CF833097
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF833097 vs. ExPASy Swiss-Prot
Match: SNAK2_SOLTU (Snakin-2 OS=Solanum tuberosum GN=SN2 PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 4.570e-24 Identity = 52/116 (44.83%), Postives = 65/116 (56.03%), Query Frame = 3 Query: 12 MAVRVLLLSGILLFCVAVAEVSSTLKKEDDRDGVQHAGVGQLVVRGVTRRLMQDIDCGGLCKQRCSLHSRPNLCNRACGTCCVRCKCVPPGTAGNRELCGSCYTDMTTHGNRTKCP 359 MA+ L + +LL + + +V S + + + A + IDCGG C RC L SRP LCNRACGTCC RC CVPPGT+GN E C CY +TTHGN+ KCP Sbjct: 1 MAISKALFASLLLSLLLLEQVQSIQTDQVTSNAISEAAYSY-----------KKIDCGGACAARCRLSSRPRLCNRACGTCCARCNCVPPGTSGNTETC-PCYASLTTHGNKRKCP 104
BLAST of CF833097 vs. ExPASy Swiss-Prot
Match: GASA3_ARATH (Gibberellin-regulated protein 3 OS=Arabidopsis thaliana GN=GASA3 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 5.587e-22 Identity = 54/113 (47.79%), Postives = 62/113 (54.87%), Query Frame = 3 Query: 21 RVLLLSGILLFCVAVAEVSSTLKKEDDRDGVQHAGVGQLVVRGVTRRLMQDIDCGGLCKQRCSLHSRPNLCNRACGTCCVRCKCVPPGTAGNRELCGSCYTDMTTHGNRTKCP 359 R L+ ++LFC+ E+ HA V GV + IDCGG CK RCS SRPNLC RAC +CC RC CVPPGTAGN LC CY +TT G R KCP Sbjct: 5 RSTLVLLLILFCLTTFELHV------------HAAEDSQVGEGVVK-----IDCGGRCKGRCSKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLC-PCYASITTRGGRLKCP 99
BLAST of CF833097 vs. ExPASy Swiss-Prot
Match: GASA2_ARATH (Gibberellin-regulated protein 2 OS=Arabidopsis thaliana GN=GASA2 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 3.621e-21 Identity = 47/81 (58.02%), Postives = 51/81 (62.96%), Query Frame = 3 Query: 117 HAGVGQLVVRGVTRRLMQDIDCGGLCKQRCSLHSRPNLCNRACGTCCVRCKCVPPGTAGNRELCGSCYTDMTTHGNRTKCP 359 HA G V GV + IDCGG CK RCS SR LC RAC +CC RC CVPPGT+GN LC CY +TTHG R KCP Sbjct: 25 HAADGAKVGEGVVK-----IDCGGRCKDRCSKSSRTKLCLRACNSCCSRCNCVPPGTSGNTHLC-PCYASITTHGGRLKCP 99
BLAST of CF833097 vs. ExPASy Swiss-Prot
Match: GASA1_ARATH (Gibberellin-regulated protein 1 OS=Arabidopsis thaliana GN=GASA1 PE=1 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 2.347e-20 Identity = 46/116 (39.66%), Postives = 62/116 (53.45%), Query Frame = 3 Query: 12 MAVRVLLLSGILLFCVAVAEVSSTLKKEDDRDGVQHAGVGQLVVRGVTRRLMQDIDCGGLCKQRCSLHSRPNLCNRACGTCCVRCKCVPPGTAGNRELCGSCYTDMTTHGNRTKCP 359 MA+ L++ +L+ + + V + ++ ++G + IDCG C RC L RP LC+RACGTCC RC CVPPGT GN + C CY +TTHG R KCP Sbjct: 1 MAISKALIASLLISLLVLQLVQADVENSQKKNGYA-----------------KKIDCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKC-QCYASLTTHGGRRKCP 98 The following BLAST results are available for this feature:
BLAST of CF833097 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF833097 ID=CF833097; Name=CF833097; organism=Citrus sinensis; type=EST; length=515bpback to top |