CF833258

Overview
NameCF833258
Unique NameCF833258
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length920
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF833258 vs. ExPASy Swiss-Prot
Match: E1312_ARATH (Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana GN=At4g29360 PE=1 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 3.644e-45
Identity = 91/216 (42.13%), Postives = 122/216 (56.48%), Query Frame = -2
Query:  308 ETGWPSKGDENENGASVENAAAYNGNLVRRILTGGGTPLRPKADLTVYLFALFNEDQKPGPTSERNYGLFYPNEEKVYNIPFTVEGLKNYHDHRSPVNRSP------------TVRAPVNGGGGVSKSTSGNTWCVANAEVGKEKLQRGLDYACGEGGADCRPIQRGATCYNPNTLEAHASFAFNSYYQKQSRAGGSCYFGGAAYVVTQPPRYGVC 919
            E+GWPSKG   E  A+ ENA AYN NL+R ++   GTP +P  ++ VYLF+LFNE++KPG  SERN+G+FY N   VY + FT E         S    SP            TV     GGGG  K      WC+A+++    +LQ  LD+ACG G  DC  +Q    C+ P+T+ +HAS+AFN+YYQ+   +   C F GA+  V + P YG C
Sbjct:  264 ESGWPSKGSPKETAATPENALAYNTNLIRHVIGDPGTPAKPGEEIDVYLFSLFNENRKPGIESERNWGMFYANGTNVYALDFTGENTTPVSPTNSTTGTSPSPSSSPIINGNSTVTIGGGGGGGTKK------WCIASSQASVTELQTALDWACGPGNVDCSAVQPDQPCFEPDTVLSHASYAFNTYYQQSGASSIDCSFNGASVEVDKDPSYGNC 473          
BLAST of CF833258 vs. ExPASy Swiss-Prot
Match: E133_ARATH (Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana GN=At2g01630 PE=1 SV=2)

HSP 1 Score: 178.333 bits (451), Expect = 5.262e-44
Identity = 83/207 (40.10%), Postives = 118/207 (57.00%), Query Frame = -2
Query:  299 ETGWPSKGDENENGASVENAAAYNGNLVRRILTGGGTPLRPKADLTVYLFALFNEDQKPGPTSERNYGLFYPNEEKVYNIPFTVEGLKNYHDHRSPVNRSPTVRAPVNGGGGVSKSTSGNTWCVANAEVGKEKLQRGLDYACGEGGADCRPIQRGATCYNPNTLEAHASFAFNSYYQKQSRAGGSCYFGGAAYVVTQPPRYGVCEFP 919
            E+GWPSKG  +E+ A+VENA  YN NL++ ++   GTP  P   +T Y++ L+NED +PGP SE+N+GLFY N   VY +                             G  ++  T+  T+C+A  +V ++ LQ  LD+ACG G  DC  + +G +CY P+ + AH+++AFN+YYQK  +A GSC F G A V T  P  G C FP
Sbjct:  263 ESGWPSKGGPSEHDATVENANTYNSNLIQHVINKTGTPKHPGTAVTTYIYELYNEDTRPGPVSEKNWGLFYTNGTPVYTLRLA------------------------GAGAILANDTTNQTFCIAKEKVDRKMLQAALDWACGPGKVDCSALMQGESCYEPDDVVAHSTYAFNAYYQKMGKASGSCDFKGVATVTTTDPSRGTCVFP 445          
BLAST of CF833258 vs. ExPASy Swiss-Prot
Match: E1313_ARATH (Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana GN=At5g56590 PE=1 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 8.975e-44
Identity = 86/209 (41.15%), Postives = 122/209 (58.37%), Query Frame = -2
Query:  296 ETGWPSKGDENENGA-SVENAAAYNGNLVRRILTGGGTPLRPKADLTVYLFALFNEDQKPGPTSERNYGLFYPNEEKVYNIPFTVEGLKNYHDHRSPVNRSPTVRAPVNGGGGVSKSTSGNTWCVANAEVGKEKLQRGLDYACGEGGADCRPIQRGATCYNPNTLEAHASFAFNSYYQKQSRAGGSCYFGGAAYVVTQPPRYGVCEFPT 919
            ETGWP+KG   E  A S +NA  YN N++R ++T  GTP +P   + VY+F+LFNE++K G  SERN+GLFYP++  VY + FT +    +H + S                G + S S N+WC+A+++  +  L+  LD+ACG G  DC  IQ    C+ P+TL +HASF FNSY+Q+      +C FGGA   V + P Y  C + T
