CF833135
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF833135 vs. ExPASy Swiss-Prot
Match: UBC10_ARATH (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10 PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.105e-17 Identity = 47/77 (61.04%), Postives = 53/77 (68.83%), Query Frame = -1 Query: 181 KVFHRNINSNGSISLDI*KEQRSRVLAISKVLVSMCSXXXXXXXXXXXXPEIGPMSKSDRNKLETSARSWTQKYTMG 411 KVFH NINSNGSI LDI KEQ S L ISKVL+S+CS PEI M K+D+NK E++ARSWTQKY MG Sbjct: 72 KVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTARSWTQKYAMG 148
BLAST of CF833135 vs. ExPASy Swiss-Prot
Match: UBC4_SOLLC (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.361e-17 Identity = 48/77 (62.34%), Postives = 52/77 (67.53%), Query Frame = -1 Query: 181 KVFHRNINSNGSISLDI*KEQRSRVLAISKVLVSMCSXXXXXXXXXXXXPEIGPMSKSDRNKLETSARSWTQKYTMG 411 KVFH NINSNGSI LDI KEQ S L ISKVL+S+CS PEI M K+DR K ET+ARSWTQKY MG Sbjct: 72 KVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAMG 148
BLAST of CF833135 vs. ExPASy Swiss-Prot
Match: UBC9_ARATH (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.144e-17 Identity = 46/77 (59.74%), Postives = 53/77 (68.83%), Query Frame = -1 Query: 181 KVFHRNINSNGSISLDI*KEQRSRVLAISKVLVSMCSXXXXXXXXXXXXPEIGPMSKSDRNKLETSARSWTQKYTMG 411 KVFH NINSNGSI LDI KEQ S L ISKVL+S+CS PEI M K+D+NK E++AR+WTQKY MG Sbjct: 72 KVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTARTWTQKYAMG 148
BLAST of CF833135 vs. ExPASy Swiss-Prot
Match: UBC11_ARATH (Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana GN=UBC11 PE=2 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 1.560e-16 Identity = 46/77 (59.74%), Postives = 53/77 (68.83%), Query Frame = -1 Query: 181 KVFHRNINSNGSISLDI*KEQRSRVLAISKVLVSMCSXXXXXXXXXXXXPEIGPMSKSDRNKLETSARSWTQKYTMG 411 KV+H NINSNGSI LDI KEQ S L ISKVL+S+CS PEI M K+DR+K E++ARSWTQKY MG Sbjct: 72 KVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYESTARSWTQKYAMG 148
BLAST of CF833135 vs. ExPASy Swiss-Prot
Match: UBC28_ARATH (Ubiquitin carrier protein E2 28 OS=Arabidopsis thaliana GN=UBC28 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.037e-16 Identity = 46/77 (59.74%), Postives = 52/77 (67.53%), Query Frame = -1 Query: 181 KVFHRNINSNGSISLDI*KEQRSRVLAISKVLVSMCSXXXXXXXXXXXXPEIGPMSKSDRNKLETSARSWTQKYTMG 411 KVFH N+NSNGSI LDI KEQ S L ISKVL+S+CS PEI M K+DR K E++ARSWTQKY MG Sbjct: 72 KVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTARSWTQKYAMG 148
BLAST of CF833135 vs. ExPASy Swiss-Prot
Match: UBC8_ARATH (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana GN=UBC8 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 4.538e-16 Identity = 46/77 (59.74%), Postives = 51/77 (66.23%), Query Frame = -1 Query: 181 KVFHRNINSNGSISLDI*KEQRSRVLAISKVLVSMCSXXXXXXXXXXXXPEIGPMSKSDRNKLETSARSWTQKYTMG 411 KVFH NINSNGSI LDI KEQ S L ISKVL+S+CS PEI M K+DR K E +AR+WTQKY MG Sbjct: 72 KVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYEATARNWTQKYAMG 148
BLAST of CF833135 vs. ExPASy Swiss-Prot
Match: UBC30_ARATH (Ubiquitin carrier protein E2 30 OS=Arabidopsis thaliana GN=UBC30 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 5.018e-15 Identity = 43/77 (55.84%), Postives = 52/77 (67.53%), Query Frame = -1 Query: 181 KVFHRNINSNGSISLDI*KEQRSRVLAISKVLVSMCSXXXXXXXXXXXXPEIGPMSKSDRNKLETSARSWTQKYTMG 411 KV+H NINSNGSI LDI KEQ S L +SKVL+S+CS PEI + K+DR K E++A+SWTQKY MG Sbjct: 72 KVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAHIYKTDRVKYESTAQSWTQKYAMG 148
BLAST of CF833135 vs. ExPASy Swiss-Prot
Match: UBC29_ARATH (Ubiquitin carrier protein E2 29 OS=Arabidopsis thaliana GN=UBC29 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.245e-14 Identity = 41/76 (53.95%), Postives = 49/76 (64.47%), Query Frame = -1 Query: 184 KVFHRNINSNGSISLDI*KEQRSRVLAISKVLVSMCSXXXXXXXXXXXXPEIGPMSKSDRNKLETSARSWTQKYTM 411 KVFH NINSNG+I LDI K+Q S L ISKVL+S+CS PEI + K+D+ K E ARSWTQKY + Sbjct: 72 KVFHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHIYKTDKTKYEAMARSWTQKYAL 147
BLAST of CF833135 vs. ExPASy Swiss-Prot
Match: UBC4_SCHPO (Ubiquitin-conjugating enzyme E2 4 OS=Schizosaccharomyces pombe GN=ubc4 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.366e-12 Identity = 37/76 (48.68%), Postives = 50/76 (65.79%), Query Frame = -1 Query: 184 KVFHRNINSNGSISLDI*KEQRSRVLAISKVLVSMCSXXXXXXXXXXXXPEIGPMSKSDRNKLETSARSWTQKYTM 411 +++H NINSNGSI LDI ++Q S L ISKVL+S+CS PEI + K+DR++ E SAR WT+KY + Sbjct: 72 RIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHVYKTDRSRYELSAREWTRKYAI 147
BLAST of CF833135 vs. ExPASy Swiss-Prot
Match: UBC4_CANAL (Ubiquitin-conjugating enzyme E2 4 OS=Candida albicans GN=UBC4 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.785e-12 Identity = 37/76 (48.68%), Postives = 48/76 (63.16%), Query Frame = -1 Query: 184 KVFHRNINSNGSISLDI*KEQRSRVLAISKVLVSMCSXXXXXXXXXXXXPEIGPMSKSDRNKLETSARSWTQKYTM 411 K++H NINSNG+I LDI K+Q S L ISKVL+S+CS PEI + K DR K E +A+ WT+KY + Sbjct: 72 KIYHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDANPDDPLVPEIAHIYKQDRKKYEATAKEWTKKYAV 147 The following BLAST results are available for this feature:
BLAST of CF833135 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
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Sequences
The
following sequences are available for this feature:
EST sequence >CF833135 ID=CF833135; Name=CF833135; organism=Citrus sinensis; type=EST; length=411bpback to top |