CF833263

Overview
NameCF833263
Unique NameCF833263
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length722
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF833263 vs. ExPASy Swiss-Prot
Match: A115_TOBAC (Auxin-induced protein PCNT115 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 423.705 bits (1088), Expect = 4.855e-118
Identity = 208/239 (87.03%), Postives = 220/239 (92.05%), Query Frame = 1
Query:   19 IKLGSQGLEVSAQGLGCMGMAAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTNEILLGKALKGGMRERVELATKFGI-----SYADGKREIRGDPAYARAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEAEIVPTCRELGIGIVAYSPLGRGFFSSGPKLVESFSKEDFRQYLPRFQAENL 720
            IKLGSQGLEVSAQGLGCMGM+AFYGPPKPE DMI LIHHAINSGITLLDTSD+YGPHTNEILLGKALKGG RERV LATKFGI       A+GKR + GDPAY RAACEASLKRLDIDCIDLYYQHR+DTRVPIE+T+GELKKLVEEGK+KYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVE EI+PTCRELGIGIVAYSPLGRGF SSGPKL+E  S ED+R+YLPRFQAENL
Sbjct:   11 IKLGSQGLEVSAQGLGCMGMSAFYGPPKPEPDMIQLIHHAINSGITLLDTSDVYGPHTNEILLGKALKGGTRERVVLATKFGIVLGDEKKAEGKRAVHGDPAYVRAACEASLKRLDIDCIDLYYQHRVDTRVPIEITVGELKKLVEEGKLKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEEEIIPTCRELGIGIVAYSPLGRGFLSSGPKLLEDMSNEDYRKYLPRFQAENL 249          
BLAST of CF833263 vs. ExPASy Swiss-Prot
Match: IN22_MAIZE (IN2-2 protein OS=Zea mays GN=IN2-2 PE=2 SV=1)

HSP 1 Score: 418.313 bits (1074), Expect = 2.040e-116
Identity = 198/234 (84.62%), Postives = 220/234 (94.02%), Query Frame = 1
Query:   19 IKLGSQGLEVSAQGLGCMGMAAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTNEILLGKALKGGMRERVELATKFGISYADGKREIRGDPAYARAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEAEIVPTCRELGIGIVAYSPLGRGFFSSGPKLVESFSKEDFRQYLPRFQAENL 720
            IKLGSQGLEVSAQGLGCMGM+AFYGPPKPES+MI LIHHA+++G+T LDTSD+YGPHTNE+LLGKAL+GG+RE+VELATKFG+S+ADGKREI GDPAY R ACE S KRL +DCIDLYYQHRID RVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRD E +I+PTCRELGIGIVAYSPLGRGFFSSG KLV+S S++DFR+++PRFQ ENL
Sbjct:   11 IKLGSQGLEVSAQGLGCMGMSAFYGPPKPESEMIKLIHHAVDAGVTFLDTSDVYGPHTNEVLLGKALQGGVREKVELATKFGVSFADGKREIHGDPAYVRTACEGSFKRLGVDCIDLYYQHRIDKRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDAEEDIIPTCRELGIGIVAYSPLGRGFFSSGAKLVDSLSEQDFRKHMPRFQPENL 244          
BLAST of CF833263 vs. ExPASy Swiss-Prot
Match: YAKC_SCHPO (Aldo-keto reductase yakc [NADP+] OS=Schizosaccharomyces pombe GN=yakc PE=1 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.140e-50
Identity = 111/230 (48.26%), Postives = 146/230 (63.48%), Query Frame = 1
Query:   46 VSAQGLGCMGMAAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTNEILLGKALKG-GMRERVELATKFGISY--ADGKREIRGDPAYARAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEAE---IVPTCRELGIGIVAYSPLGRGFFSSGPKLVESFSKEDFRQYLPRFQAEN 717
            V A G GCMG+ A YGP   E++  A++ HA + G T  D+SD+YG   NE  +G+  K  G R+ + LATKFG       G+  +  +P Y   A + SLKRL IDCIDLYY HR     PIE  +G LKK VE GKI+YIGLSE SA+TIRRA AV+P++AVQ+E+S +S ++E     ++  CRE  I IV Y+PLGRGF +   K  + F + DFR+  PR+Q EN
