CF834351

Overview
NameCF834351
Unique NameCF834351
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length463
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig619 contig Csv1_Contig619:990..1412. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834351 vs. ExPASy Swiss-Prot
Match: MAOX_PHAVU (NADP-dependent malic enzyme OS=Phaseolus vulgaris GN=ME1 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.964e-15
Identity = 40/58 (68.97%), Postives = 40/58 (68.97%), Query Frame = 1
Query:    1 KGLIYPPFTNIRXXXXXXXXXXXXXXYDLGLASRLPRPKDLVSYAESCMYSPMYRSYR 174
            KGLIYPPFTNIR              YDLGLAS L RPKDLV YAESCMYSP YRSYR
Sbjct:  532 KGLIYPPFTNIRKISANIAAKVAAKAYDLGLASHLKRPKDLVKYAESCMYSPGYRSYR 589          
BLAST of CF834351 vs. ExPASy Swiss-Prot
Match: MAOX_VITVI (NADP-dependent malic enzyme OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.921e-14
Identity = 36/58 (62.07%), Postives = 43/58 (74.14%), Query Frame = 1
Query:    1 KGLIYPPFTNIRXXXXXXXXXXXXXXYDLGLASRLPRPKDLVSYAESCMYSPMYRSYR 174
            KGLIYPPF+NIR              Y+LGLA+RLP+P++LV YAESCMYSP+YRSYR
Sbjct:  534 KGLIYPPFSNIRKISAHIAANVAAKAYELGLATRLPQPENLVKYAESCMYSPVYRSYR 591          
BLAST of CF834351 vs. ExPASy Swiss-Prot
Match: MAOC_FLAPR (NADP-dependent malic enzyme, chloroplastic OS=Flaveria pringlei GN=MODA PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 3.277e-14
Identity = 36/57 (63.16%), Postives = 42/57 (73.68%), Query Frame = 1
Query:    4 GLIYPPFTNIRXXXXXXXXXXXXXXYDLGLASRLPRPKDLVSYAESCMYSPMYRSYR 174
            GLIYPPFTNIR              Y+LGLASRLP+P++LV+YAESCMYSP YR+YR
Sbjct:  591 GLIYPPFTNIRKISAHIAAKVAAKAYELGLASRLPQPENLVAYAESCMYSPKYRNYR 647          
BLAST of CF834351 vs. ExPASy Swiss-Prot
Match: MAOC_ORYSJ (NADP-dependent malic enzyme, chloroplastic OS=Oryza sativa subsp. japonica GN=ME6 PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 2.124e-13
Identity = 34/58 (58.62%), Postives = 41/58 (70.69%), Query Frame = 1
Query:    1 KGLIYPPFTNIRXXXXXXXXXXXXXXYDLGLASRLPRPKDLVSYAESCMYSPMYRSYR 174
            KG I+PPFTNIR              Y+LGLA+RLP+P+DL  YAESCMY+P+YRSYR
Sbjct:  582 KGSIFPPFTNIRKISARIAASVAAKAYELGLATRLPQPRDLEKYAESCMYTPVYRSYR 639          
BLAST of CF834351 vs. ExPASy Swiss-Prot
Match: MAOC_FLATR (NADP-dependent malic enzyme, chloroplastic OS=Flaveria trinervia GN=MOD1 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.124e-13
Identity = 35/58 (60.34%), Postives = 42/58 (72.41%), Query Frame = 1
Query:    1 KGLIYPPFTNIRXXXXXXXXXXXXXXYDLGLASRLPRPKDLVSYAESCMYSPMYRSYR 174
            KGLI+PPFT+IR              Y+LGLASRLP+P++LV+YAESCMYSP YR YR
Sbjct:  591 KGLIFPPFTSIRKISAHIAAKVAAKAYELGLASRLPQPENLVAYAESCMYSPKYRIYR 648          
BLAST of CF834351 vs. ExPASy Swiss-Prot
Match: MAOX_MESCR (NADP-dependent malic enzyme OS=Mesembryanthemum crystallinum GN=MOD1 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 8.072e-13
Identity = 34/58 (58.62%), Postives = 40/58 (68.97%), Query Frame = 1
Query:    1 KGLIYPPFTNIRXXXXXXXXXXXXXXYDLGLASRLPRPKDLVSYAESCMYSPMYRSYR 174
            KGLIYPPF +IR              Y+LGLASRLP+P DLV +AESCMY+P YRS+R
