CF833160

Overview
NameCF833160
Unique NameCF833160
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length732
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF833160 vs. ExPASy Swiss-Prot
Match: KADC1_ARATH (Probable adenylate kinase 1, chloroplastic OS=Arabidopsis thaliana GN=At2g37250 PE=2 SV=1)

HSP 1 Score: 298.901 bits (764), Expect = 1.846e-80
Identity = 146/184 (79.35%), Postives = 165/184 (89.67%), Query Frame = -2
Query:  180 QQLSEIVNQGKLVSDEIIFNLLSKRLEAGQAGGESGFILDGFPRTVKQAEILEEVMDIDLVVNLKLCEDVLLEKCLGRRMCSQCGGNFNVANINVKGGNGNPSISMAPLLPPAHCMSKLITRPDDTEEVVKERLRVYNEKSQPVEEFYRNRGKLLEFDLPGGIPESWPKLLEALNLDEYEEKQS 731
            Q+LSEIVNQGKLVSDEII +LLSKRLEAG+A GESGFILDGFPRT++QAEIL +V DIDLVVNLKL E+VL++KCLGRR CSQCG  FNVA+IN+KG NG P ISM PLLPP  CMSKL+TR DDTEEVVK RLR+YNE SQP+EE+YR +GKL+EFDLPGGIPESWP+LLEAL LD+YEEKQS
Sbjct:   98 QKLSEIVNQGKLVSDEIIVDLLSKRLEAGEARGESGFILDGFPRTMRQAEILGDVTDIDLVVNLKLPEEVLVDKCLGRRTCSQCGKGFNVAHINLKGENGRPGISMDPLLPPHQCMSKLVTRADDTEEVVKARLRIYNETSQPLEEYYRTKGKLMEFDLPGGIPESWPRLLEALRLDDYEEKQS 281          
BLAST of CF833160 vs. ExPASy Swiss-Prot
Match: KADC_SOLTU (Adenylate kinase, chloroplastic OS=Solanum tuberosum GN=ADK PE=2 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 1.282e-73
Identity = 141/184 (76.63%), Postives = 158/184 (85.87%), Query Frame = -2
Query:  180 QQLSEIVNQGKLVSDEIIFNLLSKRLEAGQAGGESGFILDGFPRTVKQAEILEEVMDIDLVVNLKLCEDVLLEKCLGRRMCSQCGGNFNVANINVKGGNGNPSISMAPLLPPAHCMSKLITRPDDTEEVVKERLRVYNEKSQPVEEFYRNRGKLLEFDLPGGIPESWPKLLEALNLDEYEEKQS 731
            +QL+EIVNQGKLVSDEII NLLSKRLE+G+A GE+GFILDGFPRTV+QAEIL EV DIDLVVNLKL E VL+EKCLGRR+CS+CG NFNVA+I+V G NG P ISMA L PP     KLITR DDTE +VKERL +Y +KSQPVE+FYR++GKLLEFDLPGGIPESWPKLLE LNLDE E K S
Sbjct:  102 KQLAEIVNQGKLVSDEIILNLLSKRLESGEAKGEAGFILDGFPRTVRQAEILTEVTDIDLVVNLKLPERVLVEKCLGRRICSECGKNFNVASIDVAGENGAPRISMARLNPPFTVCFKLITRADDTEAIVKERLSIYWDKSQPVEDFYRSQGKLLEFDLPGGIPESWPKLLEVLNLDEQEYKLS 285          
BLAST of CF833160 vs. ExPASy Swiss-Prot
Match: KAD_CALS8 (Adenylate kinase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=adk PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 6.037e-23
Identity = 66/182 (36.26%), Postives = 108/182 (59.34%), Query Frame = -2
Query:  201 QQLSEIVNQGKLVSDEIIFNLLSKRLEAGQAGGESGFILDGFPRTVKQAEILEEVM-----DIDLVVNLKLCEDVLLEKCLGRRMCSQCGGNFNVANINVKGGNGNPSISMAPLLPPAHCMSKLITRPDDTEEVVKERLRVYNEKSQPVEEFYRNRGKLLEFDLPGGIPESWPKLLEALNLD 731
            ++  E +++G LV DEI+  ++  RL   Q   ++GF+LDGFPRT+ QAE LE+V+      ID V+N+++ ++ +LE+  GRR+C  CG +F+V     K   G   I          C  +L  R DD EE VK+RL VY+ ++QP+ E+Y+N+G L+       I ++  ++L+AL ++