Sbjct:   13 VPAIGFGCMGLHAMYGPSSEEANQ-AVLTHAADLGCTFWDSSDMYGFGANEECIGRWFKQTGRRKEIFLATKFGYEKNPETGELSLNNEPDYIEKALDLSLKRLGIDCIDLYYVHRFSGETPIEKIMGALKKCVEAGKIRYIGLSECSANTIRRAAAVYPVSAVQVEYSPFSLEIERPEIGVMKACRENNITIVCYAPLGRGFLTGAYKSPDDFPEGDFRRKAPRYQKEN 241          
BLAST of CF833263 vs. ExPASy Swiss-Prot
Match: YCCK_BACSU (Uncharacterized oxidoreductase yccK OS=Bacillus subtilis GN=yccK PE=3 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.356e-27
Identity = 72/198 (36.36%), Postives = 107/198 (54.04%), Query Frame = 1
Query:  124 LIHHAINSGITLLDTSDIYGPHTNEILLGKALKG-GMRERVELATKFGISYADGKREIRGDPAYARAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEAEIVPTCRELGIGIVAYSPLGRGFFSSGPKLVESFSKEDFRQYLPRFQAE 714
            L+  A++ G+  +DT+ IYG   +E L+G+ ++  G+R  + +ATK      DG  E+     + R+  E SLKRL  D IDLYY H  D + P+    G LK+L +EGKIK IG S      ++  +A   +   Q E+SL  RD E E++P C + GI  + Y PL  G  +   K  +    +DFR+  P+FQ E
Sbjct:   41 LVRTALDGGVNFIDTAFIYGLGRSEELIGEVVQERGVRNELIIATKGAHKEVDGSIELDNSREFLRSEVEKSLKRLKTDYIDLYYVHFPDGKTPLAEVAGTLKELKDEGKIKAIGASNLDYQQLQDFNADGYLEVFQAEYSLIQRDAEKELLPYCEKQGISFIPYFPLASGLLTG--KFTQDTVFDDFRKDKPQFQGE 236          
BLAST of CF833263 vs. ExPASy Swiss-Prot
Match: PLR1_SCHPO (Pyridoxal reductase OS=Schizosaccharomyces pombe GN=plr1 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.946e-27
Identity = 87/239 (36.40%), Postives = 129/239 (53.97%), Query Frame = 1
Query:   37 GLEVSAQGLGCMGMAAFYGPPK--PESDMIALIHHAINSGITLLDTSDIYG---PHTNEILLGKALKGGMRE--RVELATKFGISYADGKREIRGDPAYARAACEASLKRL-DIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEAE-IVPTCRELGIGIVAYSPLGRGFFSSGPKLVE---SFSKE-DFRQYLPRFQAE 714
            G +V   G G MG+      PK  P+ +   ++++A++ G    D  + YG   P +N  LL +  +       +V L+ K G+ +     +  G+P +   + E  +  L     +DL+   R+D  VPIE T+  LK  V+ GKI  +GLSE SA TI+RAHAV PI AV++E+SL+SRD+E   I+  CR+L I I+AYSP  RG  +   K VE    F+K   F +YL RF  +
Sbjct:    6 GFKVGPIGFGLMGLT---WKPKQTPDEEAFEVMNYALSQGSNYWDAGEFYGVDPPTSNLDLLARYFEKYPENANKVFLSVKGGLDFKTLVPD--GNPDFVSKSVENVIAHLRGTKKLDLFQCARVDPNVPIETTMKTLKGFVDSGKISCVGLSEVSAETIKRAHAVVPIAAVEVEYSLFSRDIETNGIMDICRKLSIPIIAYSPFCRGLLTGRIKTVEDLKEFAKSFPFLEYLDRFSPD 239          
BLAST of CF833263 vs. ExPASy Swiss-Prot
Match: GS69_BACSU (General stress protein 69 OS=Bacillus subtilis GN=yhdN PE=1 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 1.148e-26
Identity = 77/229 (33.62%), Postives = 118/229 (51.53%), Query Frame = 1
Query:   25 LGSQGLEVSAQGLGCMGMAAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTNEILLGKALKG-GMRERVELATKFGISYADGKREIRGDPAYARAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEAEIVPTCRELGIGIVAYSPLGRGFFSSGPKLVESFSKEDFRQYLPRFQ 708
            +   G+E S  GLG   +         E   I  I  A++ GITL+DT+  YG   +E ++GKA+K  G R++V LATK  + + + +     + A      E SLKRL  D IDLY  H  D  VPIE T   +K+L + GKI+ IG+S  S   +    AV P+  +Q  ++L+ R++E  ++P  ++  I  + Y  L RG  +       +F  +D R + P+FQ
Sbjct:    6 IADTGIEASRIGLGTWAIGGTMWGGTDEKTSIETIRAALDQGITLIDTAPAYGFGQSEEIVGKAIKEYGKRDQVILATKTALDWKNNQLFRHANRARIVEEVENSLKRLQTDYIDLYQVHWPDPLVPIEETAEVMKELYDAGKIRAIGVSNFSIEQMDTFRAVAPLHTIQPPYNLFEREMEESVLPYAKDNKITTLLYGSLCRGLLTGKMTEEYTFEGDDLRNHDPKFQ 234          
