CF833070
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF833070 vs. ExPASy Swiss-Prot
Match: SYFB_ARATH (Probable phenylalanyl-tRNA synthetase beta chain OS=Arabidopsis thaliana GN=At1g72550 PE=2 SV=1) HSP 1 Score: 313.153 bits (801), Expect = 7.880e-85 Identity = 150/215 (69.77%), Postives = 181/215 (84.19%), Query Frame = 2 Query: 17 TKNVFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVYADGRSYVYPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVLVPPTRSDVLHPCDVMEDVAIAYGYNNIPKRKPASVKPLALNEFSDLMRLEIAMNGFTEVLTWILCSSKEISTMLNRQTDESTAVVGNPRTSDFEVVRTTLMPGILKTIG 661 TKNVFIECTATDLTKAKIVLNTMVT FSE+C RK+++EPVEV Y DG+SY+YPDL+ Y+MEV LS+I +IGVSL+ E+VTSLL RMQL AE++ S +NQ I V VPP+RSDVLHPCDVMEDVAIAYG+NNIP RKPAS+KPL LNE +DL+R+EIAM +TEV+TW+LCS KE MLNR+ S +VGNPR++DFE +R LMPG+LKT+G Sbjct: 249 TKNVFIECTATDLTKAKIVLNTMVTTFSEFCARKFEIEPVEVTYDDGKSYIYPDLAVYDMEVPLSFITDSIGVSLKVEQVTSLLTRMQLQAEQAKSSDNQCAIKVHVPPSRSDVLHPCDVMEDVAIAYGFNNIPTRKPASIKPLTLNELTDLLRIEIAMCVYTEVVTWLLCSHKENFAMLNREDVNSAVIVGNPRSADFEAMRRALMPGLLKTVG 463
BLAST of CF833070 vs. ExPASy Swiss-Prot
Match: SYFB_DROME (Probable phenylalanyl-tRNA synthetase beta chain OS=Drosophila melanogaster GN=CG5706 PE=2 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 3.022e-52 Identity = 107/218 (49.08%), Postives = 145/218 (66.51%), Query Frame = 2 Query: 17 TKNVFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVYADGRSYVYPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVLVPPTRSDVLHPCDVMEDVAIAYGYNNIPKRKPASV---KPLALNEFSDLMRLEIAMNGFTEVLTWILCSSKEISTMLNRQTDESTAV-VGNPRTSDFEVVRTTLMPGILKTI 658 TKNVFIECTATD TKAK+VL+T+V +FSE+C +K+ VEP +VV DG YP+L +S+ N IG+ AE++ +L RM L A+ ++ V +PPTR DV+H CD+ EDVAIAYGYNNI K PA + K LN+ ++ +R ++A GFTE LT+ LCS +I LN+ D AV +GNP+T +F+VVRTTL+PG+LKT+ Sbjct: 248 TKNVFIECTATDRTKAKVVLDTIVCLFSEHCAQKFTVEPCDVVQPDGSVISYPELEVREERISVKRANAYIGIDEPAEKLADMLTRMYLEAKVDGD-----SLVVKIPPTRHDVIHACDIYEDVAIAYGYNNIKKSLPAFMQIAKQFPLNKLTEQLREQVAQAGFTEALTFTLCSRDDIGRKLNKNIDALPAVHIGNPKTLEFQVVRTTLLPGLLKTL 460
BLAST of CF833070 vs. ExPASy Swiss-Prot
Match: SYFB_HUMAN (Phenylalanyl-tRNA synthetase beta chain OS=Homo sapiens GN=FARSB PE=1 SV=2) HSP 1 Score: 197.593 bits (501), Expect = 4.825e-50 Identity = 99/218 (45.41%), Postives = 144/218 (66.06%), Query Frame = 2 Query: 17 TKNVFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVYADGRSYVYPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVLVPPTRSDVLHPCDVMEDVAIAYGYNNIPKRKPAS---VKPLALNEFSDLMRLEIAMNGFTEVLTWILCSSKEISTMLNRQTDESTAV-VGNPRTSDFEVVRTTLMPGILKTI 