Sbjct:   47 KKAKEYMDKGLLVPDEIVIEIVKNRLM--QDDCKNGFLLDGFPRTIAQAEALEKVLADLGQKIDKVLNIEVPDEKILERMSGRRICKSCGASFHVVYRPPKK-EGICDI----------CGGQLYQREDDKEETVKKRLEVYHAQTQPLIEYYKNKGLLVTAVGQEEIADTTKEVLKALGVE 215          
BLAST of CF833160 vs. ExPASy Swiss-Prot
Match: KAD_MOOTA (Adenylate kinase OS=Moorella thermoacetica (strain ATCC 39073) GN=adk PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.884e-23
Identity = 66/171 (38.60%), Postives = 93/171 (54.39%), Query Frame = -2
Query:  240 QQLSEIVNQGKLVSDEIIFNLLSKRLEAGQAGGESGFILDGFPRTVKQAEILEEVMD-----IDLVVNLKLCEDVLLEKCLGRRMCSQCGGNFNVANINVKGGNGNPSISMAPLLPPA--HCMSKLITRPDDTEEVVKERLRVYNEKSQPVEEFYRNRGKLLEFDLPGGIP 731
            +Q    +  G+LV DE+   L+ +RL   Q    +GF+LDGFPRTV QAE L+  +      +D V+++++  D LLE+  GRR+C QCG  ++V          NP     P +P     C   L+ R DDTE  V +RL VYNE++ P+  +YR RG L E D    IP
Sbjct:   47 RQAEVYIKGGRLVPDEVTIGLVQERLV--QPDCRNGFLLDGFPRTVAQAEALDSWLSSRGERLDAVIDIEVPRDALLERLTGRRVCRQCGATYHVRY--------NP-----PAVPGKCDACGQDLVQRADDTEATVNKRLDVYNEQTAPLVNYYRQRGLLKEIDGSQAIP 202          
BLAST of CF833160 vs. ExPASy Swiss-Prot
Match: KAD_DESHY (Adenylate kinase OS=Desulfitobacterium hafniense (strain Y51) GN=adk PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.030e-22
Identity = 62/175 (35.43%), Postives = 102/175 (58.29%), Query Frame = -2
Query:  210 EIVNQGKLVSDEIIFNLLSKRLEAGQAGGESGFILDGFPRTVKQAEILEEV-----MDIDLVVNLKLCEDVLLEKCLGRRMCSQCGGNFNVANINVKGGNGNPSISMAPLLPPAHCMSKLITRPDDTEEVVKERLRVYNEKSQPVEEFYRNRGKLLEFDLPGGIPESWPKLLEAL 719
            E ++ G LV DE+   ++++RL   +     GF+LDGFPRTV QA+ L+++     M++D V+N+++ E  LLE+  GRR+C QCGG +++          NP  + A       C  +L  R DDT E  K RL+VYN+++QP+ ++YR +G L E +    I +    +++A+
Sbjct:   51 EYMDAGSLVPDEVTIGIVAERL--AEPDCSKGFLLDGFPRTVAQADALDKILTQLKMNLDGVINIEVPEAKLLERLTGRRICRQCGGTYHMVF--------NPPAAEAVC---DKCGGELYQRSDDTLETAKNRLQVYNDQTQPLIDYYREKGLLKEINGDQDIAQVLQDIVDAM 212          
BLAST of CF833160 vs. ExPASy Swiss-Prot
Match: KAD_DESHD (Adenylate kinase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=adk PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.030e-22
Identity = 62/175 (35.43%), Postives = 102/175 (58.29%), Query Frame = -2
Query:  210 EIVNQGKLVSDEIIFNLLSKRLEAGQAGGESGFILDGFPRTVKQAEILEEV-----MDIDLVVNLKLCEDVLLEKCLGRRMCSQCGGNFNVANINVKGGNGNPSISMAPLLPPAHCMSKLITRPDDTEEVVKERLRVYNEKSQPVEEFYRNRGKLLEFDLPGGIPESWPKLLEAL 719
            E ++ G LV DE+   ++++RL   +     GF+LDGFPRTV QA+ L+++     M++D V+N+++ E  LLE+  GRR+C QCGG +++          NP  + A       C  +L  R DDT E  K RL+VYN+++QP+ ++YR +G L E +    I +    +++A+
Sbjct:   51 EYMDAGSLVPDEVTIGIVAERL--AEPDCSKGFLLDGFPRTVAQADALDKILTQLKMNLDGVINIEVPEAKLLERLTGRRICRQCGGTYHMVF--------NPPAAEAVC---DKCGGELYQRSDDTLETAKNRLQVYNDQTQPLIDYYREKGLLKEINGDQDIAQVLQDIVDAM 212          