Sbjct:  264 ETGWPTKGSPKEKAAASSDNAETYNSNIIRHVVTNQGTPAKPGEAMNVYIFSLFNENRKAGLDSERNWGLFYPDQTSVYQLDFTGKS-NGFHSNSS----------------GTNSSGSSNSWCIASSKASERDLKGALDWACGPGNVDCTAIQPSQPCFQPDTLVSHASFVFNSYFQQNRATDVACSFGGAGVKVNKDPSYDKCIYIT 455          
BLAST of CF833258 vs. ExPASy Swiss-Prot
Match: E131_ARATH (Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana GN=At1g11820 PE=1 SV=2)

HSP 1 Score: 175.637 bits (444), Expect = 3.410e-43
Identity = 88/208 (42.31%), Postives = 119/208 (57.21%), Query Frame = -2
Query:  299 ETGWPSKGDENENGASVENAAAYNGNLVRRILTGGGTPLRPKADLTVYLFALFNEDQKPGPTSERNYGLFYPNEEKVYNIPFTVEGLKNYHDHRSPVNRSPTVRAPVNGGGG-VSKSTSGNTWCVANAEVGKEKLQRGLDYACGEGGADCRPIQRGATCYNPNTLEAHASFAFNSYYQKQSRAGGSCYFGGAAYVVTQPPRYGVCEFP 919
            E+GWPSKGD  E  A+++NA  YN NL++ +    GTPL P+   +VY++ LFNED +  P SE ++GLFY N   VY +                          V+G G  ++  T+  T+C+A   V  + LQ  LD+ACG G ++C  IQ G +CY PN ++ HASFAFNSYYQK+ RA GSC F G A + T  P +G C FP
Sbjct:  175 ESGWPSKGDSKEPYATIDNADTYNSNLIKHVFDRTGTPLHPEMTSSVYIYELFNEDLRAPPVSEASWGLFYGNSTPVYLLH-------------------------VSGSGTFLANDTTNQTYCIAMDGVDAKTLQAALDWACGPGRSNCSEIQPGESCYQPNNVKGHASFAFNSYYQKEGRASGSCDFKGVAMITTTDPSHGSCIFP 357          
BLAST of CF833258 vs. ExPASy Swiss-Prot
Match: E134_ARATH (Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana GN=At3g13560 PE=1 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.771e-42
Identity = 83/207 (40.10%), Postives = 118/207 (57.00%), Query Frame = -2
Query:  302 ETGWPSKGDENENGASVENAAAYNGNLVRRILTGGGTPLRPKADLTVYLFALFNEDQKPGPTSERNYGLFYPNEEKVYNIPFTVEGLKNYHDHRSPVNRSPTVRAPVNGGGGVSKSTSGNT-WCVANAEVGKEKLQRGLDYACGEGGADCRPIQRGATCYNPNTLEAHASFAFNSYYQKQSRAGGSCYFGGAAYVVTQPPRYGVCEF 919
            ETGWPS G  +E  A+V NA  +N NL++R+L   G P +P   +  Y++ L+NED++ GP SERN+G+ +PN   VY +  +                          GG  S + +G++ +CVA A+   +KL  GL++ACG+G A+C  IQ G  CY PN +++HASFAFN YYQK   AGG+C F G A   T+ P Y  C +
Sbjct:  266 ETGWPSSGGSDEAAATVANAETFNTNLIKRVLNNSGPPSQPDIPINTYIYELYNEDKRSGPVSERNWGILFPNGTSVYPLSLS--------------------------GGSSSAALNGSSMFCVAKADADDDKLVDGLNWACGQGRANCAAIQPGQPCYLPNDVKSHASFAFNDYYQKMKSAGGTCDFDGTAITTTRDPSYRTCAY 446          
BLAST of CF833258 vs. ExPASy Swiss-Prot
Match: E132_ARATH (Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana GN=At1g66250 PE=1 SV=2)

HSP 1 Score: 161.384 bits (407), Expect = 6.656e-39
Identity = 80/206 (38.83%), Postives = 113/206 (54.85%), Query Frame = -2
Query:  302 ETGWPSKGDENENGASVENAAAYNGNLVRRILTGGGTPLRPKADLTVYLFALFNEDQKPGPTSERNYGLFYPNEEKVYNIPFTVEGLKNYHDHRSPVNRSPTVRAPVNGGGGVSKSTSGNTWCVANAEVGKEKLQRGLDYACGEGGADCRPIQRGATCYNPNTLEAHASFAFNSYYQKQSRAGGSCYFGGAAYVVTQPPRYGVCEF 919
            E+GWPSKG+ NE  A+++NA  YN NL+R +L   GTP RP   ++ Y++ L+NED K G  SE+N+GLF  N E VY +  T                        N G  ++  T+  T+C A      + LQ  LD+ACG G  DC PI++G TCY P+ + AHA++AF++YY +      +C F G A + T  P +G C F
Sbjct:  272 ESGWPSKGETNEPDATLDNANTYNSNLIRHVLNKTGTPKRPGIAVSTYIYELYNEDTKAG-LSEKNWGLFNANGEPVYVLRLT------------------------NSGSVLANDTTNQTYCTAREGADTKMLQAALDWACGPGKIDCSPIKQGETCYEPDNVVAHANYAFDTYYHQTGNNPDACNFNGVASITTTDPSHGTCVF 452          
