CF833155
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF833155 vs. ExPASy Swiss-Prot
Match: YCO6_SCHPO (Putative nucleosome assembly protein C364.06 OS=Schizosaccharomyces pombe GN=SPCC364.06 PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.912e-27 Identity = 72/178 (40.45%), Postives = 93/178 (52.25%), Query Frame = 2 Query: 2 PDFWLTAMKNNDVLSEEITERDEGALKFLKDIKWFRIDDPKGFKLEFYFDPNPYFKNSVLTKTYHMIDEDEP----ILEKAIGTEIEWYPGXXXXXXXXXXXXXXXXXXXXPITKTE-ECESFFNFFNPPQVPXXXXXXXXXXXXXLQNQMEQDYDIGSTIRDKIIPHAVSWFTGEAI 520 P+FWLTAMKN LSE IT DEGAL L DI+ ++ P GFKLEF F NP+F N +LTKTY+ ++E P + + A G +++W + K +SFFNFFNPP P L +E DY IG ++K+IP AV WFTGEA+ Sbjct: 165 PEFWLTAMKNVLSLSEMITPEDEGALSHLVDIRISYMEKP-GFKLEFEFAENPFFTNKILTKTYYYMEESGPSNVFLYDHAEGDKVDWKENADLTVRTVTKKQRNKNTKQTRVVKVSVPRDSFFNFFNPPTPP--SEEDEESESPELDELLELDYQIGEDFKEKLIPRAVEWFTGEAL 339
BLAST of CF833155 vs. ExPASy Swiss-Prot
Match: NP1L1_PONAB (Nucleosome assembly protein 1-like 1 OS=Pongo abelii GN=NAP1L1 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.709e-26 Identity = 72/186 (38.71%), Postives = 95/186 (51.08%), Query Frame = 2 Query: 2 PDFWLTAMKNNDVLSEEITERDEGALKFLKDIK--WFRIDDPKGFKLEFYFDPNPYFKNSVLTKTYHMIDE---------DEPILEKAIGTEIEWYPG-XXXXXXXXXXXXXXXXXXXXPITKTEECESFFNFFNPPQVPXXXXXXXXXXXXXLQNQMEQDYDIGSTIRDKIIPHAVSWFTGEAIQ 523 P+FWLT KN D+LS+ + E DE LK LKDIK + P F LEF+F+PN YF N VLTKTY M E D P + G +I+W G +TKT +SFFNFF PP+VP + + D++IG +R++IIP +V +FTGEAI+ Sbjct: 168 PEFWLTVFKNVDLLSDMVQEHDEPILKHLKDIKVKFSGAGQPMSFVLEFHFEPNEYFTNEVLTKTYRMRSEPDDSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVSNDSFFNFFAPPEVP-----ESGDLDDDAEAILAADFEIGHFLRERIIPRSVLYFTGEAIE 348
BLAST of CF833155 vs. ExPASy Swiss-Prot
Match: NP1L1_MOUSE (Nucleosome assembly protein 1-like 1 OS=Mus musculus GN=Nap1l1 PE=1 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 4.709e-26 Identity = 73/186 (39.25%), Postives = 95/186 (51.08%), Query Frame = 2 Query: 2 PDFWLTAMKNNDVLSEEITERDEGALKFLKDIKWFRID--DPKGFKLEFYFDPNPYFKNSVLTKTYHMIDE---------DEPILEKAIGTEIEWYPG-XXXXXXXXXXXXXXXXXXXXPITKTEECESFFNFFNPPQVPXXXXXXXXXXXXXLQNQMEQDYDIGSTIRDKIIPHAVSWFTGEAIQ 523 P+FWLT KN D+LS+ + E DE LK LKDIK D P F LEF+F+PN YF N VLTKTY M E D P + G +I+W G +TKT +SFFNFF PP+VP + + D++IG +R++IIP +V +FTGEAI+ Sbjct: 168 PEFWLTVFKNVDLLSDMVQEHDEPILKHLKDIKVKFSDAGQPMSFVLEFHFEPNDYFTNEVLTKTYRMRSEPDDSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVSNDSFFNFFAPPEVP-----ENGDLDDDAEAILAADFEIGHFLRERIIPRSVLYFTGEAIE 348
BLAST of CF833155 vs. ExPASy Swiss-Prot