658 T+N+FIECT TD TKAKIVL+ +VT+FSEYC+ ++ VE EVV+ +G+S+ +P+L+ V IN +G+ E + LL RM L +E GN I + +PPTR+D++H CD++ED AIAYGYNNI P + LN+ ++L+R ++A GFTE LT+ LCS ++I+ L + AV + NP+T++F+V RTTL+PG+LKTI Sbjct: 248 TRNIFIECTGTDFTKAKIVLDIIVTMFSEYCENQFTVEAAEVVFPNGKSHTFPELAYRKEMVRADLINKKVGIRETPENLAKLLTRMYLKSEVIGDGN---QIEIEIPPTRADIIHACDIVEDAAIAYGYNNIQMTLPKTYTIANQFPLNKLTELLRHDMAAAGFTEALTFALCSQEDIADKLGVDISATKAVHISNPKTAEFQVARTTLLPGLLKTI 462
BLAST of CF833070 vs. ExPASy Swiss-Prot
Match: SYFB_PONAB (Phenylalanyl-tRNA synthetase beta chain OS=Pongo abelii GN=FARSB PE=2 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 6.968e-49 Identity = 97/218 (44.50%), Postives = 144/218 (66.06%), Query Frame = 2 Query: 17 TKNVFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVYADGRSYVYPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVLVPPTRSDVLHPCDVMEDVAIAYGYNNIPKRKPAS---VKPLALNEFSDLMRLEIAMNGFTEVLTWILCSSKEISTMLNRQTDESTAV-VGNPRTSDFEVVRTTLMPGILKTI 658 T+N+FIECT TD TKAKIVL+ +VT+FSEYC+ ++ VE EVV+ +G+S+ +P+L+ V IN +G+ E + LL RM L +E GN I + +PPTR+D++H CD++ED AIAYGY+NI P + LN+ ++L+R ++A GFTE LT+ LCS ++I+ L + AV + +P+T++F+V RTTL+PG+LKTI Sbjct: 248 TRNIFIECTGTDFTKAKIVLDIIVTMFSEYCENQFTVEAAEVVFPNGKSHTFPELAYRKEMVRADLINKKVGIRETPENLAKLLTRMYLKSEVIGDGN---QIEIEIPPTRADIIHACDIVEDAAIAYGYSNIQMTLPKTYTIANQFPLNKLTELLRHDMAAAGFTEALTFALCSQEDIADKLGVDISATKAVHISSPKTAEFQVARTTLLPGLLKTI 462
BLAST of CF833070 vs. ExPASy Swiss-Prot
Match: SYFB_MOUSE (Phenylalanyl-tRNA synthetase beta chain OS=Mus musculus GN=Farsb PE=2 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 6.968e-49 Identity = 101/218 (46.33%), Postives = 142/218 (65.14%), Query Frame = 2 Query: 17 TKNVFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVYADGRSYVYPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVLVPPTRSDVLHPCDVMEDVAIAYGYNNIPKRKPAS---VKPLALNEFSDLMRLEIAMNGFTEVLTWILCSSKEISTMLNRQTDESTAV-VGNPRTSDFEVVRTTLMPGILKTI 658 T+N+FIECT TD TKAKIVL+ +VT+FSE+C+ ++ VE VEVV +G+S +P+L V IN +G+ + LL RM L +E GN I V +PPTR+DV+H CD++ED AIAYGYNNI P + LN+ ++L+RL++A GFTE LT+ LCS ++I+ L + AV + NP+T++F+V RTTL+PG+LKTI Sbjct: 248 TRNIFIECTGTDFTKAKIVLDIIVTMFSEHCENQFTVEAVEVVSPNGKSSTFPELPYRKEMVRADLINKKVGIRETPANLAKLLTRMCLKSEVIGDGN---QIEVEIPPTRADVIHACDIVEDAAIAYGYNNIQMTLPKTYTIANQFPLNKLTELLRLDMAAAGFTEALTFALCSQEDIADKLGLDISATKAVHISNPKTAEFQVARTTLLPGLLKTI 462
BLAST of CF833070 vs. ExPASy Swiss-Prot