BLAST of CF833258 vs. ExPASy Swiss-Prot
Match: E137_ARATH (Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana GN=At4g34480 PE=1 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 7.359e-38
Identity = 85/209 (40.67%), Postives = 117/209 (55.98%), Query Frame = -2
Query:  293 ETGWPSKGDENENGASVENAAAYNGNLVRRILTGGGTPLRPKADLTVYLFALFNEDQKPGPTSERNYGLFYPNEEKVYNIPFTVEGLKNYHDHRSPVNRSPTVRAPVNGGGGVSKSTSGNTWCVANAEVGKEKLQRGLDYACGEGGADCRPIQRGATCYNPNTLEAHASFAFNSYYQKQSRAGGSCYFGGAAYVVTQPPRYGVCEFPTG 919
            ETGW S+GD NE GASV+NA AYNGNL+  + +  GTPL P   +  Y+FAL++E+ KPGP+SER +GLF  +   VY++     GL       S  +++P+ +   +G            WCV       E+LQ  LD+ACG  G DC  IQ G  C+ PN + +HA++A N Y+QK  +    C F   A V +Q P Y  C +P G
Sbjct:  264 ETGWASRGDANEVGASVDNAKAYNGNLIAHLRSMVGTPLMPGKPVDTYIFALYDENLKPGPSSERAFGLFKTDLSMVYDV-----GLAK----SSSSSQTPSGKVTSSG------------WCVPKKGATNEELQASLDWACGH-GIDCGAIQPGGACFEPNNVVSHAAYAMNMYFQKSPKQPTDCDFSKTATVTSQNPSYNNCVYPGG 450          
BLAST of CF833258 vs. ExPASy Swiss-Prot
Match: E13B_WHEAT (Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum GN=GLC1 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.388e-36
Identity = 75/206 (36.41%), Postives = 112/206 (54.37%), Query Frame = -2
Query:  302 ETGWPSKGDENENGASVENAAAYNGNLVRRILTGGGTPLRPKADLTVYLFALFNEDQKPGPTSERNYGLFYPNEEKVYNIPFTVEGLKNYHDHRSPVNRSPTVRAPVNGGGGVSKSTSGNTWCVANAEVGKEKLQRGLDYACGEGGADCRPIQRGATCYNPNTLEAHASFAFNSYYQKQSRAGGSCYFGGAAYVVTQPPRYGVCEF 919
            E GWP++ +  + G  V+ A  +N  ++R   +G GTPL P      YLF+LF+E+QKPGP +ER++GLF P+   VY++    +G           + +P+ +   +GGG          WCVA        LQ  ++YAC  G  DC+PIQ G  C++PN+L+AHAS+  N+YYQ       +C F G   V +  P YG C++
Sbjct:  265 EAGWPTQAEPGQIGVGVQEARDFNEGMIRVCSSGKGTPLMPNRTFETYLFSLFDENQKPGPIAERHFGLFNPDFTPVYDLGLLRDGASVAPTPSPNPSPNPSPKPAPSGGG---------KWCVAKDGANGTDLQNNINYAC--GFVDCKPIQSGGACFSPNSLQAHASYVMNAYYQANGHTDLACDFKGTGIVTSSDPSYGGCKY 459          
BLAST of CF833258 vs. ExPASy Swiss-Prot
Match: EA6_ARATH (Probable glucan endo-1,3-beta-glucosidase A6 OS=Arabidopsis thaliana GN=A6 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.138e-30
Identity = 69/211 (32.70%), Postives = 109/211 (51.66%), Query Frame = -2
Query:  296 ETGWPSKGDENENGASVENAAAYNGNLVRRILTGG--GTPLRPKADLTVYLFALFNEDQKPGPTSERNYGLFYPNEEKVYNIPFTVEG-LKNYHDHRSPVNRSPTVRAPVNGGGGVSKSTSGNTWCVANAEVGKEKLQRGLDYACGEGGADCRPIQRGATCYNPNTLEAHASFAFNSYYQKQSRAGGSCYFGGAAYVVTQPPRYGVCEFPT 919
            ETGWP+ GD +E GA++ NAA YN NL++++      GTP RP   +  ++F+LFNE+QK G  ++R++G+ +P+   +Y++ FT +  L  ++    P N  P                 G  WCV      + +L+  L  AC +    C  +  G  CY P ++  HAS+A NSY+ +       C+F G A+  T  P    C+FP+
Sbjct:  280 ETGWPNFGDIDETGANILNAATYNRNLIKKMSASPPIGTPSRPGLPIPTFVFSLFNENQKSGSGTQRHWGILHPDGSPIYDVDFTGQTPLTGFNPLPKPTNNVPY---------------KGQVWCVPVEGANETELEETLRMACAQSNTTCAALAPGRECYEPVSIYWHASYALNSYWAQFRNQSIQCFFNGLAHETTTNPGNDRCKFPS 475          
