CF833131

Overview
NameCF833131
Unique NameCF833131
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length814
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6651 contig Csv1_Contig6651:116..929. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF833131 vs. ExPASy Swiss-Prot
Match: PPA1_SOLLC (Acid phosphatase 1 OS=Solanum lycopersicum GN=APS1 PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.814e-51
Identity = 94/204 (46.08%), Postives = 132/204 (64.71%), Query Frame = 3
Query:  201 LSCLSWRLGVETNNVIGWATVPEKCAGYVGHYMLGQQYRMDSEVVANEAILYAQSLKLAGDGKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAXXXXXXXXXXXXXXXXGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSSHSGETAVVYKSSERKKLEMKGYRIIGNIGDQWSDLLGTNAGNRT 812
            L C +WR  VETNN+  W T+PE+CA YV  YM+G  Y+M+ + V++EA  YA+S+ L  DG+++W+FD+DET LSNLPYY+ + +G++ ++   F++WV  G A                G K+  LTGR E  R+VT  NL +AGF  W KLIL+GS   G+TA  YKS  R  +  +G+RI+GN GDQWSDLLG++   R+
Sbjct:   41 LKCTTWRFVVETNNLSPWKTIPEECADYVKEYMVGPGYKMEIDRVSDEAGEYAKSVDLGDDGRDVWIFDVDETLLSNLPYYSDHRYGLEVFDDVEFDKWVENGTAPALGSSLKLYQEVLKLGFKVFLLTGRSERHRSVTVENLMNAGFHDWHKLILRGSDDHGKTATTYKSERRNAMVEEGFRIVGNSGDQWSDLLGSSMSYRS 244          
BLAST of CF833131 vs. ExPASy Swiss-Prot
Match: VSPA_SOYBN (Stem 28 kDa glycoprotein OS=Glycine max GN=VSPA PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 5.868e-49
Identity = 99/204 (48.53%), Postives = 132/204 (64.71%), Query Frame = 3
Query:  195 PGLSCLSWRLGVETNNVIGWATVPEKCAGYVGHYMLGQQYRMDSEVVANEAILYAQSLKLAGDGKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAXXXXXXXXXXXXXXXXGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKG-SSHSGETAVVYKSSERKKLEMKGYRIIGNIGDQWSDLLGTNAG 803
            P + C SWRL VE +N+ G+ T+PE+C      Y+ G+QYR DS+ V  +A  YA+ L++    K+ +VF ID T LSN+PYY K+G+GV+ +N TL++EWVN G A                G KI+FL+GR  D++ VTEANLK AG+ TWEKLILK     S   AV YK++ R+KL  +GY I+G IGDQWSDLLG + G
Sbjct:   38 PEVKCASWRLAVEAHNIFGFETIPEECVEATKEYIHGEQYRSDSKTVNQQAYFYARDLEV--HPKDTFVFSIDGTVLSNIPYYKKHGYGVEKFNSTLYDEWVNKGNAPALPETLKNYNKLVSLGFKIIFLSGRTLDKQAVTEANLKKAGYHTWEKLILKDPQDPSTPNAVSYKTAAREKLIRQGYNIVGIIGDQWSDLLGGHRG 239          
BLAST of CF833131 vs. ExPASy Swiss-Prot
Match: S25K_SOYBN (Stem 31 kDa glycoprotein (Fragment) OS=Glycine max GN=VSP25 PE=2 SV=2)

HSP 1 Score: 194.512 bits (493), Expect = 5.868e-49
Identity = 99/204 (48.53%), Postives = 132/204 (64.71%), Query Frame = 3
Query:  195 PGLSCLSWRLGVETNNVIGWATVPEKCAGYVGHYMLGQQYRMDSEVVANEAILYAQSLKLAGDGKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAXXXXXXXXXXXXXXXXGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKG-SSHSGETAVVYKSSERKKLEMKGYRIIGNIGDQWSDLLGTNAG 803
