CF833140
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF833140 vs. ExPASy Swiss-Prot
Match: RL44_GOSHI (60S ribosomal protein L44 OS=Gossypium hirsutum GN=RPL44 PE=3 SV=3) HSP 1 Score: 199.519 bits (506), Expect = 9.133e-51 Identity = 95/103 (92.23%), Postives = 96/103 (93.20%), Query Frame = -1 Query: 205 MVKVPKIKKTFCKSKECRKHPLHKVTQYKKGKDSLAAQGKRRYDGKQSGYGGQTKPVFPKKAKTTKKIVLRLQCQGCKHVFQHPIKRCKLFEIGGDKKGKGTS 513 MV VPK KKT+CKSKECRKH LHKVTQYKKGKDSLAAQGKRRYD KQSGYGGQTKPVF KKAKTTKKIVLRLQCQGCKHV QHPIKRCK FEIGGDKKGKGTS Sbjct: 1 MVNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTS 103
BLAST of CF833140 vs. ExPASy Swiss-Prot
Match: RL36A_ARATH (60S ribosomal protein L36a OS=Arabidopsis thaliana GN=RPL36AA PE=2 SV=3) HSP 1 Score: 187.578 bits (475), Expect = 3.591e-47 Identity = 88/103 (85.44%), Postives = 92/103 (89.32%), Query Frame = -1 Query: 205 MVKVPKIKKTFCKSKECRKHPLHKVTQYKKGKDSLAAQGKRRYDGKQSGYGGQTKPVFPKKAKTTKKIVLRLQCQGCKHVFQHPIKRCKLFEIGGDKKGKGTS 513 MV +PK K T+CK+KEC+KH LHKVTQYKKGKDSLAAQGKRRYD KQSGYGGQTKPVF KKAKTTKKIVLRLQCQ CKH Q PIKRCK FEIGGDKKGKGTS Sbjct: 1 MVNIPKTKNTYCKNKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQSCKHFSQRPIKRCKHFEIGGDKKGKGTS 103
BLAST of CF833140 vs. ExPASy Swiss-Prot
Match: RL44_PHARH (60S ribosomal protein L44 OS=Phaffia rhodozyma GN=RPL44 PE=3 SV=3) HSP 1 Score: 160.999 bits (406), Expect = 3.600e-39 Identity = 74/103 (71.84%), Postives = 85/103 (82.52%), Query Frame = -1 Query: 205 MVKVPKIKKTFCKSKECRKHPLHKVTQYKKGKDSLAAQGKRRYDGKQSGYGGQTKPVFPKKAKTTKKIVLRLQCQGCKHVFQHPIKRCKLFEIGGDKKGKGTS 513 MV VPK ++T+CK K C+KH HKVTQYKKGKDS+ AQGKRRYD KQSGYGGQTKPVF KKAKTTKK+VLRL+C CK+ Q +KRCK FE+GGDKK KG + Sbjct: 1 MVNVPKTRRTYCKGKACKKHTPHKVTQYKKGKDSIFAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKVVLRLECSVCKYKMQMTLKRCKHFELGGDKKTKGAA 103
BLAST of CF833140 vs. ExPASy Swiss-Prot
Match: RL44_CRYNE (60S ribosomal protein L44 OS=Cryptococcus neoformans GN=RPL44 PE=3 SV=3) HSP 1 Score: 159.844 bits (403), Expect = 8.019e-39 Identity = 74/103 (71.84%), Postives = 85/103 (82.52%), Query Frame = -1 Query: 205 MVKVPKIKKTFCKSKECRKHPLHKVTQYKKGKDSLAAQGKRRYDGKQSGYGGQTKPVFPKKAKTTKKIVLRLQCQGCKHVFQHPIKRCKLFEIGGDKKGKGTS 513 MV +PK ++T+CK K CRKH HKVTQYKKGKDSL+AQGKRRYD KQSGYGGQTKPVF KKAKTTKK+VLRL+C CK Q +KRCK FE+GGDKK +G + Sbjct: 1 MVNIPKTRRTYCKGKACRKHTPHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKVVLRLECTVCKTKHQLALKRCKHFELGGDKKQRGAA 103
BLAST of CF833140 vs. ExPASy Swiss-Prot
Match: RL44_COPCI (60S ribosomal protein L44 OS=Coprinopsis cinerea GN=RPL44 PE=3 SV=3) HSP 1 Score: 158.303 bits (399), Expect = 2.333e-38 Identity = 72/103 (69.90%), Postives = 85/103 (82.52%), Query Frame = -1 Query: 205 MVKVPKIKKTFCKSKECRKHPLHKVTQYKKGKDSLAAQGKRRYDGKQSGYGGQTKPVFPKKAKTTKKIVLRLQCQGCKHVFQHPIKRCKLFEIGGDKKGKGTS 513 MV +PK ++T+CK K C+KH HKVTQYKKGKDS+ AQGKRRYD KQSGYGGQTKPVF KKAKTTKK+VLRL+C CK+ Q +KRCK FE+GG+KK KG + Sbjct: 1 MVNIPKTRRTYCKGKTCKKHTPHKVTQYKKGKDSIFAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKVVLRLECTVCKYKMQVSLKRCKHFELGGEKKTKGAA 103
BLAST of CF833140 vs. ExPASy Swiss-Prot