Match: NP1L1_HUMAN (Nucleosome assembly protein 1-like 1 OS=Homo sapiens GN=NAP1L1 PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.709e-26 Identity = 73/186 (39.25%), Postives = 95/186 (51.08%), Query Frame = 2 Query: 2 PDFWLTAMKNNDVLSEEITERDEGALKFLKDIKWFRID--DPKGFKLEFYFDPNPYFKNSVLTKTYHMIDE---------DEPILEKAIGTEIEWYPG-XXXXXXXXXXXXXXXXXXXXPITKTEECESFFNFFNPPQVPXXXXXXXXXXXXXLQNQMEQDYDIGSTIRDKIIPHAVSWFTGEAIQ 523 P+FWLT KN D+LS+ + E DE LK LKDIK D P F LEF+F+PN YF N VLTKTY M E D P + G +I+W G +TKT +SFFNFF PP+VP + + D++IG +R++IIP +V +FTGEAI+ Sbjct: 168 PEFWLTVFKNVDLLSDMVQEHDEPILKHLKDIKVKFSDAGQPMSFVLEFHFEPNEYFTNEVLTKTYRMRSEPDDSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVSNDSFFNFFAPPEVP-----ESGDLDDDAEAILAADFEIGHFLRERIIPRSVLYFTGEAIE 348
BLAST of CF833155 vs. ExPASy Swiss-Prot
Match: NP1L1_BOVIN (Nucleosome assembly protein 1-like 1 OS=Bos taurus GN=NAP1L1 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.709e-26 Identity = 73/186 (39.25%), Postives = 95/186 (51.08%), Query Frame = 2 Query: 2 PDFWLTAMKNNDVLSEEITERDEGALKFLKDIKWFRID--DPKGFKLEFYFDPNPYFKNSVLTKTYHMIDE---------DEPILEKAIGTEIEWYPG-XXXXXXXXXXXXXXXXXXXXPITKTEECESFFNFFNPPQVPXXXXXXXXXXXXXLQNQMEQDYDIGSTIRDKIIPHAVSWFTGEAIQ 523 P+FWLT KN D+LS+ + E DE LK LKDIK D P F LEF+F+PN YF N VLTKTY M E D P + G +I+W G +TKT +SFFNFF PP+VP + + D++IG +R++IIP +V +FTGEAI+ Sbjct: 168 PEFWLTVFKNVDLLSDMVQEHDEPILKHLKDIKVKFSDAGQPMSFVLEFHFEPNEYFTNEVLTKTYRMRSEPDDSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVSNDSFFNFFAPPEVPESGDLDDDS-----EAILAADFEIGHFLRERIIPRSVLYFTGEAIE 348
BLAST of CF833155 vs. ExPASy Swiss-Prot
Match: NPL1A_XENLA (Nucleosome assembly protein 1-like 1-A OS=Xenopus laevis GN=nap1l1-A PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.370e-25 Identity = 73/186 (39.25%), Postives = 94/186 (50.54%), Query Frame = 2 Query: 2 PDFWLTAMKNNDVLSEEITERDEGALKFLKDIKWFRID--DPKGFKLEFYFDPNPYFKNSVLTKTYHMIDE---------DEPILEKAIGTEIEWYPG-XXXXXXXXXXXXXXXXXXXXPITKTEECESFFNFFNPPQVPXXXXXXXXXXXXXLQNQMEQDYDIGSTIRDKIIPHAVSWFTGEAIQ 523 P+FWLT KN D+LS+ + E DE LK LKDIK D P F LEFYF+PN +F N VLTKTY M E D P + G I+W G +TKT +SFFNFF PP+VP + + D++IG +R++IIP +V +FTGEAI+ Sbjct: 168 PEFWLTVFKNVDLLSDMLQEHDEPILKHLKDIKVKFSDAGQPMSFTLEFYFEPNEFFTNEVLTKTYKMRSEPDESDPFSFDGPEIMGCTGCLIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVPNDSFFNFFTPPEVP-----ENGELDDDAEAILTADFEIGHFLRERIIPRSVLYFTGEAIE 348
BLAST of CF833155 vs. ExPASy Swiss-Prot
Match: NP1L1_XENTR (Nucleosome assembly protein 1-like 1 OS=Xenopus tropicalis GN=nap1l1 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.789e-25 Identity = 71/186 (38.17%), Postives = 95/186 (51.08%), Query Frame = 2 Query: 2 PDFWLTAMKNNDVLSEEITERDEGALKFLKDI--KWFRIDDPKGFKLEFYFDPNPYFKNSVLTKTYHMIDE---------DEPILEKAIGTEIEWYPG-XXXXXXXXXXXXXXXXXXXXPITKTEECESFFNFFNPPQVPXXXXXXXXXXXXXLQNQMEQDYDIGSTIRDKIIPHAVSWFTGEAIQ 523 P+FWLT KN D+LS+ + E DE LK LKDI K+ P F LEF+F+PN +F N VLTKTY M E D P + G I+W G +TKT +SFFNFF+PP+VP + + D++IG +R++IIP +V +FTGEAI+ Sbjct: 169 PEFWLTVFKNVDLLSDMVQEHDEPILKHLKDIKVKFSEAGQPMSFTLEFHFEPNDFFTNEVLTKTYKMRSEPDESDPFSFDGPEIMGCTGCLIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVPNDSFFNFFSPPEVP-----ENGELDDDAEAILTADFEIGHFLRERIIPRSVLYFTGEAIE 349