            P + C SWRL VE +N+ G+ T+PE+C      Y+ G+QYR DS+ V  +A  YA+ L++    K+ +VF ID T LSN+PYY K+G+GV+ +N TL++EWVN G A                G KI+FL+GR  D++ VTEANLK AG+ TWEKLILK     S   AV YK++ R+KL  +GY I+G IGDQWSDLLG + G
Sbjct:   35 PEVKCASWRLAVEAHNIFGFETIPEECVEATKEYIHGEQYRSDSKTVNQQAYFYARDLEV--HPKDTFVFSIDGTVLSNIPYYKKHGYGVEKFNSTLYDEWVNKGNAPALPETLKNYNKLVSLGFKIIFLSGRTLDKQAVTEANLKKAGYHTWEKLILKDPQDPSTPNAVSYKTAAREKLIRQGYNIVGIIGDQWSDLLGGHRG 236          
BLAST of CF833131 vs. ExPASy Swiss-Prot
Match: VSPB_SOYBN (Stem 31 kDa glycoprotein OS=Glycine max GN=VSPB PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 5.141e-45
Identity = 96/210 (45.71%), Postives = 132/210 (62.86%), Query Frame = 3
Query:  174 GSRNNDVPGLSCLSWRLGVETNNVIGWATVPEKCAGYVGHYMLGQQYRMDSEVVANEAILYAQSLKLAGDGKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAXXXXXXXXXXXXXXXXGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSSHSGETAVVYKSSERKKLEMKGYRIIGNIGDQWSDLLGTNAG 803
            G R+++V    C S+RL VE +N+  + T+PE+C      Y+ G+Q+R DS+ V  +A  YA   ++  +  +I++F ID T LSN+PYY K+G+GV+ +N TL++EWVN G A                G KIVFL+GR  D+  VTEANLK AGF TWE+LILK        A+ YKS+ R+ L  +GYRI+G IGDQWSDLLG + G
Sbjct:   35 GERSSEV---KCASFRLAVEAHNIRAFKTIPEECVEPTKDYINGEQFRSDSKTVNQQAFFYASEREVHHN--DIFIFGIDNTVLSNIPYYEKHGYGVEEFNETLYDEWVNKGDAPALPETLKNYNKLLSLGFKIVFLSGRYLDKMAVTEANLKKAGFHTWEQLILKDPHLITPNALSYKSAMRENLLRQGYRIVGIIGDQWSDLLGDHRG 239          
BLAST of CF833131 vs. ExPASy Swiss-Prot
Match: VSP2_ARATH (Vegetative storage protein 2 OS=Arabidopsis thaliana GN=VSP2 PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.215e-39
Identity = 87/202 (43.07%), Postives = 119/202 (58.91%), Query Frame = 3
Query:  204 SCLSWRLGVETNNVIGWATVPEKCAGYVGHYML-GQQYRMDSEVVANEAILYAQSLKLAGDGKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTG-KAXXXXXXXXXXXXXXXXGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSSHSGETAVVYKSSERKKLEMKGYRIIGNIGDQWSDLLGTNAG 803
            +C SW LGVET+N+I + TVP  C  YV  Y++  +QY+ DS+ V  EA  YA+ L L  D  N+W+FD+D+T LS++PYYAK G+G +  +P  +  W+ TG                   GI+ + L+ R +  +NVT  NL+ AG   W+ LILK +  S    VVYKS  RK L  KGY I+GNIGDQW+DL+    G
Sbjct:   51 NCRSWHLGVETSNIIDFDTVPANCKDYVEDYLITSKQYQYDSKTVCKEAYFYAKGLALKNDTVNVWIFDLDDTLLSSIPYYAKYGYGTEKTDPGAYWLWLGTGASTPGLPEALHLYQNIIELGIEPIILSDRWKLWKNVTLDNLEAAGVTYWKHLILKPNG-SNLRQVVYKSKVRKSLVKKGYNIVGNIGDQWADLVEDTPG 251          
BLAST of CF833131 vs. ExPASy Swiss-Prot
Match: VSP1_ARATH (Vegetative storage protein 1 OS=Arabidopsis thaliana GN=VSP1 PE=2 SV=2)

HSP 1 Score: 160.229 bits (404), Expect = 1.226e-38
Identity = 98/255 (38.43%), Postives = 135/255 (52.94%), Query Frame = 3