BLAST of CF833160 vs. ExPASy Swiss-Prot
Match: KAD_CLOTE (Adenylate kinase OS=Clostridium tetani GN=adk PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.756e-22
Identity = 58/157 (36.94%), Postives = 97/157 (61.78%), Query Frame = -2
Query:  258 VNQGKLVSDEIIFNLLSKRLEAGQAGGESGFILDGFPRTVKQAEILEEVMD-----IDLVVNLKLCEDVLLEKCLGRRMCSQCGGNFNVANINVKGGNGNPSISMAPLLPPAHCMSKLITRPDDTEEVVKERLRVYNEKSQPVEEFYRNRGKLLEFD 713
            +++G+LV DE+   ++  RL  G+   ++GF+LDGFPRTVKQAE L+E +       D  + + + ++++LE+  GRR+C +CG ++++  I  K      +  +  L     C  KL+ R DDT+E V ERL VY++++QP+ E+Y+N+  LL  D
Sbjct:   53 MDKGQLVPDELTIEIVKDRL--GEEDCKNGFLLDGFPRTVKQAEALDEFLQNKSSKTDAALLIDVPQELILERMTGRRVCGECGASYHIKFITPK------TEGVCDL-----CGGKLVQRKDDTKETVLERLEVYSKQTQPLIEYYKNKNVLLALD 196          
BLAST of CF833160 vs. ExPASy Swiss-Prot
Match: KAD_CLOTH (Adenylate kinase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=adk PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.913e-22
Identity = 58/180 (32.22%), Postives = 107/180 (59.44%), Query Frame = -2
Query:  207 QQLSEIVNQGKLVSDEIIFNLLSKRLEAGQAGGESGFILDGFPRTVKQAEILEEVM-----DIDLVVNLKLCEDVLLEKCLGRRMCSQCGGNFNVANINVKGGNGNPSISMAPLLPPAHCMSKLITRPDDTEEVVKERLRVYNEKSQPVEEFYRNRGKLLEFDLPGGIPESWPKLLEALN 731
            ++  E +++G LV DE+  +++  R+   Q   ++GFILDGFPRT+ QAE L+E++     ++D  +N+ + ++ ++++  GRR+CS+CG ++++     K  N   S           C  +LI R DD EE V +RL  Y+++++P+ E+Y  +GKLL      G+ ++  ++L AL+
Sbjct:   47 RKAKEYIDKGLLVPDELTVDIVKDRIS--QPDCKAGFILDGFPRTIYQAERLDEILKELNVELDCALNIYVPDEEIIKRMSGRRVCSKCGMSYHIVYNQPKVENICDS-----------CNGELIQRDDDKEETVIQRLNTYHKQTEPLIEYYEKKGKLLTVHGQEGVDDTTKEVLNALS 213          
BLAST of CF833160 vs. ExPASy Swiss-Prot
Match: KAD_CLOPS (Adenylate kinase OS=Clostridium perfringens (strain SM101 / Type A) GN=adk PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.913e-22
Identity = 61/177 (34.46%), Postives = 101/177 (57.06%), Query Frame = -2
Query:  198 VNQGKLVSDEIIFNLLSKRLEAGQAGGESGFILDGFPRTVKQAEILEEVM-----DIDLVVNLKLCEDVLLEKCLGRRMCSQCGGNFNVANINVKGGNGNPSISMAPLLPPAHCMSKLITRPDDTEEVVKERLRVYNEKSQPVEEFYRNRGKLLEFDLPGGIPESWPKLLEALNLDE 713
            ++ G+LV DE+  N++  RL+  Q   ++G++LDGFPRTV QAE L+  +      ID  + +++ ++ +LE+  GRR+C  CG ++++   N    +G   +          C S +I R DDTEE VKERL VY  ++QP+ +FY+N+ +L   D    I E +  + + L  D+
Sbjct:   53 MDNGQLVPDEVTINMVKDRLQ--QDDCKNGYLLDGFPRTVHQAEALDNFLTEREESIDTALLIEVPKEFILERMTGRRVCPSCGASYHI-KFNPPTNDGKCDL----------CGSDVIQRKDDTEETVKERLDVYENQTQPLIDFYKNKKQLSVVDGTQAINEVFESICKILGSDK 216          
BLAST of CF833160 vs. ExPASy Swiss-Prot
Match: KAD_CLOPE (Adenylate kinase OS=Clostridium perfringens GN=adk PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.913e-22
