CF833868
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF833868 vs. ExPASy Swiss-Prot
Match: LBD37_ARATH (LOB domain-containing protein 37 OS=Arabidopsis thaliana GN=LBD37 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 2.007e-31 Identity = 86/186 (46.24%), Postives = 102/186 (54.84%), Query Frame = -1 Query: 333 ACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRPVPELLNSCG---GSPTPTSDDVSEAEVTCTDMSRLQDXXXXXXXXXXXXXXXXXXXXXXXXVEE-------SAMKLQQSDLDLRLTPRFTGK--VPPEVRRRPGTPSMNSEESGTTT-----CFESGLTDHRYLNGAEERKLLNLFV 839 ACGRTVNPVNGA+G+LWTGNW++CQAAVETVLRGG+LRP+PELL G G P+PTS++ SE CT+M LQ S+ S+LDL L P F K P RRR TPSMNSE+SGTTT C + + + G E KLLNLFV Sbjct: 71 ACGRTVNPVNGAIGMLWTGNWNICQAAVETVLRGGSLRPIPELLTHGGGFAGFPSPTSEEASE---ICTEMLNLQQNDSTDRNIYHHSRFSSSRSRSTMDSSSPTKRKRLSSEDQPSSELDLSLIPNFPIKQATPSSTRRRSVTPSMNSEDSGTTTTTTAFCDKGDVYGN---GGGETTKLLNLFV 250
BLAST of CF833868 vs. ExPASy Swiss-Prot
Match: LBD38_ARATH (LOB domain-containing protein 38 OS=Arabidopsis thaliana GN=LBD38 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.453e-29 Identity = 83/182 (45.60%), Postives = 99/182 (54.40%), Query Frame = -1 Query: 336 ACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRPVPELLNSCG--GSPTPTSDDVSEAEVTCTDMSRLQDXXXXXXXXXXXXXXXXXXXXXXXXVEE-------SAMKLQQSDLDLRLTPRFTGKVPPEVRRRPGTPSMNSEESGTTTCFESGLTDHRYL-----NGAEERKLLNLF 839 ACGRTVNPVNGAVGLLWTGNW+VCQAAVETVLRGG+L+P+PELLN G G P+PTSD+ SE CT+M L+ S+ + S+LDL L P + K P + TPSM SEES TT F++ RY+ G KLLNLF Sbjct: 71 ACGRTVNPVNGAVGLLWTGNWNVCQAAVETVLRGGSLKPIPELLNGGGFAGFPSPTSDEASE---ICTEMLNLRKADDSGDRNIYHHCRFSSSRSRSRSTASPPKRKRLSSEQQPSSELDLSLIPIYPIKTLP---FKEDTPSMYSEESVTTVSFQNNNAGDRYVRCGGGGGGATTKLLNLF 246
BLAST of CF833868 vs. ExPASy Swiss-Prot
Match: LBD39_ARATH (LOB domain-containing protein 39 OS=Arabidopsis thaliana GN=LBD39 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.540e-23 Identity = 75/177 (42.37%), Postives = 94/177 (53.11%), Query Frame = -1 Query: 333 ACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRPVPELLNSCGGSPTPTSDDVSEAEVTCTDMSRLQDXXXXXXXXXXXXXXXXXXXXXXXXVEESAMKLQQSD-LDLRLTPRFTGKVPPEV------RRRPGTPSMNSEESGTTTCFESGLT-DHRYLNGAEERKLLNLFV 839 ACGRTVNPVNGAVG+LWT NWHVCQAAVETVLRGGTLRP+ +LL S P+ +E+ D+SR Q +S + LQ + L L +PP RPG+PS EES TT+C+E+G+ D++ E+KLLNLFV Sbjct: 71 ACGRTVNPVNGAVGMLWTRNWHVCQAAVETVLRGGTLRPISDLLES----PSLMISCDESSEIWHQDVSRNQTHHCRFSTSRSTTEMKDSLVNRKRLKSDSDLDLQVNHGLTLTAPAVPVPFLPPSSFCKVVKGDRPGSPS---EESVTTSCWENGMRGDNKQKRNKGEKKLLNLFV 240
BLAST of CF833868 vs. ExPASy Swiss-Prot
Match: LBD40_ARATH (LOB domain-containing protein 40 OS=Arabidopsis thaliana GN=LBD40 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.934e-11 Identity = 27/40 (67.50%), Postives = 34/40 (85.00%), Query Frame = -1 Query: 720 ACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRPV 839 ACGR VNP+ G+VGLLW+GNWH+CQAAVE V+RG + P+ Sbjct: 73 ACGRIVNPIYGSVGLLWSGNWHLCQAAVEAVMRGSPVTPI 112 The following BLAST results are available for this feature:
BLAST of CF833868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF833868 ID=CF833868; Name=CF833868; organism=Citrus sinensis; type=EST; length=839bpback to top |