CF833096
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF833096 vs. ExPASy Swiss-Prot
Match: SNAK2_SOLTU (Snakin-2 OS=Solanum tuberosum GN=SN2 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 2.268e-23 Identity = 44/62 (70.97%), Postives = 47/62 (75.81%), Query Frame = -1 Query: 155 IDCGGLCKQRCSLHSRPNLCNRACGTCCVRCKCVPPGTAGNRELCGSCYTDMTTHGNRTKCP 340 IDCGG C RC L SRP LCNRACGTCC RC CVPPGT+GN E C CY +TTHGN+ KCP Sbjct: 44 IDCGGACAARCRLSSRPRLCNRACGTCCARCNCVPPGTSGNTETC-PCYASLTTHGNKRKCP 104
BLAST of CF833096 vs. ExPASy Swiss-Prot
Match: GASA3_ARATH (Gibberellin-regulated protein 3 OS=Arabidopsis thaliana GN=GASA3 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.245e-21 Identity = 48/81 (59.26%), Postives = 51/81 (62.96%), Query Frame = -1 Query: 155 HAGVGQLVVRGVTRRLMQDIDCGGLCKQRCSLHSRPNLCNRACGTCCVRCKCVPPGTAGNRELCGSCYTDMTTHGNRTKCP 397 HA V GV + IDCGG CK RCS SRPNLC RAC +CC RC CVPPGTAGN LC CY +TT G R KCP Sbjct: 25 HAAEDSQVGEGVVK-----IDCGGRCKGRCSKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLC-PCYASITTRGGRLKCP 99
BLAST of CF833096 vs. ExPASy Swiss-Prot
Match: GASA2_ARATH (Gibberellin-regulated protein 2 OS=Arabidopsis thaliana GN=GASA2 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 3.621e-21 Identity = 47/81 (58.02%), Postives = 51/81 (62.96%), Query Frame = -1 Query: 155 HAGVGQLVVRGVTRRLMQDIDCGGLCKQRCSLHSRPNLCNRACGTCCVRCKCVPPGTAGNRELCGSCYTDMTTHGNRTKCP 397 HA G V GV + IDCGG CK RCS SR LC RAC +CC RC CVPPGT+GN LC CY +TTHG R KCP Sbjct: 25 HAADGAKVGEGVVK-----IDCGGRCKDRCSKSSRTKLCLRACNSCCSRCNCVPPGTSGNTHLC-PCYASITTHGGRLKCP 99
BLAST of CF833096 vs. ExPASy Swiss-Prot
Match: GASA1_ARATH (Gibberellin-regulated protein 1 OS=Arabidopsis thaliana GN=GASA1 PE=1 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 4.004e-20 Identity = 40/62 (64.52%), Postives = 43/62 (69.35%), Query Frame = -1 Query: 155 IDCGGLCKQRCSLHSRPNLCNRACGTCCVRCKCVPPGTAGNRELCGSCYTDMTTHGNRTKCP 340 IDCG C RC L RP LC+RACGTCC RC CVPPGT GN + C CY +TTHG R KCP Sbjct: 38 IDCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKC-QCYASLTTHGGRRKCP 98 The following BLAST results are available for this feature:
BLAST of CF833096 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF833096 ID=CF833096; Name=CF833096; organism=Citrus sinensis; type=EST; length=514bpback to top |