BLAST of CF833258 vs. ExPASy Swiss-Prot
Match: E1314_ARATH (Glucan endo-1,3-beta-glucosidase 14 OS=Arabidopsis thaliana GN=At2g27500/F10A12.18 PE=1 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 3.207e-25
Identity = 57/104 (54.81%), Postives = 72/104 (69.23%), Query Frame = -2
Query:  608 ETGWPSKGDENENGASVENAAAYNGNLVRRILTGGGTPLRPKADLTVYLFALFNEDQKPGPTSERNYGLFYPNEEKVYNIPFTVEGLKNYHDHRSPVNRSPTVR 919
            ETGWPSKGDENE GAS ENAA YNGNL++ I    GTP +    + VY+FALFNE+ KPGP SERNYGLFYP+ + VYN+     G++ Y       +R+ T++
Sbjct:  267 ETGWPSKGDENEIGASPENAALYNGNLLKLIQQRKGTPAKQSVPIDVYVFALFNENLKPGPVSERNYGLFYPDGKPVYNV-----GMQGYLPDIIYTSRATTIK 365          
The following BLAST results are available for this feature:
BLAST of CF833258 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
E1312_ARATH3.644e-4542.13Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis... [more]
E133_ARATH5.262e-4440.10Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis ... [more]
E1313_ARATH8.975e-4441.15Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... [more]
E131_ARATH3.410e-4342.31Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis ... [more]
E134_ARATH3.771e-4240.10Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis ... [more]
E132_ARATH6.656e-3938.83Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis ... [more]
E137_ARATH7.359e-3840.67Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis ... [more]
E13B_WHEAT1.388e-3636.41Glucan endo-1,3-beta-glucosidase OS=Triticum aesti... [more]
EA6_ARATH1.138e-3032.70Probable glucan endo-1,3-beta-glucosidase A6 OS=Ar... [more]
E1314_ARATH3.207e-2554.81Glucan endo-1,3-beta-glucosidase 14 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_03E23_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa03E23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833258 ID=CF833258; Name=CF833258; organism=Citrus sinensis; type=EST; length=920bp
TTTTTTTTTTTTTTTAAGCTAAGAGAAAGATTATCATTAATTCATCACAG
TAAATTAGAAGCATACATATAATATAGAAATATAATTTAATTAATTACAG
ACGAGGATGTCAACCAACTACTGAACTATAAAAATACATCAGAAATTCCC
CCAAAATTATATGTAGAATAAGTAGAGCATTGAAACCCAAAAACAGCTAC
AATAATAAAATTAATTAGTTCTCTAATCCTCTTCATTAACCACCAATTAT
AAATAAAACCCATCTGCATTGCCTCTTGAGCCATCATCAGTATCCAGTGG
GAAATTCACACACCCCATACCTCGGTGGCTGCGTAACAACGTAGGCCGCC
CCGCCGAAATAACAACTGCCACCGGCGCGAGATTGCTTCTGGTAGTAGCT
GTTAAACGCGAACGAAGCATGGGCCTCAAGAGTGTTAGGATTGTAACATG
TGGCACCCCGTTGGATTGGACGGCAGTCGGCTCCTCCCTCACCGCAAGCG
TAATCCAAGCCCCTCTGCAGCTTCTCTTTCCCCACTTCGGCGTTGGCCAC
GCACCACGTGTTCCCCGAAGTACTCTTCGACACTCCCCCTCCGCCGTTGA
CCGGCGCCCTCACCGTTGGACTGCGGTTGACCGGCGACCTGTGGTCGTGG
TAATTCTTCAGACCCTCCACCGTAAACGGAATGTTGTAAACTTTTTCCTC
GTTGGGGTAGAAAAGCCCGTAATTTCTCTCCGATGTGGGACCCGGTTTTT
GGTCCTCGTTGAAAAGCGCGAAGAGATAAACGGTCAGATCAGCCTTTGGT
CTCAGAGGGGTCCCACCACCAGTCAAGATTCTGCGGACGAGATTTCCGTT
GTACGCAGCAGCGTTTTCAACGCTTGCACCATTCTCATTCTCATCCCCTT
TAGACGGCCATCCCGTCTCC
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