CF833083

Overview
NameCF833083
Unique NameCF833083
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length784
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF833083 vs. ExPASy Swiss-Prot
Match: QKIL5_ARATH (KH domain-containing protein At1g09660 OS=Arabidopsis thaliana GN=At1g09660 PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 7.660e-51
Identity = 95/116 (81.90%), Postives = 107/116 (92.24%), Query Frame = -3 
Query:  435 KYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGTLREE 782
            KYP++NFVGRILGPRGNSLKRVE  T CRVFIRGRGSVKD++KEEKLK KPGYEHL EPLHVL+EAE PEDIINSRL+HAV  LE+LLKP+DES+DHYK++QL+ELA LNGTLREE
Sbjct:  157 KYPSYNFVGRILGPRGNSLKRVELATHCRVFIRGRGSVKDTVKEEKLKGKPGYEHLCEPLHVLIEAELPEDIINSRLEHAVHFLESLLKPMDESMDHYKREQLKELAALNGTLREE 272
[Close]
BLAST of CF833083 vs. ExPASy Swiss-Prot
Match: QKIL2_ARATH (KH domain-containing protein At5g56140 OS=Arabidopsis thaliana GN=At5g56140 PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.952e-46
Identity = 94/140 (67.14%), Postives = 112/140 (80.00%), Query Frame = -3 
Query:  360 YPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGTLREEXXXXXXXXXXXXXPFNNAGMKRAKT 779
            YPNFNFVGR+LGPRGNSLKRVEA T+CRV IRGRGS+KD IKEE ++ KPGYEHLNEPLH+LVEAE P +I+++RL  A  IL++LL P++E+ D YKKQQLRELA+LNGTLREE             P+N+ GMKRAKT
Sbjct:  177 YPNFNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPIKEEMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPMEETHDMYKKQQLRELALLNGTLREE----GSPMSGSVSPYNSLGMKRAKT 312
[Close]
BLAST of CF833083 vs. ExPASy Swiss-Prot
Match: QKIL1_ARATH (KH domain-containing protein At4g26475 OS=Arabidopsis thaliana GN=At4g26475 PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.550e-46
Identity = 93/141 (65.96%), Postives = 113/141 (80.14%), Query Frame = -3 
Query:  360 KYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGTLREEXXXXXXXXXXXXXPFNNAGMKRAKT 782
            KYPN+NFVGR+LGPRGNSLKRVEA T+CRV IRGRGS+KD IKE+ ++ KPGYEHLNEPLH+LVEAE P +I+++RL  A  IL++LL PV+E+ D YKKQQLRELA+LNG+LREE             P+N+ GMKRAKT
Sbjct:  170 KYPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPIKEDMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPVEETHDFYKKQQLRELALLNGSLREE----GSPMSGSISPYNSLGMKRAKT 306
[Close]
BLAST of CF833083 vs. ExPASy Swiss-Prot
Match: QKIL4_ARATH (KH domain-containing protein At3g08620 OS=Arabidopsis thaliana GN=At3g08620 PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.117e-44
Identity = 91/142 (64.08%), Postives = 107/142 (75.35%), Query Frame = -3 
Query:  354 YPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGTLREEXXXXXXXXXXXXXPFNNAGMKRAKTGR 779
            YPNFNFVGR+LGPRGNSLKRVEA T CRV+IRG+GS+KD  KEEKLK KPGYEHLNE LH+L+EA+ P DI++ +L  A  I+E L+KPVDES D+ K+QQLRELA+LN  LRE              PFN+  MKR KTGR
Sbjct:  146 YPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEELVKPVDESQDYIKRQQLRELALLNSNLREN----SPGPSGSVSPFNSNAMKRPKTGR 283
[Close]
BLAST of CF833083 vs. ExPASy Swiss-Prot
Match: QKIL3_ARATH (KH domain-containing protein At2g38610 OS=Arabidopsis thaliana GN=At2g38610 PE=1 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 5.502e-41
Identity = 90/142 (63.38%), Postives = 105/142 (73.94%), Query Frame = -3 
Query:  357 YPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLN-GTLREEXXXXXXXXXXXXXPFNNAGMKRAKTG 779
            YPNFNFVGR+LGPRGNSLKRVEA T CRVFIRG+GS+KD  KE+KL+ +PGYEHLNE LH+L+EA+ P  I+  RL  A  I+E LLKPVDES D  K+QQLRELA+LN   LREE             PFN++G KR KTG
Sbjct:  147 YPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRGKGSIKDPEKEDKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEELLKPVDESQDFIKRQQLRELALLNSNNLREE--SPGPSGGGSVSPFNSSG-KRPKTG 285
[Close]
BLAST of CF833083 vs. ExPASy Swiss-Prot
Match: QKI_RAT (Protein quaking OS=Rattus norvegicus GN=Qki PE=1 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 5.906e-27
Identity = 59/115 (51.30%), Postives = 81/115 (70.43%), Query Frame = -3 
Query:  438 KYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGTLRE 782
            +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D  KEE+ + KP +EHLNE LHVL+  E  ++    +L  AV  ++ LL P  E  D  KK QL ELA+LNGT R+
Sbjct:   92 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRD 206
[Close]
BLAST of CF833083 vs. ExPASy Swiss-Prot