Match: SYFB_CAEEL (Phenylalanyl-tRNA synthetase beta chain OS=Caenorhabditis elegans GN=frs-2 PE=2 SV=2) HSP 1 Score: 190.66 bits (483), Expect = 5.899e-48 Identity = 103/219 (47.03%), Postives = 148/219 (67.58%), Query Frame = 2 Query: 17 TKNVFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVYAD-GRSYVYPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVLVPPTRSDVLHPCDVMEDVAIAYGYNNIPKRKPAS---VKPLALNEFSDLMRLEIAMNGFTEVLTWILCSSKEISTMLNRQTDESTAV-VGNPRTSDFEVVRTTLMPGILKTI 658 TKNVFIE TATD KA +VL+T+VT+FS+YC + + +E VEVVY + G +YP LS M V+ IN IG++L+ EE+ +LLN+M L AE +A + + ++VPPTR D+LH CD+ EDV +A+GYNN+ + P S +N+ D +R+EIA G+TE L + LCS +IS+ L + S AV +GNP+T +F+V RT+L+PG+LKT+ Sbjct: 249 TKNVFIEATATDKQKAFVVLDTIVTLFSQYCAKPFTIEQVEVVYEETGVKELYPLLSYREMTVTTPEINTKIGINLKDEEMATLLNKMSLKAEVAA----KETLKIVVPPTRHDILHACDIAEDVGVAFGYNNLITKLPESNTVAVAFPINKLCDNLRIEIAAAGWTEALNFALCSRDDISSKLRQPDALSHAVHIGNPKTLEFQVARTSLLPGLLKTL 463
BLAST of CF833070 vs. ExPASy Swiss-Prot
Match: SYFB_DICDI (Phenylalanyl-tRNA synthetase beta chain OS=Dictyostelium discoideum GN=pheSB PE=3 SV=2) HSP 1 Score: 185.267 bits (469), Expect = 2.478e-46 Identity = 97/220 (44.09%), Postives = 148/220 (67.27%), Query Frame = 2 Query: 17 TKNVFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVYADGRSY-VYPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVLVPPTRSDVLHPCDVMEDVAIAYGYNNIPKRKP-----ASVKPLALNEFSDLMRLEIAMNGFTEVLTWILCSSKEISTMLNRQTDESTAVVGNPRTSDFEVVRTTLMPGILKTI 658 TKNVFIE TA D TKA IVLNTM+T+FSEYCK+ + +E VEV+ ADG+S +YP + + + YIN + G+++ ++ +LL RM L ++ S +++ +I V VP TRSD++H CD+MEDVAI YGY+N+ K P V+P +N+ S+L+ EIA+ GFTE++T++LC +++ T LN+ D S+ + N + +F VRT L+ +LK++ Sbjct: 251 TKNVFIEVTANDRTKANIVLNTMLTMFSEYCKQPFTMEQVEVIDADGKSTGLYPQIQEKQINAQVDYINKSAGINITPNDMVTLLKRMSLQSKLS---DDEKSIIVDVPVTRSDIMHACDIMEDVAIGYGYDNLKKEIPNCNTIGRVQP--INKLSELLANEIALAGFTEIMTFVLCQNRDNFTALNKADDGSSVKISNAVSEEFTEVRTNLVSTLLKSV 465
BLAST of CF833070 vs. ExPASy Swiss-Prot
Match: SYFB_YEAST (Phenylalanyl-tRNA synthetase beta chain OS=Saccharomyces cerevisiae GN=FRS1 PE=1 SV=3) HSP 1 Score: 178.333 bits (451), Expect = 3.029e-44 Identity = 95/221 (42.99%), Postives = 141/221 (63.80%), Query Frame = 2 Query: 17 TKNVFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVYA-DGRSYVYPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVLVPPTRSDVLHPCDVMEDVAIAYGYNNIPKRKPAS-----VKPLALNEFSDLMRLEIAMNGFTEVLTWILCSSKEISTMLNRQTDESTAV-VGNPRTSDFEVVRTTLMPGILKTI 658 T+N+ I+ TATD TKA+IVLN + T+FS YC + VEPVE+V +G+S + P+ + M+VS+ YIN +G+ A+E+ L +M LHA +S + ++V +P TR D+LH CD+MED A+ YG+NN+PK + S KPL +N+ SD+ R+ + + EVL LCS E L + + AV + NP+T +++VVRTTL+PGILKT+ Sbjct: 237 TRNILIDITATDKTKAEIVLNILTTMFSRYCDEPFTVEPVEIVSEHNGQSRLAPNFNDRIMDVSIKYINSCLGLDQSADEIAHCLKKMSLHAVQSKEDKD--ILHVDIPVTRPDILHACDIMEDAAVGYGFNNLPKGEKLSNANFIAKPLPINKVSDIFRVASSQATWVEVLPLTLCSHDENFKFLRQSDNGDLAVKLANPKTLEYQVVRTTLLPGILKTV 455
