CF833127
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF833127 vs. ExPASy Swiss-Prot
Match: RL5_CUCSA (60S ribosomal protein L5 OS=Cucumis sativus GN=RPL5 PE=2 SV=1) HSP 1 Score: 343.584 bits (880), Expect = 7.821e-94 Identity = 171/208 (82.21%), Postives = 186/208 (89.42%), Query Frame = -2 Query: 188 LPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVPRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQXXXXXXXXXXXKRYNLKKLTYEERKARLVERLKALNAA 811 LP+YGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEP + RRPFRALLDVGL++TTTGNRVFGALKG+LDGGLDIPHS+KRFAG++K+ +QLD EV RKYI+GGHVAAYMRTLMEDEPEKYQSHF EYIK+GIEAD LE LYKKVHAAIRA+P KRYNLKKLTY+ERKARLVERL ALN+A Sbjct: 83 LPQYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGYAKNGQQLDVEVHRKYIFGGHVAAYMRTLMEDEPEKYQSHFSEYIKKGIEADELEGLYKKVHAAIRANPIAKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALNSA 290
BLAST of CF833127 vs. ExPASy Swiss-Prot
Match: RL51_ARATH (60S ribosomal protein L5-1 OS=Arabidopsis thaliana GN=ATL5 PE=2 SV=2) HSP 1 Score: 330.102 bits (845), Expect = 8.949e-90 Identity = 161/208 (77.40%), Postives = 183/208 (87.98%), Query Frame = -2 Query: 188 LPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVPRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQXXXXXXXXXXXKRYNLKKLTYEERKARLVERLKALNAA 811 LP+YGL VGLTNYAAAYCTGLLLARRVLKMLEMD EYEGNVEATGED+SVEPT++RRPFRALLDVGL++TTTGNRVFGALKG+LDGGLDIPHS+KRFAGF K++KQLDAE+ R YIYGGHV+ YM+ L EDEPEK Q+HF YIK+G+EA+++EELYKKVHAAIRADPN KRYNLKKLTYEERK +L+ER+KALN A Sbjct: 83 LPQYGLTVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEAESIEELYKKVHAAIRADPNPKKTVKPAPKQHKRYNLKKLTYEERKNKLIERVKALNGA 290
BLAST of CF833127 vs. ExPASy Swiss-Prot
Match: RL52_ARATH (60S ribosomal protein L5-2 OS=Arabidopsis thaliana GN=RPL5B PE=2 SV=3) HSP 1 Score: 328.176 bits (840), Expect = 3.400e-89 Identity = 159/208 (76.44%), Postives = 183/208 (87.98%), Query Frame = -2 Query: 188 LPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVPRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQXXXXXXXXXXXKRYNLKKLTYEERKARLVERLKALNAA 811 LP+YGL VGLTNYAAAYCTGLLLARRVLKMLEMD EYEGNVEATGED+SVEPT++RRPFRALLDVGL++TTTGNRVFGALKG+LDGGLDIPHS+KRFAGF K++KQLDAE+ R YIYGGHV+ YM+ L EDEPEK Q+HF YIK+G+EA+++EE+YKKVHAAIRA+PN KRYNLKKLTYEERK +L+ER+KALN A Sbjct: 83 LPQYGLTVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEAESIEEMYKKVHAAIRAEPNHKKTEKSAPKEHKRYNLKKLTYEERKNKLIERVKALNGA 290
BLAST of CF833127 vs. ExPASy Swiss-Prot
Match: RL51_ORYSJ (60S ribosomal protein L5-1 OS=Oryza sativa subsp. japonica GN=RPL5A PE=2 SV=1) HSP 1 Score: 324.324 bits (830), Expect = 4.910e-88 Identity = 156/208 (75.00%), Postives = 179/208 (86.06%), Query Frame = -2 Query: 188 LPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVPRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQXXXXXXXXXXXKRYNLKKLTYEERKARLVERLKALNAA 811 LPRYGLEVGLTNYAAAYCTGLLLARRVLK+ +D EYEGN+EATGEDY VEP + RRPFRALLDVGL++TTTGNRVFGALKG+LDGGLDIPHS+KRFAGF KD KQLD+++ RKYIYGGHVA YMR++ E+EPEK+Q+HF EY+K+GI+AD +E LYKKVHAAIRADP KRYNLKKLTYE+RKA LVERL ALN++ Sbjct: 84 LPRYGLEVGLTNYAAAYCTGLLLARRVLKLRGLDQEYEGNIEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKKGIDADGMEALYKKVHAAIRADPTMAKSTKKEPATHKRYNLKKLTYEQRKASLVERLNALNSS 291