Match: QKI_PIG (Protein quaking OS=Sus scrofa GN=QKI PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.906e-27
Identity = 59/115 (51.30%), Postives = 81/115 (70.43%), Query Frame = -3 
Query:  438 KYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGTLRE 782
            +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D  KEE+ + KP +EHLNE LHVL+  E  ++    +L  AV  ++ LL P  E  D  KK QL ELA+LNGT R+
Sbjct:   92 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRD 206
[Close]
BLAST of CF833083 vs. ExPASy Swiss-Prot
Match: QKI_MOUSE (Protein quaking OS=Mus musculus GN=Qki PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.906e-27
Identity = 59/115 (51.30%), Postives = 81/115 (70.43%), Query Frame = -3 
Query:  438 KYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGTLRE 782
            +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D  KEE+ + KP +EHLNE LHVL+  E  ++    +L  AV  ++ LL P  E  D  KK QL ELA+LNGT R+
Sbjct:   92 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRD 206
[Close]
BLAST of CF833083 vs. ExPASy Swiss-Prot
Match: QKI_HUMAN (Protein quaking OS=Homo sapiens GN=QKI PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.906e-27
Identity = 59/115 (51.30%), Postives = 81/115 (70.43%), Query Frame = -3 
Query:  438 KYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGTLRE 782
            +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D  KEE+ + KP +EHLNE LHVL+  E  ++    +L  AV  ++ LL P  E  D  KK QL ELA+LNGT R+
Sbjct:   92 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRD 206
[Close]
BLAST of CF833083 vs. ExPASy Swiss-Prot
Match: QKI_HORSE (Protein quaking OS=Equus caballus GN=QKI PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.906e-27
Identity = 59/115 (51.30%), Postives = 81/115 (70.43%), Query Frame = -3 
Query:  438 KYPNFNFVGRILGPRGNSLKRVEAMTECRVFIRGRGSVKDSIKEEKLKDKPGYEHLNEPLHVLVEAEFPEDIINSRLDHAVAILENLLKPVDESLDHYKKQQLRELAMLNGTLRE 782
            +YP+FNFVGRILGPRG + K++EA T C++ +RG+GS++D  KEE+ + KP +EHLNE LHVL+  E  ++    +L  AV  ++ LL P  E  D  KK QL ELA+LNGT R+
Sbjct:   92 EYPDFNFVGRILGPRGLTAKQLEAETGCKIMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVKKLLVPAAEGEDSLKKMQLMELAILNGTYRD 206
The following BLAST results are available for this feature:
BLAST of CF833083 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
QKIL5_ARATH7.660e-5181.90KH domain-containing protein At1g09660 OS=Arabidop... [more]
QKIL2_ARATH1.952e-4667.14KH domain-containing protein At5g56140 OS=Arabidop... [more]
QKIL1_ARATH2.550e-4665.96KH domain-containing protein At4g26475 OS=Arabidop... [more]
QKIL4_ARATH3.117e-4464.08KH domain-containing protein At3g08620 OS=Arabidop... [more]
QKIL3_ARATH5.502e-4163.38KH domain-containing protein At2g38610 OS=Arabidop... [more]
QKI_RAT5.906e-2751.30Protein quaking OS=Rattus norvegicus GN=Qki PE=1 S... [more]
QKI_PIG5.906e-2751.30Protein quaking OS=Sus scrofa GN=QKI PE=2 SV=1[more]
QKI_MOUSE5.906e-2751.30Protein quaking OS=Mus musculus GN=Qki PE=1 SV=1[more]
QKI_HUMAN5.906e-2751.30Protein quaking OS=Homo sapiens GN=QKI PE=1 SV=1[more]
QKI_HORSE5.906e-2751.30Protein quaking OS=Equus caballus GN=QKI PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_03A01_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa03A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833083 ID=CF833083; Name=CF833083; organism=Citrus sinensis; type=EST; length=784bp
TTTTTTTTTTTTTTTTTAAAAATTAATTAGGGGAATCGAGTTTTTTTTAA
TCCATATAAGTAACAAATCTCGATACTCAAGCAGGAATAATACACCAAAG
AAATCATGGATTGCTGACAAACATGTTTAGCTATATAAAACACAAACAGT
GGGAAGCAGATACCCGGTCTGAGATGCCAACAGTTGAGCGCAAAACTAAC
TCAGGATTTCGACCAACTGTTCTCGAATCAAGTCCCTCCCCAAGGTTCTG
AAAAACAAAACCAATGAAGATTGTCAGGACAGCAATCCATCAGCTGCAGT
GATCCAGGGGTTCATCGATGGTCCATTTCATCATTGATATGTATAACATG
TTATCTTCCGGTCTTGGCGCGTTTCATTCCAGCATTGTTAAAGGGCGACA
TACTAGGACTCATACTCGGACTCATGCTTGGGCTTTCTTCTCTTAAAGTA
CCGTTCAGCATAGCTAATTCCCGCAGTTGTTGCTTCTTGTAATGATCCAA
GGATTCATCCACGGGCTTCAAAAGGTTCTCTAGTATTGCTACAGCATGAT
CCAAGCGGGAATTTATTATATCCTCTGGAAATTCGGCCTCCACTAACACG
TGCAGTGGCTCATTAAGATGCTCATATCCAGGTTTATCTTTAAGTTTTTC
TTCCTTTATCGAATCCTTGACTGAACCCCGGCCTCTAATGAACACCCTAC
ATTCTGTCATGGCTTCGACTCTTTTGAGCGAGTTCCCACGCGGTCCCAAA
ATCCGGCCGACAAAATTAAAATTTGGATATTTAT
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