BLAST of CF833263 vs. ExPASy Swiss-Prot
Match: YQKF_BACSU (Uncharacterized oxidoreductase yqkF OS=Bacillus subtilis GN=yqkF PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.701e-23
Identity = 74/228 (32.46%), Postives = 116/228 (50.88%), Query Frame = 1
Query:   22 KLGSQGLEVSAQGLGCMGMAAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTNEILLGKALKGGMRERVELATKFGISYADGKREIRGDP--AYARAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEAEIVPTCRELGIGIVAYSPLGRGFFSSGP--KLVESFSKEDFRQY 693
            KLG+  L++S  GLGCM +         ++  ++++  AI  GI  LDT+D+Y    NE ++G A++   R  + LATK G  + DG      DP  AY + A + SL RL  D IDLY  H       I+ TI   ++L +EG I+Y G+S    + I+       I ++ +++SL+ R  E E +P   E  I +VA  P+ +G  +  P  +  ES  +  +  Y
Sbjct:    5 KLGTSDLDISEVGLGCMSLGT------EKNKALSILDEAIELGINYLDTADLYDRGRNEEIVGDAIQN-RRHDIILATKAGNRWDDGSEGWYWDPSKAYIKEAVKKSLTRLKTDYIDLYQLHGGTIEDNIDETIEAFEELKQEGVIRYYGISSIRPNVIKEYVKKSNIVSIMMQFSLFDRRPE-EWLPLLEEHQISVVARGPVAKGLLTEKPLDQASESMKQNGYLSY 224          
BLAST of CF833263 vs. ExPASy Swiss-Prot
Match: PLR2_SCHPO (Probable pyridoxal reductase 2 OS=Schizosaccharomyces pombe GN=SPCC1281.04 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.716e-22
Identity = 79/229 (34.50%), Postives = 121/229 (52.84%), Query Frame = 1
Query:   37 GLEVSAQGLGCMGMAAFYGPPK-PESDMIALIHHAINSGITLLDTSDIYG---PHTNEILLGKALKGGMR--ERVELATKFGISYADGKREIRGDPAYARAACEASLKRL-DIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEAE-IVPTCRELGIGIVAYSPLGRGFFSSGPKLVESFSKEDFRQYLP 699
            G +V   GLG MG+   + P + P      L+++A++ G    +  + YG   P  N  LL    +   +  ++V L+ K G  +        GDP     + + +L RL     +DL+   R+D +VPIE T+  LK  V+ G+I  +GLSEASA +I+RA A+ PI AV+ E+SL+SRD+E   I+ TC +L I I+AY+P   G  +   K  E    +DF +  P
Sbjct:    6 GFKVGPIGLGLMGLT--WRPKQTPIKQAFELMNYALSQGSNYWNAGEFYGINPPTANLDLLADYFEKYPKNADKVFLSVKGGTDFKT--LAPHGDPESVTKSVKNALTRLRGKKKLDLFQCARVDHKVPIETTMKALKAFVDSGEISCVGLSEASAESIKRALAIVPIAAVETEYSLFSRDIEKNGILDTCTQLSIPIIAYAPFCHGLLTGRVKTAEDL--KDFIKAFP 228          
BLAST of CF833263 vs. ExPASy Swiss-Prot
Match: IOLS_BACSU (Protein iolS OS=Bacillus subtilis GN=iolS PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.716e-22
Identity = 73/233 (31.33%), Postives = 113/233 (48.50%), Query Frame = 1
Query:   22 KLGSQGLEVSAQGLG--CMGMAAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTNEILLGKALKGGMRERVELATKFGISYADGKREIRGDPAYARAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEAEIVPTCRELGIGIVAYSPLGRGFFSSGPKLVESFSKEDFRQYLPRFQAE 714
            KLG   L+V   GLG   +G    Y P   E     L+  AI +G+T+LDT+ IYG   +E L+G+ L+   RE V +ATK               P + + + + SLKRL+ D IDL+Y H  D   P +  +  L ++ + GKI+ IG+S  S   ++ A+    +  +Q E++L +R+ E    P  +E  I  + Y PL  G  +       +F + D R     F+ E
Sbjct:    5 KLGKSDLQVFPIGLGTNAVGGHNLY-PNLNEETGKELVREAIRNGVTMLDTAYIYGIGRSEELIGEVLREFNREDVVIATKAAHRKQGNDFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFPDEHTPKDEAVNALNEMKKAGKIRSIGVSNFSLEQLKEANKDGLVDVLQGEYNLLNREAEKTFFPYTKEHNISFIPYFPLVSGLLAGKYTEDTTFPEGDLRNEQEHFKGE 236          