BLAST of CF833127 vs. ExPASy Swiss-Prot
Match: RL51_ORYSI (60S ribosomal protein L5-1 OS=Oryza sativa subsp. indica GN=RPL5A PE=2 SV=2) HSP 1 Score: 324.324 bits (830), Expect = 4.910e-88 Identity = 156/208 (75.00%), Postives = 179/208 (86.06%), Query Frame = -2 Query: 188 LPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVPRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQXXXXXXXXXXXKRYNLKKLTYEERKARLVERLKALNAA 811 LPRYGLEVGLTNYAAAYCTGLLLARRVLK+ +D EYEGN+EATGEDY VEP + RRPFRALLDVGL++TTTGNRVFGALKG+LDGGLDIPHS+KRFAGF KD KQLD+++ RKYIYGGHVA YMR++ E+EPEK+Q+HF EY+K+GI+AD +E LYKKVHAAIRADP KRYNLKKLTYE+RKA LVERL ALN++ Sbjct: 84 LPRYGLEVGLTNYAAAYCTGLLLARRVLKLRGLDQEYEGNIEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKKGIDADGMEALYKKVHAAIRADPTMAKSTKKEPATHKRYNLKKLTYEQRKASLVERLNALNSS 291
BLAST of CF833127 vs. ExPASy Swiss-Prot
Match: RL52_ORYSJ (60S ribosomal protein L5-2 OS=Oryza sativa subsp. japonica GN=RPL5B PE=3 SV=1) HSP 1 Score: 322.783 bits (826), Expect = 1.429e-87 Identity = 156/208 (75.00%), Postives = 178/208 (85.58%), Query Frame = -2 Query: 188 LPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVPRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQXXXXXXXXXXXKRYNLKKLTYEERKARLVERLKALNAA 811 LPRYGLEVGLTNYAAAYCTGLLLARRVL + +D EYEGNVEATGEDY VEP + RRPFRALLDVGL++TTTGNRVFGALKG+LDGGLDIPHS+KRFAGF KD KQLD+++ RKYIYGGHVA YMR++ E+EPEK+Q+HF EY+K+GI+AD +E LYKKVHAAIRADP KRYNLKKLTYE+RKA LVERL ALN++ Sbjct: 84 LPRYGLEVGLTNYAAAYCTGLLLARRVLTLRGLDQEYEGNVEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKKGIDADGMESLYKKVHAAIRADPTMAKSTKKEPATHKRYNLKKLTYEQRKASLVERLNALNSS 291
BLAST of CF833127 vs. ExPASy Swiss-Prot
Match: RL5_LYSTE (60S ribosomal protein L5 OS=Lysiphlebus testaceipes GN=RpL5 PE=2 SV=1) HSP 1 Score: 226.098 bits (575), Expect = 1.820e-58 Identity = 112/205 (54.63%), Postives = 150/205 (73.17%), Query Frame = -2 Query: 200 LPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRR-PFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVPRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQXXXXXXXXXXXKRYNLKKLTYEERKARLVERLKA 811 LP+YG++VGLTNYAAAYCTGLLLARR+LK L++D Y G E G++Y+VE ++ FR LD GL++TTTG R+FGA+KG++DGGL+IPHS KRF G+ +SK +A+V R++I+ H+A YM+TL E+EPE +Q F +YIK GI AD +EE+YKK H AIRADP++ KR+N KLT ERK R V+++KA Sbjct: 83 LPKYGIKVGLTNYAAAYCTGLLLARRLLKQLKLDTLYTGTTEVDGDEYNVEEHDDGPGAFRCYLDTGLMRTTTGARIFGAMKGAVDGGLNIPHSTKRFPGYDNESKSFNADVHRQHIFAHHIANYMKTLEENEPENFQRQFSQYIKNGITADGIEEMYKKAHEAIRADPDRAEIVKTKEPVKKRWNRAKLTLSERKDR-VKQIKA 286
