKRNGCRLDHFERKRKKEAREVHQRSEIAQKALGIKGKMFVKKRYAEKALMKKTLAMHEESSSRRKVDDEVQEGAVPAYLLDRENTTGAKVLSNT*SKKKKK 336 MPQ +YIELHRKR G RLD+ E+KRKKE+RE H+RS+ A+K +G+K K++ K+R+AEK MKKT+ MHE+ ++++K D++ +GAVPAYLLDRE + AKVLSN +K+K+ Sbjct: 1 MPQNEYIELHRKRYGYRLDYHEKKRKKESREAHERSKKAKKMIGLKAKLYHKQRHAEKIQMKKTIKMHEKRNTKQKNDEKTPQGAVPAYLLDREGQSRAKVLSNMIKQKRKE 112
BLAST of CF833044 vs. ExPASy Swiss-Prot
Match: NSA2_RAT (Ribosome biogenesis protein NSA2 homolog OS=Rattus norvegicus GN=Tinp1 PE=2 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 7.759e-32 Identity = 64/112 (57.14%), Postives = 89/112 (79.46%), Query Frame = -3 Query: 1 MPQGDYIELHRKRNGCRLDHFERKRKKEAREVHQRSEIAQKALGIKGKMFVKKRYAEKALMKKTLAMHEESSSRRKVDDEVQEGAVPAYLLDRENTTGAKVLSNT*SKKKKK 336 MPQ +YIELHRKR G RLD+ E+KRKKE RE H+RS+ A+K +G+K K++ K+R+AEK MKKT+ MHE+ ++++K D++ +GAVPAYLLDRE + AKVLSN +K+K+ Sbjct: 1 MPQNEYIELHRKRYGYRLDYHEKKRKKEGREAHERSKKAKKMIGLKAKLYHKQRHAEKIQMKKTIKMHEKRNTKQKDDEKTPQGAVPAYLLDREGQSRAKVLSNMIKQKRKE 112
BLAST of CF833044 vs. ExPASy Swiss-Prot
Match: NSA2_MOUSE (Ribosome biogenesis protein NSA2 homolog OS=Mus musculus GN=Tinp1 PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 7.759e-32 Identity = 64/112 (57.14%), Postives = 89/112 (79.46%), Query Frame = -3 Query: 1 MPQGDYIELHRKRNGCRLDHFERKRKKEAREVHQRSEIAQKALGIKGKMFVKKRYAEKALMKKTLAMHEESSSRRKVDDEVQEGAVPAYLLDRENTTGAKVLSNT*SKKKKK 336 MPQ +YIELHRKR G RLD+ E+KRKKE RE H+RS+ A+K +G+K K++ K+R+AEK MKKT+ MHE+ ++++K D++ +GAVPAYLLDRE + AKVLSN +K+K+ Sbjct: 1 MPQNEYIELHRKRYGYRLDYHEKKRKKEGREAHERSKKAKKMIGLKAKLYHKQRHAEKIQMKKTIKMHEKRNTKQKDDEKTPQGAVPAYLLDREGQSRAKVLSNMIKQKRKE 112
BLAST of CF833044 vs. ExPASy Swiss-Prot
Match: NSA2_BOVIN (Ribosome biogenesis protein NSA2 homolog OS=Bos taurus GN=TINP1 PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 7.759e-32 Identity = 64/112 (57.14%), Postives = 89/112 (79.46%), Query Frame = -3 Query: 1 MPQGDYIELHRKRNGCRLDHFERKRKKEAREVHQRSEIAQKALGIKGKMFVKKRYAEKALMKKTLAMHEESSSRRKVDDEVQEGAVPAYLLDRENTTGAKVLSNT*SKKKKK 336 MPQ +YIELHRKR G RLD+ E+KRKKE RE H+RS+ A+K +G+K K++ K+R+AEK MKKT+ MHE+ ++++K D++ +GAVPAYLLDRE + AKVLSN +K+K+ Sbjct: 1 MPQNEYIELHRKRYGYRLDYHEKKRKKEGREAHERSKKAKKMIGLKAKLYHKQRHAEKIQMKKTIKMHEKRNTKQKNDEKTPQGAVPAYLLDREGQSRAKVLSNMIKQKRKE 112
BLAST of CF833044 vs. ExPASy Swiss-Prot
Match: NSA2_CANGA (Ribosome biogenesis protein NSA2 OS=Candida glabrata GN=NSA2 PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 4.124e-25 Identity = 59/111 (53.15%), Postives = 76/111 (68.47%), Query Frame = -3 Query: 7 MPQGDYIELHRKRNGCRLDHFERKRKKEAREVHQRSEIAQKALGIKGKMFVKKRYAEKALMKKTLAMHEESSSRRKVDDEVQEG-AVPAYLLDRENTTGAKVLSNT*SKKK 336 MPQ DYIE H K++G RLD+ ERKRK+EAREVH+ +E AQK G KGK F KKRYAEK M+K + HE+S ++ G A+P YLLDRE T AK +S++ +K+ Sbjct: 1 MPQNDYIERHIKQHGRRLDYEERKRKREAREVHKVAEKAQKLTGWKGKQFAKKRYAEKVAMRKKIKAHEQSKAKGSSKPLADNGEALPTYLLDREQTNTAKAISSSIKQKR 111