BLAST of CF833155 vs. ExPASy Swiss-Prot
Match: NPL1B_XENLA (Nucleosome assembly protein 1-like 1-B OS=Xenopus laevis GN=nap1l1-B PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.986e-25 Identity = 70/186 (37.63%), Postives = 95/186 (51.08%), Query Frame = 2 Query: 2 PDFWLTAMKNNDVLSEEITERDEGALKFLKDI--KWFRIDDPKGFKLEFYFDPNPYFKNSVLTKTYHMIDE---------DEPILEKAIGTEIEWYPG-XXXXXXXXXXXXXXXXXXXXPITKTEECESFFNFFNPPQVPXXXXXXXXXXXXXLQNQMEQDYDIGSTIRDKIIPHAVSWFTGEAIQ 523 P+FWLT KN D+LS+ + E DE LK LKDI K+ P F LEF+F+PN +F N +LTKTY M E D P + G I+W G +TKT +SFFNFF+PP+VP + + D++IG +R++IIP +V +FTGEAI+ Sbjct: 169 PEFWLTVFKNVDLLSDMVQEHDEPILKHLKDIKVKFSEAGQPMNFMLEFHFEPNEFFTNELLTKTYKMRSEPDESDPFSFDGPEIMGCTGCLIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVPNDSFFNFFSPPEVP-----ENGELDDDAEAILTADFEIGHFLRERIIPRSVLYFTGEAIE 349
BLAST of CF833155 vs. ExPASy Swiss-Prot
Match: NP1L1_RAT (Nucleosome assembly protein 1-like 1 OS=Rattus norvegicus GN=Nap1l1 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.515e-24 Identity = 73/186 (39.25%), Postives = 94/186 (50.54%), Query Frame = 2 Query: 2 PDFWLTAMKNNDVLSEEITERDEGALKFLKDIKWFRID--DPKGFKLEFYFDPNPYFKNSVLTKTYHMIDE---------DEPILEKAIGTEIEWYPG-XXXXXXXXXXXXXXXXXXXXPITKTEECESFFNFFNPPQVPXXXXXXXXXXXXXLQNQMEQDYDIGSTIRDKIIPHAVSWFTGEAIQ 523 P+FWLT KN D+LS+ + E DE LK LKDIK D P F LEF+F+PN YF N VLTKTY M E D P + G +I+W G +TKT SFFNFF PP+VP + + D++IG +R++IIP +V +FTGEAI+ Sbjct: 168 PEFWLTVFKN-DLLSDMVQEHDEPILKHLKDIKVKFSDAGQPMSFILEFHFEPNEYFTNEVLTKTYRMRSEPDDSDPFSFDGPEIMGCTGCQIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVSKTSFFNFFAPPEVP-----ENGDLDDDXEAILAADFEIGHFLRERIIPRSVLYFTGEAIE 347
BLAST of CF833155 vs. ExPASy Swiss-Prot
Match: NP1L4_HUMAN (Nucleosome assembly protein 1-like 4 OS=Homo sapiens GN=NAP1L4 PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.418e-22 Identity = 71/186 (38.17%), Postives = 90/186 (48.39%), Query Frame = 2 Query: 2 PDFWLTAMKNNDVLSEEITERDEGALKFLKDIKWFRID--DPKGFKLEFYFDPNPYFKNSVLTKTYHMIDEDE---------PILEKAIGTEIEWYPG-XXXXXXXXXXXXXXXXXXXXPITKTEECESFFNFFNPPQVPXXXXXXXXXXXXXLQNQMEQDYDIGSTIRDKIIPHAVSWFTGEAIQ 523 P+FW T +N D+LSE + E DE LK L+DIK D P F LEF+F+PN YF NSVLTKTY M E + P + G I+W G ITK ESFFNFFNP + L + D++IG R++I+P AV +FTGEAI+ Sbjct: 160 PEFWFTIFRNVDMLSELVQEYDEPILKHLQDIKVKFSDPGQPMSFVLEFHFEPNDYFTNSVLTKTYKMKSEPDKADPFSFEGPEIVDCDGCTIDWKKGKNVTVKTIKKKQKHKGRGTVRTITKQVPNESFFNFFNPLKASGDGESLDEDSEFTLAS----DFEIGHFFRERIVPRAVLYFTGEAIE 341 The following BLAST results are available for this feature:
BLAST of CF833155 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >CF833155 ID=CF833155; Name=CF833155; organism=Citrus sinensis; type=EST; length=752bpback to top |