Query:   72 SMDIRHLFLATISATSHGFSMDIPHQIHLLRPKAGSRNN----DVPGLS-----CLSWRLGVETNNVIGWATVPEKCAGYVGHYML-GQQYRMDSEVVANEAILYAQSLKLAGDGKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKA-XXXXXXXXXXXXXXXXGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSSHSGETAVVYKSSERKKLEMKGYRIIGNIGDQWSDLLGTNAG 803
            S+ +  L  AT+S      S  +P  I LL       N     +  GLS     C SW LGVET+N+I + TVP  C  YV  Y++  +QY+ DS+ V  EA  YA+ L L  D  N+W+FD+D+T LS++PYYAK G+G +   P  +  W+ +G++                 GI+ + ++ R +    VT  NLK  G   W+ LILK +  S  T VVYKS  R  L  KGY I+GNIGDQW+DL+    G
Sbjct:    5 SLSLLLLLAATVSHVQS--SASVPGLIELLESNTIFGNEAELLEKEGLSINYPNCRSWHLGVETSNIINFDTVPANCKAYVEDYLITSKQYQYDSKTVNKEAYFYAKGLALKNDTVNVWIFDLDDTLLSSIPYYAKYGYGTENTAPGAYWSWLESGESTPGLPETLHLYENLLELGIEPIIISDRWKKLSEVTVENLKAVGVTKWKHLILKPNG-SKLTQVVYKSKVRNSLVKKGYNIVGNIGDQWADLVEDTPG 256          
The following BLAST results are available for this feature:
BLAST of CF833131 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
PPA1_SOLLC2.814e-5146.08Acid phosphatase 1 OS=Solanum lycopersicum GN=APS1... [more]
VSPA_SOYBN5.868e-4948.53Stem 28 kDa glycoprotein OS=Glycine max GN=VSPA PE... [more]
S25K_SOYBN5.868e-4948.53Stem 31 kDa glycoprotein (Fragment) OS=Glycine max... [more]
VSPB_SOYBN5.141e-4545.71Stem 31 kDa glycoprotein OS=Glycine max GN=VSPB PE... [more]
VSP2_ARATH4.215e-3943.07Vegetative storage protein 2 OS=Arabidopsis thalia... [more]
VSP1_ARATH1.226e-3838.43Vegetative storage protein 1 OS=Arabidopsis thalia... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_03B06_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa03B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833131 ID=CF833131; Name=CF833131; organism=Citrus sinensis; type=EST; length=814bp
GCATGGGAGGGGTGTCACTGCCATTATTCTTCTTTTTTCTGGCTACCATA
TCAGCAACATCCCATGGATTTAGCATGGACATCCGCCATCTTTTTCTGGC
TACCATATCAGCAACATCCCATGGATTTAGCATGGACATCCCCCATCAGA
TTCATCTTCTCCGACCGAAAGCCGGTTCCCGGAACAACGATGTTCCCGGC
TTGTCCTGCCTGAGTTGGCGACTCGGAGTGGAAACTAATAACGTTATAGG
ATGGGCGACTGTTCCCGAAAAATGTGCAGGCTACGTGGGGCATTACATGT
TAGGCCAGCAGTACCGCATGGACTCTGAAGTGGTAGCTAATGAGGCCATT
CTCTATGCGCAGAGCCTCAAGCTTGCTGGCGACGGCAAGAACATTTGGGT
TTTCGACATAGATGAAACCTCGCTATCTAATTTGCCATATTATGCTAAGA
ATGGATTCGGGGTGAAGCCATACAACCCTACTTTGTTTAATGAATGGGTG
AACACCGGAAAAGCACCACCGCTGCCAGAGAGCCTTAAGCTTTACAAAAA
ATTATTATTGCTTGGAATTAAGATTGTATTCCTCACGGGAAGACCAGAAG
ATCAGAGAAATGTTACAGAAGCTAATTTAAAGCATGCTGGATTCGACACC
TGGGAGAAGCTCATCCTCAAGGGATCATCTCACTCAGGAGAAACAGCAGT
GGTGTACAAATCAAGTGAAAGAAAGAAGCTTGAGATGAAAGGGTACAGAA
TTATTGGAAACATAGGTGATCAATGGAGCGATCTCCTGGGCACCAACGCC
GGCAATCGGACGTT
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