CF833820

Overview
NameCF833820
Unique NameCF833820
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length521
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF833820 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.470e-17
Identity = 40/84 (47.62%), Postives = 56/84 (66.67%), Query Frame = -3 
Query:  262 CNEQPLWKVDNYDAASGKWFIPTGGLDGHPGAETLLNWFKLEKIGNFPGTYKIVHCPSVCESCVKHCNNVGR-SFEDGVRRLVL 510
            C+   +W++DNYD ++GKW++ T G+ G PG  TL +WFK+EK G     YK   CPSVC+SC   C+++GR S +DG  RL L
Sbjct:  116 CSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGVL--GYKFRFCPSVCDSCTTLCSDIGRHSDDDGQIRLAL 197
[Close]
BLAST of CF833820 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 79.337 bits (194), Expect = 1.165e-14
Identity = 35/86 (40.70%), Postives = 55/86 (63.95%), Query Frame = -3 
Query:  238 LWKVDNYDAASGKWFIPTGGLDGHPGAETLLNWFKLEKIGNFPGTYKIVHCPSVCESCVKHCNNVGRSFEDGVRRLVLVRDDEPAF 495
            +W++D YD ++G++F+  GG+ G+PG ET+ +WFK+E+     G YK+V CP+VC SC   C +VG   +   RR + + D   AF
Sbjct:  128 VWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEEFCG-SGFYKLVFCPTVCGSCKVKCGDVGIYIDQKGRRRLALSDKPFAF 212
The following BLAST results are available for this feature:
BLAST of CF833820 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ASP_THECC1.470e-1747.6221 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU1.165e-1440.70Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_04F08_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04F08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF833820 ID=CF833820; Name=CF833820; organism=Citrus sinensis; type=EST; length=521bp
TTTTTTTTTTTTTTTTTCAAAAAAGAACACTTGATTTCGATTTTCCCCGG
TTAACACCAACAGTAGAATTTATTAACCCCGAAAGGATCTCAGGGCTTTC
TTATTCATAATTTTAATCCTAGAGATTAAAGAGCAGCTAGCCTGGTCCGT
TATTTAGAATAATAATACCGCTAGCTGGTTAGGGTACATTGATTACACAG
ACGTTGATCTTTCTGTAGCGGGAATTAACACAACAGGAAATGCCGGCTCA
TCATCACGAACCAGAACCAGACGTCGAACGCCATCCTCAAACGAACGGCC
AACGTTGTTGCAGTGTTTTACACAAGACTCGCAAACGGATGGACAATGAA
CGATTTTGTATGTACCTGGAAAATTTCCAATTTTCTCAAGCTTAAACCAA
TTTAGCAAAGTTTCAGCTCCAGGATGACCATCAAGTCCCCCGGTTGGTAT
AAACCATTTGCCTGATGCAGCGTCATAATTATCAACTTTCCACAACGGTT
GTTCGTTACAATAGTCACGTC
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