BLAST of CF833044 vs. ExPASy Swiss-Prot
Match: NSA2_ASHGO (Ribosome biogenesis protein NSA2 OS=Ashbya gossypii GN=NSA2 PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 5.386e-25 Identity = 59/111 (53.15%), Postives = 74/111 (66.67%), Query Frame = -3 Query: 7 MPQGDYIELHRKRNGCRLDHFERKRKKEAREVHQRSEIAQKALGIKGKMFVKKRYAEKALMKKTLAMHEESSSRRKVDDEVQEG-AVPAYLLDRENTTGAKVLSNT*SKKK 336 MPQ +YIE H K++G RLDH ERKRK+EARE H+ SE AQK G KGK F KKRYAEK M+K + HE+S + G A+PAYLLDRE AK +S++ +K+ Sbjct: 1 MPQNEYIEQHIKKHGRRLDHEERKRKREAREAHKISEKAQKLTGWKGKQFAKKRYAEKVAMRKKIKAHEQSKLKGAAKPLEDSGEALPAYLLDREQANSAKAISSSIKQKR 111
BLAST of CF833044 vs. ExPASy Swiss-Prot
Match: NSA2_KLULA (Ribosome biogenesis protein NSA2 OS=Kluyveromyces lactis GN=NSA2 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.567e-24 Identity = 62/112 (55.36%), Postives = 76/112 (67.86%), Query Frame = -3 Query: 7 MPQGDYIELHRKRNGCRLDHFERKRKKEAREVHQRSEIAQKALGIKGKMFVKKRYAEKALMKKTLAMHEESSSR--RKVDDEVQEGAVPAYLLDRENTTGAKVLSNT*SKKK 336 MPQ +YIE H K++G RLDH ERKRK+EARE H+ SE AQK G KGK F KKRYAEK MKK + HE+S + K DE E A+P YLLDRE AK +S++ +K+ Sbjct: 1 MPQNEYIEQHIKQHGRRLDHDERKRKREAREAHKISEKAQKLTGWKGKQFAKKRYAEKVAMKKKIRAHEQSKVKGGSKPLDENGE-ALPTYLLDREQNNTAKAISSSIKQKR 111
BLAST of CF833044 vs. ExPASy Swiss-Prot
Match: NSA2_YEAST (Ribosome biogenesis protein NSA2 OS=Saccharomyces cerevisiae GN=NSA2 PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 3.491e-24 Identity = 59/111 (53.15%), Postives = 74/111 (66.67%), Query Frame = -3 Query: 7 MPQGDYIELHRKRNGCRLDHFERKRKKEAREVHQRSEIAQKALGIKGKMFVKKRYAEKALMKKTLAMHEESSSRRKVDDEVQEG-AVPAYLLDRENTTGAKVLSNT*SKKK 336 MPQ DYIE H K++G RLDH ERKRK+EARE H+ SE AQK G KGK F KKRYAEK M+K + HE+S + +G A+P YLLDRE AK +S++ +K+ Sbjct: 1 MPQNDYIERHIKQHGKRLDHEERKRKREARESHKISERAQKLTGWKGKQFAKKRYAEKVSMRKKIKAHEQSKVKGSSKPLDTDGDALPTYLLDREQNNTAKAISSSIKQKR 111
BLAST of CF833044 vs. ExPASy Swiss-Prot
Match: NSA2_YEAS7 (Ribosome biogenesis protein NSA2 OS=Saccharomyces cerevisiae (strain YJM789) GN=NSA2 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 3.491e-24 Identity = 59/111 (53.15%), Postives = 74/111 (66.67%), Query Frame = -3 Query: 7 MPQGDYIELHRKRNGCRLDHFERKRKKEAREVHQRSEIAQKALGIKGKMFVKKRYAEKALMKKTLAMHEESSSRRKVDDEVQEG-AVPAYLLDRENTTGAKVLSNT*SKKK 336 MPQ DYIE H K++G RLDH ERKRK+EARE H+ SE AQK G KGK F KKRYAEK M+K + HE+S + +G A+P YLLDRE AK +S++ +K+ Sbjct: 1 MPQNDYIERHIKQHGKRLDHEERKRKREARESHKISERAQKLTGWKGKQFAKKRYAEKVSMRKKIKAHEQSKVKGSSKPLDTDGDALPTYLLDREQNNTAKAISSSIKQKR 111 The following BLAST results are available for this feature:
BLAST of CF833044 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
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Sequences
The
following sequences are available for this feature:
EST sequence >CF833044 ID=CF833044; Name=CF833044; organism=Citrus sinensis; type=EST; length=356bpback to top |