Match: RL44_COPC7 (60S ribosomal protein L44 OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=RPL44 PE=3 SV=2) HSP 1 Score: 158.303 bits (399), Expect = 2.333e-38 Identity = 72/103 (69.90%), Postives = 85/103 (82.52%), Query Frame = -1 Query: 205 MVKVPKIKKTFCKSKECRKHPLHKVTQYKKGKDSLAAQGKRRYDGKQSGYGGQTKPVFPKKAKTTKKIVLRLQCQGCKHVFQHPIKRCKLFEIGGDKKGKGTS 513 MV +PK ++T+CK K C+KH HKVTQYKKGKDS+ AQGKRRYD KQSGYGGQTKPVF KKAKTTKK+VLRL+C CK+ Q +KRCK FE+GG+KK KG + Sbjct: 1 MVNIPKTRRTYCKGKTCKKHTPHKVTQYKKGKDSIFAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKVVLRLECTVCKYKMQVSLKRCKHFELGGEKKTKGAA 103
BLAST of CF833140 vs. ExPASy Swiss-Prot
Match: RL44_PICJA (60S ribosomal protein L44 OS=Pichia jadinii GN=RPL44 PE=3 SV=2) HSP 1 Score: 156.377 bits (394), Expect = 8.866e-38 Identity = 75/101 (74.26%), Postives = 82/101 (81.19%), Query Frame = -1 Query: 211 MVKVPKIKKTFCKSKECRKHPLHKVTQYKKGKDSLAAQGKRRYDGKQSGYGGQTKPVFPKKAKTTKKIVLRLQCQGCKHVFQHPIKRCKLFEIGGDKKGKG 513 MV VPK ++T+CK KECRKH HKVTQYK GK SL AQGKRRYD KQSGYGGQTKPVF KKAKTTKK+VLRL+C CK Q +KRCK FE+GGDKK KG Sbjct: 1 MVNVPKTRRTYCKGKECRKHTQHKVTQYKAGKASLFAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKVVLRLECVVCKTKAQLALKRCKHFELGGDKKQKG 101
BLAST of CF833140 vs. ExPASy Swiss-Prot
Match: RL44_PICCI (60S ribosomal protein L44 OS=Pichia ciferrii GN=RPL44 PE=3 SV=3) HSP 1 Score: 156.377 bits (394), Expect = 8.866e-38 Identity = 75/101 (74.26%), Postives = 82/101 (81.19%), Query Frame = -1 Query: 211 MVKVPKIKKTFCKSKECRKHPLHKVTQYKKGKDSLAAQGKRRYDGKQSGYGGQTKPVFPKKAKTTKKIVLRLQCQGCKHVFQHPIKRCKLFEIGGDKKGKG 513 MV VPK +KT+CK KECRKH HKVTQYK GK SL AQGKRRYD KQSGYGGQTKPVF KKAKTTKK+VLRL+C CK Q +KRCK FE+GGD+K KG Sbjct: 1 MVNVPKTRKTYCKGKECRKHTQHKVTQYKAGKASLFAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKVVLRLECVVCKTKAQLSLKRCKHFELGGDRKQKG 101
BLAST of CF833140 vs. ExPASy Swiss-Prot
Match: RL44_CANGY (60S ribosomal protein L44 OS=Candida glycerinogenes GN=RPL44 PE=3 SV=3) HSP 1 Score: 156.377 bits (394), Expect = 8.866e-38 Identity = 73/103 (70.87%), Postives = 83/103 (80.58%), Query Frame = -1 Query: 205 MVKVPKIKKTFCKSKECRKHPLHKVTQYKKGKDSLAAQGKRRYDGKQSGYGGQTKPVFPKKAKTTKKIVLRLQCQGCKHVFQHPIKRCKLFEIGGDKKGKGTS 513 MV VPK +KT+CK K+C+KH HKVTQYK GK SL +QGKRRYD KQSGYGGQTKPVF KKAKTTKK+VLRL+C CK Q +KRCK FE+GGDKK KG + Sbjct: 1 MVNVPKTRKTYCKGKQCKKHTQHKVTQYKAGKASLYSQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKVVLRLECVACKTKLQLSLKRCKHFELGGDKKQKGAA 103
BLAST of CF833140 vs. ExPASy Swiss-Prot
Match: RL44P_CANMA (60S ribosomal protein L44 P OS=Candida maltosa GN=L41P1A PE=3 SV=3) HSP 1 Score: 155.606 bits (392), Expect = 1.512e-37 Identity = 74/101 (73.27%), Postives = 82/101 (81.19%), Query Frame = -1 Query: 211 MVKVPKIKKTFCKSKECRKHPLHKVTQYKKGKDSLAAQGKRRYDGKQSGYGGQTKPVFPKKAKTTKKIVLRLQCQGCKHVFQHPIKRCKLFEIGGDKKGKG 513 MV VPK +KT+CK +ECRKH HKVTQYK GK SL AQGKRRYD KQSG+GGQTKPVF KKAKTTKK+VLRL+C CK Q +KRCK FE+GGDKK KG Sbjct: 1 MVNVPKTRKTYCKGRECRKHSQHKVTQYKAGKSSLFAQGKRRYDRKQSGFGGQTKPVFHKKAKTTKKVVLRLECVVCKTKAQLALKRCKHFELGGDKKQKG 101 The following BLAST results are available for this feature:
BLAST of CF833140 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >CF833140 ID=CF833140; Name=CF833140; organism=Citrus sinensis; type=EST; length=558bpback to top |