Identity = 61/177 (34.46%), Postives = 101/177 (57.06%), Query Frame = -2
Query:  198 VNQGKLVSDEIIFNLLSKRLEAGQAGGESGFILDGFPRTVKQAEILEEVM-----DIDLVVNLKLCEDVLLEKCLGRRMCSQCGGNFNVANINVKGGNGNPSISMAPLLPPAHCMSKLITRPDDTEEVVKERLRVYNEKSQPVEEFYRNRGKLLEFDLPGGIPESWPKLLEALNLDE 713
            ++ G+LV DE+  N++  RL+  Q   ++G++LDGFPRTV QAE L+  +      ID  + +++ ++ +LE+  GRR+C  CG ++++   N    +G   +          C S +I R DDTEE VKERL VY  ++QP+ +FY+N+ +L   D    I E +  + + L  D+
Sbjct:   55 MDNGQLVPDEVTINMVKDRLQ--QDDCKNGYLLDGFPRTVHQAEALDNFLTEREESIDTALLIEVPKEFILERMTGRRVCPSCGASYHI-KFNPPTNDGKCDL----------CGSDVIQRKDDTEETVKERLDVYENQTQPLIDFYKNKKQLSVVDGTQAINEVFESICKILGSDK 218          
The following BLAST results are available for this feature:
BLAST of CF833160 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KADC1_ARATH1.846e-8079.35Probable adenylate kinase 1, chloroplastic OS=Arab... [more]
KADC_SOLTU1.282e-7376.63Adenylate kinase, chloroplastic OS=Solanum tuberos... [more]
KAD_CALS86.037e-2336.26Adenylate kinase OS=Caldicellulosiruptor saccharol... [more]
KAD_MOOTA7.884e-2338.60Adenylate kinase OS=Moorella thermoacetica (strain... [more]
KAD_DESHY1.030e-2235.43Adenylate kinase OS=Desulfitobacterium hafniense (... [more]
KAD_DESHD1.030e-2235.43Adenylate kinase OS=Desulfitobacterium hafniense (... [more]
KAD_CLOTE1.756e-2236.94Adenylate kinase OS=Clostridium tetani GN=adk PE=3... [more]
KAD_CLOTH3.913e-2232.22Adenylate kinase OS=Clostridium thermocellum (stra... [more]
KAD_CLOPS3.913e-2234.46Adenylate kinase OS=Clostridium perfringens (strai... [more]
KAD_CLOPE3.913e-2234.46Adenylate kinase OS=Clostridium perfringens GN=adk... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_03C02_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa03C02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833160 ID=CF833160; Name=CF833160; organism=Citrus sinensis; type=EST; length=732bp
TTTTTTTTTTTTTTTTTGATCTAATGAATAGTCAGATCCTAATTCCTTTT
ATTCAAAATTTATTAAAAAAAAAAATTCTCTTCATCACCCAAAATTGATC
CGCATGCACCTTTTACATGCAAAGAATGGCAACACTTACTATTAAAAATA
CAGTAGTATGCAATAATTTATGCAGCAGCAGACTGCTTTTCCTCATACTC
ATCAAGATTTAGAGCTTCCAACAACTTTGGCCAGGATTCTGGGATTCCTC
CGGGTAAATCGAATTCCAACAATTTTCCTCGATTGCGGTAGAATTCCTCC
ACAGGCTGACTCTTTTCATTGTAAACACGAAGCCTTTCTTTAACCACTTC
TTCGGTATCATCTGGTCGAGTGATTAGCTTCGACATACAATGGGCAGGGG
GAAGAAGGGGGGCCATGCTAATTGAAGGGTTCCCGTTCCCACCCTTGACA
TTGATATTGGCGACATTGAAATTTCCTCCACACTGACTGCACATTCTTCT
ACCAAGGCATTTCTCAAGCAAGACATCTTCACAAAGCTTTAGATTAACAA
CCAAATCAATGTCCATCACCTCTTCCAGTATTTCCGCTTGTTTCACTGTC
CGAGGAAAACCATCAAGAATAAAACCCGATTCACCTCCGGCTTGCCCAGC
TTCAAGTCTCTTCGACAATAAGTTGAATATAATTTCATCTGAAACCAACT
TACCTTGGTTTACAATCTCCGAAAGCTGCTGA
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