Sbjct:  528 KGLIYPPFKDIRKISAHIAAGVAAKAYELGLASRLPQPADLVKFAESCMYNPTYRSFR 585          
BLAST of CF834351 vs. ExPASy Swiss-Prot
Match: MAOX_POPTR (NADP-dependent malic enzyme OS=Populus trichocarpa PE=2 SV=3)

HSP 1 Score: 72.4034 bits (176), Expect = 1.054e-12
Identity = 34/58 (58.62%), Postives = 40/58 (68.97%), Query Frame = 1
Query:    1 KGLIYPPFTNIRXXXXXXXXXXXXXXYDLGLASRLPRPKDLVSYAESCMYSPMYRSYR 174
            KGLIYPP +NIR              Y+LGLA+RLPRP++LV +AESCMYSP YR YR
Sbjct:  534 KGLIYPPLSNIRKISVQIAANVAAKAYELGLATRLPRPENLVKHAESCMYSPAYRYYR 591          
BLAST of CF834351 vs. ExPASy Swiss-Prot
Match: MAOC_MAIZE (NADP-dependent malic enzyme, chloroplastic OS=Zea mays GN=MOD1 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 3.067e-12
Identity = 32/58 (55.17%), Postives = 40/58 (68.97%), Query Frame = 1
Query:    1 KGLIYPPFTNIRXXXXXXXXXXXXXXYDLGLASRLPRPKDLVSYAESCMYSPMYRSYR 174
            KG I+PPFT+IR              Y+LGLA+RLP P DLV YAE+CMY+P+YR+YR
Sbjct:  579 KGSIFPPFTSIRKISAHIAAAVAGKAYELGLATRLPPPSDLVKYAENCMYTPVYRNYR 636          
BLAST of CF834351 vs. ExPASy Swiss-Prot
Match: MAOC_SOLLC (NADP-dependent malic enzyme, chloroplastic (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 8.924e-12
Identity = 35/58 (60.34%), Postives = 40/58 (68.97%), Query Frame = 1
Query:    1 KGLIYPPFTNIRXXXXXXXXXXXXXXYDLGLASRLPRPKDLVSYAESCMYSPMYRSYR 174
            KG   PPF+NIR              Y+LGLA+RLP+PKDLV+YAESCMYSP YRSYR
Sbjct:  517 KGTHIPPFSNIRKISAHIAKVAAKA-YELGLATRLPQPKDLVAYAESCMYSPAYRSYR 573          
The following BLAST results are available for this feature:
BLAST of CF834351 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
MAOX_PHAVU2.964e-1568.97NADP-dependent malic enzyme OS=Phaseolus vulgaris ... [more]
MAOX_VITVI1.921e-1462.07NADP-dependent malic enzyme OS=Vitis vinifera PE=2... [more]
MAOC_FLAPR3.277e-1463.16NADP-dependent malic enzyme, chloroplastic OS=Flav... [more]
MAOC_ORYSJ2.124e-1358.62NADP-dependent malic enzyme, chloroplastic OS=Oryz... [more]
MAOC_FLATR2.124e-1360.34NADP-dependent malic enzyme, chloroplastic OS=Flav... [more]
MAOX_MESCR8.072e-1358.62NADP-dependent malic enzyme OS=Mesembryanthemum cr... [more]
MAOX_POPTR1.054e-1258.62NADP-dependent malic enzyme OS=Populus trichocarpa... [more]
MAOC_MAIZE3.067e-1255.17NADP-dependent malic enzyme, chloroplastic OS=Zea ... [more]
MAOC_SOLLC8.924e-1260.34NADP-dependent malic enzyme, chloroplastic (Fragme... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_05G05_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834351 ID=CF834351; Name=CF834351; organism=Citrus sinensis; type=EST; length=463bp
AAGGGATTGATATACCCACCATTCACTAATATCAGAAAGATCTCTGCCCA
CATTGCTGCTAAAGTTGCTGCCAAGGCATATGACCTTGGTCTGGCTTCCC
GTCTTCCTCGTCCTAAGGATCTAGTGAGTTACGCTGAGAGCTGCATGTAC
AGCCCAATGTACCGAAGCTACCGTTGAACTGAACTCCATGTGGAAGTGTG
CGATTATAGTCTGCATTCTGCAATCTGCTGCGAACCTAGTTATATTAATT
TTTGTTCTTTTTAATATTTCTTTGTCGCCTGTTTATCAGTTTAAATTTAG
TTTTCTATTTTGGTTTGTTTTAATCATGTAGAGGTTCTTAGCATTGCTAT
CAGGAACCTCCTTTTTCTTTTTGTTCCTTTATTGATTGAAAATGATACCA
ACTTTCCCTAGTTTCAGCAGAAATAAATTTCACCGGAACCAAAAAATGAA
TAATAAAAAAAAA
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