BLAST of CF833127 vs. ExPASy Swiss-Prot
Match: RL5_SUBDO (60S ribosomal protein L5 OS=Suberites domuncula GN=RPL5 PE=2 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.703e-56 Identity = 105/205 (51.22%), Postives = 149/205 (72.68%), Query Frame = -2 Query: 200 LPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPT-ENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVPRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQXXXXXXXXXXXKRYNLKKLTYEERKARLVERLKA 811 LPRYG++VGLTNYAAAYCTGLLLARR+L L + +Y G + GED++VE + RPFRA LDVGL +TTTGNRVF A+KG++DGG+DIPHS RF G+ ++S QL+A+ R+YI+GGHV+ YM+ L E++ EKY++HF +IK GI AD++E++Y+ HA IRA+P KR+N K++ ++++ R+ ++ A Sbjct: 83 LPRYGVKVGLTNYAAAYCTGLLLARRLLTNLGLADKYAGQTDIDGEDFNVEHMGDGPRPFRAFLDVGLTRTTTGNRVFAAMKGAVDGGIDIPHSPSRFVGYDEESSQLEADKLRQYIFGGHVSDYMKYLQEEDEEKYKAHFSRFIKEGITADSMEQMYRDAHAKIRANPAHEKKQPRDGLVKKRWNRAKMSLKQKRDRVKQKKAA 287
BLAST of CF833127 vs. ExPASy Swiss-Prot
Match: RL5_DROME (60S ribosomal protein L5 OS=Drosophila melanogaster GN=RpL5 PE=1 SV=2) HSP 1 Score: 219.164 bits (557), Expect = 2.225e-56 Identity = 110/200 (55.00%), Postives = 147/200 (73.50%), Query Frame = -2 Query: 218 LPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRR-PFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVPRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADP-NQXXXXXXXXXXXKRYNLKKLTYEERKARL 811 LP+YG++VGLTNYAAAYCTGLL+ARRVL L +D+ Y G E TGE+++VEP ++ FR LDVGL +TTTG RVFGA+KG++DGGL+IPHS KRF G+S ++K +A+V R +I+G HVA YMR+L E++ E ++ F YIK GI AD+LE++YKK H AIR DP ++ KR+N KKLT E+RK ++ Sbjct: 83 LPKYGIQVGLTNYAAAYCTGLLVARRVLNKLGLDSLYAGCTEVTGEEFNVEPVDDGPGAFRCFLDVGLARTTTGARVFGAMKGAVDGGLNIPHSVKRFPGYSAETKSFNADVHRAHIFGQHVADYMRSLEEEDEESFKRQFSRYIKLGIRADDLEDIYKKAHQAIRNDPTHKVTAKKSSAVTKKRWNAKKLTNEQRKTKI 282
BLAST of CF833127 vs. ExPASy Swiss-Prot
Match: RL5_AEDAE (60S ribosomal protein L5 OS=Aedes aegypti GN=RpL5 PE=2 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.442e-55 Identity = 109/201 (54.23%), Postives = 144/201 (71.64%), Query Frame = -2 Query: 212 LPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRR-PFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVPRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRADPNQXXXXXXXXXXXKRYNLKKLTYEERKARLVE 811 LPRYG++VGLTNYAAAYCTGLL+ARR+L+ L +D Y G + TGE+Y VEP ++ FR LDVGL +TTTG R+FGA+KG++DGGL+IPHS KRF G+S ++K +AEV R +I+G HVA YMRTL E++ + Y+ F +YI GI+AD++E +YK HA IR DP KR+NL KLT E RKA++ + Sbjct: 83 LPRYGVKVGLTNYAAAYCTGLLVARRILQKLRLDTLYTGCTDVTGEEYLVEPVDDGPGAFRCYLDVGLARTTTGARIFGAMKGAVDGGLNIPHSVKRFPGYSAENKSFNAEVHRAHIFGQHVADYMRTLEEEDEDAYKRQFSKYIALGIKADDIETIYKNAHAGIRKDP-AFHKKPEKKVTKKRFNLAKLTLEARKAKIAK 282 The following BLAST results are available for this feature:
BLAST of CF833127 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >CF833127 ID=CF833127; Name=CF833127; organism=Citrus sinensis; type=EST; length=812bpback to top |