BLAST of CF833263 vs. ExPASy Swiss-Prot
Match: YRPG_BACSU (Uncharacterized oxidoreductase yrpG OS=Bacillus subtilis GN=yrpG PE=3 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 2.926e-22
Identity = 82/230 (35.65%), Postives = 114/230 (49.57%), Query Frame = 1
Query:   25 LGSQGLEVSAQGLGCMGMAAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTN----EILLGK--ALKGGMRERVELATKFGISYAD---GKREIRGDPAYA-RAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHA------VHPITAVQLEWSLWSRDVEAEIVPTCRELGIGIVAYSPLGRGFFSSGPKLVES 666
            LG  GL VS   LG M     +G    E     ++  A+++GI   DT++IYG   N    E ++GK  A  G  RE+V LATK     +D   G  ++RG   Y  R   E SLKRL  D I+LY  H ID R P +      +  V  GK+ YIG S  +   + +A A         +   Q ++SL  R  E E++P  R+LG+G+VA+SPL  G    G K ++S
Sbjct:    6 LGRTGLRVSRLCLGTMN----FGVDTDEKTAFRIMDEALDNGIQFFDTANIYGWGKNAGLTESIIGKWFAQGGQRREKVVLATKVYEPISDPNDGPNDMRGLSLYKIRRHLEGSLKRLQTDHIELYQMHHIDRRTPWDEIWEAFETQVRSGKVDYIGSSNFAGWHLVKAQAEAEKRRFMGLVTEQHKYSLLERTAEMEVLPAARDLGLGVVAWSPLAGGLL--GGKALKS 229          
The following BLAST results are available for this feature:
BLAST of CF833263 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
A115_TOBAC4.855e-11887.03Auxin-induced protein PCNT115 OS=Nicotiana tabacum... [more]
IN22_MAIZE2.040e-11684.62IN2-2 protein OS=Zea mays GN=IN2-2 PE=2 SV=1[more]
YAKC_SCHPO1.140e-5048.26Aldo-keto reductase yakc [NADP+] OS=Schizosaccharo... [more]
YCCK_BACSU1.356e-2736.36Uncharacterized oxidoreductase yccK OS=Bacillus su... [more]
PLR1_SCHPO3.946e-2736.40Pyridoxal reductase OS=Schizosaccharomyces pombe G... [more]
GS69_BACSU1.148e-2633.62General stress protein 69 OS=Bacillus subtilis GN=... [more]
YQKF_BACSU7.701e-2332.46Uncharacterized oxidoreductase yqkF OS=Bacillus su... [more]
PLR2_SCHPO1.716e-2234.50Probable pyridoxal reductase 2 OS=Schizosaccharomy... [more]
IOLS_BACSU1.716e-2231.33Protein iolS OS=Bacillus subtilis GN=iolS PE=1 SV=... [more]
YRPG_BACSU2.926e-2235.65Uncharacterized oxidoreductase yrpG OS=Bacillus su... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_03F01_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa03F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833263 ID=CF833263; Name=CF833263; organism=Citrus sinensis; type=EST; length=722bp
GCGGGGGCAGTGCATATAATCAAGCTTGGTTCACAAGGTCTAGAGGTTTC
AGCACAAGGCTTAGGATGCATGGGCATGGCCGCCTTCTACGGGCCCCCGA
AGCCAGAATCCGACATGATCGCCTTGATCCACCATGCCATTAACAGTGGC
ATCACTCTACTTGACACCTCCGATATTTACGGGCCCCACACCAATGAAAT
CCTTCTGGGAAAGGCTTTGAAGGGAGGAATGAGGGAAAGAGTTGAATTGG
CTACTAAATTTGGTATCAGCTATGCGGATGGTAAAAGGGAAATTCGCGGT
GACCCGGCTTATGCGAGAGCTGCATGTGAGGCCAGCTTGAAGCGTCTGGA
TATTGATTGTATTGATCTTTATTACCAACATCGCATTGATACACGAGTTC
CCATTGAAGTCACGATTGGAGAACTCAAGAAACTAGTTGAAGAGGGTAAG
ATAAAGTATATAGGTCTGTCCGAGGCTTCTGCCTCAACAATTAGACGAGC
TCATGCTGTCCATCCAATAACAGCTGTGCAGTTGGAATGGTCCTTGTGGT
CACGAGATGTGGAGGCAGAGATTGTTCCTACTTGCAGGGAACTTGGCATT
GGAATTGTTGCATACAGTCCTCTAGGACGAGGATTTTTTTCCTCAGGGCC
TAAGTTGGTTGAAAGCTTTTCAAAGGAAGATTTTAGACAGTATCTACCGA
GGTTCCAAGCTGAAAATTTGGA
back to top