CF833117

Overview
NameCF833117
Unique NameCF833117
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length891
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF833117 vs. ExPASy Swiss-Prot
Match: SPAG1_HUMAN (Sperm-associated antigen 1 OS=Homo sapiens GN=SPAG1 PE=1 SV=3)

HSP 1 Score: 73.559 bits (179), Expect = 1.746e-12
Identity = 40/120 (33.33%), Postives = 77/120 (64.17%), Query Frame = -3
Query:  221 KNKGVDNQKAGQYADAIKWLSWAVILLEKSG-DMATMMEVL-STRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLTKMV 574
            K++G +  ++GQ+A+A    S A+ LLE +G ++A  + +L S RA+CY + G     + DC++ LE    ++  L++RA+ YE++E+Y     D +TVL+ID   ++A  +++RL++++
Sbjct:  449 KSQGNELFRSGQFAEAAGKYSAAIALLEPAGSEIADDLSILYSNRAACYLKEGNCSGCIQDCNRALELHPFSMKPLLRRAMAYETLEQYGKAYVDYKTVLQIDCGLQLANDSVNRLSRIL 568          
BLAST of CF833117 vs. ExPASy Swiss-Prot
Match: SPAG1_RAT (Sperm-associated antigen 1 OS=Rattus norvegicus GN=Spag1 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.280e-12
Identity = 41/120 (34.17%), Postives = 73/120 (60.83%), Query Frame = -3
Query:  221 KNKGVDNQKAGQYADAIKWLSWAVILLEKSG-DMATMMEVL-STRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLTKMV 574
            K++G +  + GQ+A+A    S A+  LE +G + A  + +L S RA+CY + G  +  + DC + LE     V  L++RA+ YE++E+Y+    D  TVLKID   ++A  +++R+T+++
Sbjct:  433 KSRGNELFRGGQFAEAAVQYSGAIAQLEPTGSENADELSILYSNRAACYLKEGNCRGCIQDCDRALELQPFAVKPLLRRAMAYETLEQYRSAYVDYITVLKIDCRIQLASDSVNRITRIL 552          
BLAST of CF833117 vs. ExPASy Swiss-Prot
Match: SPAG1_MOUSE (Sperm-associated antigen 1 OS=Mus musculus GN=Spag1 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.132e-11
Identity = 39/120 (32.50%), Postives = 72/120 (60.00%), Query Frame = -3
Query:  221 KNKGVDNQKAGQYADAIKWLSWAVILLEKSGDM-ATMMEVL-STRASCYKEVGEYKKAVADCSKVLEQDDTNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTIHRLTKMV 574
            K +G +  + GQ+A+A    S A+  LE +G   A  + +L S RA+CY + G  +  + DC++ LE    +V  L++RA+ YE++E+Y+    D +TVL+ID   ++A  + +R+ +++
Sbjct:  434 KRRGNELFRGGQFAEAAAQYSVAIAQLEPTGSANADELSILYSNRAACYLKEGNCRDCIQDCNRALELHPFSVKPLLRRAMAYETLEQYRNAYVDYKTVLQIDCGIQLASDSANRIARIL 553          
The following BLAST results are available for this feature:
BLAST of CF833117 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
SPAG1_HUMAN1.746e-1233.33Sperm-associated antigen 1 OS=Homo sapiens GN=SPAG... [more]
SPAG1_RAT2.280e-1234.17Sperm-associated antigen 1 OS=Rattus norvegicus GN... [more]
SPAG1_MOUSE1.132e-1132.50Sperm-associated antigen 1 OS=Mus musculus GN=Spag... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_03A21_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa03A21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833117 ID=CF833117; Name=CF833117; organism=Citrus sinensis; type=EST; length=891bp
TTTTTTGGAAAGGAAAATAATTTCCATCGGCAAACAAAAGAAGATCTCAC
CTTTTTGTACCAGTAAAATTTTTCAACAGGCAACAATATCACACGAATTC
CATGTTTCCAGGAAAAGTGCTATAATTCCCCATGATTTCTTAAGAGTACA
GTGGGAAAAATGTATAAAGCTAAAATGATGCTAATATAAATAGAAAACGA
TCCCGATAACCTCTCTAGTCAACCATTTTAGTCAGCCGGTGGATGGTACT
TCTTGCAATCCTGTTACTGGGATCAATCTTCAGAACAGTCCTCAGGTCCT
CAGCTCCAAGTTTATACTTTTCCATGCTTTCATACAGGAGTGCACGCTGT
ACAAGGACAGATACATTTGTATCATCTTGTTCCAACACCTTTGAACAGTC
AGCCACAGCTTTCTTATACTCCCCAACTTCTTTATAACATGAAGCTCTGG
TTGATAAAACCTCCATCATGGTAGCCATATCACCTGATTTCTCCAGAAGA
ATCACAGCCCAAGACAGCCACTTAATAGCATCAGCATATTGGCCCGCCTT
TTGATTATCTACACCCTTGTTCTTAGCAGCAGCACCAGTAACCCCAGCGG
GAGGAGGAGGCAGCCCTTCAAGCTCAGTGGTAGTACCCCCATCATCGGTT
CCTCCACCAAAATCAGAATAACCCCAATCATCCACTTCTGAAAACGGCTG
CCCTCCACCAGAAGCAGTAGCACCAACTCCGGCTGAGGCTGAAGACGATG
AAAAGAACATGCCAAGTGGATCACCACCAGTACTTTGACTTTGACTTGAG
GGCTTATTCCGAGTGCTGTGGTCCATAGCAGGCATACCAAAATCACCCAT
ATTCGATCCCATAAAATCATTATCACTTGAAAGAAAACCAC
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