BLAST of CF833070 vs. ExPASy Swiss-Prot
Match: SYFB_SCHPO (Phenylalanyl-tRNA synthetase beta chain OS=Schizosaccharomyces pombe GN=SPAC23A1.12c PE=2 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 6.749e-44 Identity = 95/220 (43.18%), Postives = 146/220 (66.36%), Query Frame = 2 Query: 17 TKNVFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVYA-DGRSYVYPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVLVPPTRSDVLHPCDVMEDVAIAYGYNNIPKRKPASV----KPLALNEFSDLMRLEIAMNGFTEVLTWILCSSKEISTMLNRQTDESTAV-VGNPRTSDFEVVRTTLMPGILKTI 658 T+++FI+ TATD TK +IV+N M T+FS YC+ + +EPV ++ +G + V P+L+ + + Y+N G+SL +E+ LL RM L A+ + N+ + V VPP R+D+LH CD+MED+ IAYGY+N+ PA KP +N +D++R E+A G++EV+ +ILCS E L R+TD+S AV + NP+T +F+VVR++L+PGILKT+ Sbjct: 235 TRDIFIDVTATDKTKLEIVVNMMTTMFSCYCEEPFTIEPVNIISEHNGCTRVTPNLNPTCFKADIDYLNEACGLSLPEDEICHLLTRMMLTAKPNP--NDSKTLLVYVPPLRADILHQCDIMEDLGIAYGYDNLKHTYPAHSVTFGKPFEVNRLADIIRNEVAYAGWSEVMPFILCSHDENYAWL-RKTDDSKAVQLANPKTLEFQVVRSSLLPGILKTV 451
BLAST of CF833070 vs. ExPASy Swiss-Prot
Match: SYFB_CANAL (Phenylalanyl-tRNA synthetase beta chain OS=Candida albicans GN=FRS1 PE=2 SV=3) HSP 1 Score: 176.022 bits (445), Expect = 1.504e-43 Identity = 91/220 (41.36%), Postives = 143/220 (65.00%), Query Frame = 2 Query: 17 TKNVFIECTATDLTKAKIVLNTMVTIFSEYCKRKYQVEPVEVVYA-DGRSYVYPDLSAYNMEVSLSYINHTIGVSLEAEEVTSLLNRMQLHAERSASGNNQWNINVLVPPTRSDVLHPCDVMEDVAIAYGYNNIPKRKPAS----VKPLALNEFSDLMRLEIAMNGFTEVLTWILCSSKEISTMLNRQTDESTAV-VGNPRTSDFEVVRTTLMPGILKTI 658 TKNV+I+ T TD TK +IV+N +V +FS YCK +++EPV+++ + + V P+++ + +SYIN +G++ EE++ LL +M L A S + ++V +P TRSD+LH CD+MEDVAI YGY+N+ K KP + PL +N+ +D++RL + G+ EV+ L S E L ++ D + AV + NP+T +++VVRTTL+PGILKT+ Sbjct: 236 TKNVWIDVTGTDRTKTEIVINQLVAMFSRYCKEPFEIEPVQIISEHNNETRVCPNITPRTAKAEISYINSCVGLNYSGEEISKLLKKMSLDATPSTEERDI--LDVKIPITRSDILHQCDIMEDVAIGYGYDNLKKTKPQAESLVAAPLPVNKVADILRLASSQAGYLEVMPLTLSSHDENFAWLKQKDDGTKAVKLENPKTIEYQVVRTTLLPGILKTV 453 The following BLAST results are available for this feature:
BLAST of CF833070 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF833070 ID=CF833070; Name=CF833070; organism=Citrus sinensis; type=EST; length=661bpback to top |