CF834026

Overview
NameCF834026
Unique NameCF834026
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length447
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF834026 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.680e-12
Identity = 42/141 (29.79%), Postives = 72/141 (51.06%), Query Frame = 1 
Query:   28 STTLPFLIPVLASNSLLVLGTSSVPEPLLDVHGNKVKSTIKYYIGSPIWXXXXXXXXXXXXXXXYCPLDVIQIPSDMQNGIKLTLS-PDNNSTIVRQSTDLNLRFSVLLSGRD-YCNQQPLWKGDNYDAASRKWFITTGGL 444
            +T +  L+    S S      ++   P+LD  G+++++ ++YY+ S I                 CP  V+Q  SD+ NG  +  S  D+   +VR STD+N+ F  +   RD  C+   +W+ DNYD ++ KW++TT G+
Sbjct:    4 ATAVVLLLFAFTSKSYFFGVANAANSPVLDTDGDELQTGVQYYVLSSISGAGGGGLALGRATGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEFVPI---RDRLCSTSTVWRLDNYDNSAGKWWVTTDGV 141
The following BLAST results are available for this feature:
BLAST of CF834026 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ASP_THECC3.680e-1229.7921 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_04M08_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04M08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834026 ID=CF834026; Name=CF834026; organism=Citrus sinensis; type=EST; length=447bp
TGAAAACAACCACCTTTTATTTCATTATCAACAACACTCCCTTTCCTTAT
CCCTGTCTTGGCCTCAAACTCTTTGTTGGTCTTGGGCACCTCATCAGTTC
CTGAACCTCTCCTTGATGTCCACGGCAACAAGGTCAAATCCACCATTAAG
TACTACATAGGCTCACCCATCTGGGGAGCTGGCGGGGGTGGAGTTACCCT
ACACGGTGGCACAAACGGATATTGTCCGCTGGACGTTATCCAGATACCTT
CTGATATGCAAAATGGAATCAAATTAACACTGTCACCGGATAACAATTCT
ACAATTGTCCGACAATCCACTGATCTCAACTTGAGATTCTCAGTGTTGCT
ATCTGGACGAGACTATTGTAACCAACAACCGTTGTGGAAAGGTGATAATT
ATGACGCGGCATCACGCAAATGGTTTATAACAACCGGGGGACTTGAT
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