CF834354
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834354 vs. ExPASy Swiss-Prot
Match: SKI11_ARATH (F-box/kelch-repeat protein SKIP11 OS=Arabidopsis thaliana GN=SKIP11 PE=1 SV=2) HSP 1 Score: 186.037 bits (471), Expect = 8.283e-47 Identity = 94/172 (54.65%), Postives = 118/172 (68.60%), Query Frame = 2 Query: 20 SPRXLFGSGSLPSIAIIAGGSDNNGHVLKSAELYDSTTGRWEMLPSMHSPRRLCSGFFMDGKFYVIGGM-SSPTVSLTCGEEFDLETRKWRKIEGMYP--------NVNRAAQAPPLVAVVDNQLYALEYLTNMVKKYDKLKNTWDVLGRLPVRADLSNGWGLAFKACGNEL 508 SPR LFGS SL IAI AGG D+ G +L AE+Y+S W LP M+ PR++CSG FMDGKFYVIGG+ + + LTCGEE+DLET+KW +I + P +++ AA+APPLVAVV+NQLYA ++ V+KYDK W +GRLP RA NGWGLAF+ACG L Sbjct: 247 SPRCLFGSASLGEIAIFAGGCDSQGKILDFAEMYNSELQTWITLPRMNKPRKMCSGVFMDGKFYVIGGIGGADSKGLTCGEEYDLETKKWTQIPDLSPPRSRADQADMSPAAEAPPLVAVVNNQLYAADHADMEVRKYDKENKKWLTVGRLPERAGSVNGWGLAFRACGERL 418
BLAST of CF834354 vs. ExPASy Swiss-Prot
Match: FBK15_ARATH (F-box/kelch-repeat protein At1g26930 OS=Arabidopsis thaliana GN=At1g26930 PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 2.946e-44 Identity = 90/174 (51.72%), Postives = 119/174 (68.39%), Query Frame = 2 Query: 23 PRXLFGSGSLPSIAIIAGGSDNNGHVLKSAELYDSTTGRWEMLPSMHSPRRLCSGFFMDGKFYVIGGM-----SSPTVSLTCGEEFDLETRKWRKIEGMYP-------NVNRAAQAPPLVAVVDNQLYALEYLTNMVKKYDKLKNTWDVLGRLPVRADLSNGWGLAFKACGNEL 508 PR LFGS S IA++AGG D++G +L +AELY+ W +LP M+ R++CSG FMDGKFYVIGG+ + P V LTCGEEFDL+TRKW +I M P ++ AA APPLVAVV++QLYA ++ V++YDK K W+ +G LP +A NGWGLAF+ACG+ + Sbjct: 201 PRCLFGSASYGEIAVLAGGCDSSGRILDTAELYNYEDQTWLVLPGMNKRRKMCSGVFMDGKFYVIGGIGVGEENEPKV-LTCGEEFDLKTRKWTEIPEMSPPRSNQGNGMSAAAMAPPLVAVVNDQLYAADHAGMAVRRYDKEKRVWNKVGNLPEQAGSMNGWGLAFRACGDRI 373
BLAST of CF834354 vs. ExPASy Swiss-Prot
Match: FBK29_ARATH (F-box/kelch-repeat protein At1g74510 OS=Arabidopsis thaliana GN=At1g74510 PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 5.556e-43 Identity = 87/178 (48.88%), Postives = 110/178 (61.80%), Query Frame = 2 Query: 23 PRXLFGSGSLPSIAIIAGGSDNNGHVLKSAELYDSTTGRWEMLPSMHSPRRLCSGFFMDGKFYVIGGM-SSPTVSLTCGEEFDLETRKWRKIEGMYPN---------------VNRAAQAPPLVAVVDNQLYALEYLTNMVKKYDKLKNTWDVLGRLPVRADLSNGWGLAFKACGNEL 508 PR LFGS SL IA+IAGG D G +L SAELY+S TG W ++PSM+ R++CS FMDG FY IGG+ + L CGE +DL+ + W I M P A++APPLVAVV ++LYA Y VKKYDK N W+ +G LP RA NGWG+AF+ACG++L Sbjct: 225 PRCLFGSASLGEIAVIAGGCDPRGRILSSAELYNSETGEWTVIPSMNKARKMCSSVFMDGNFYCIGGIGEGNSKMLLCGEVYDLKKKTWTLIPNMLPERSSGGGGDQAKEIAAATAASEAPPLVAVVKDELYAANYAQQEVKKYDKRLNVWNKVGNLPERASSMNGWGMAFRACGDQL 402
BLAST of CF834354 vs. ExPASy Swiss-Prot
Match: FBK70_ARATH (F-box/kelch-repeat protein At3g27150 OS=Arabidopsis thaliana GN=At3g27150 PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.050e-33 Identity = 72/174 (41.38%), Postives = 106/174 (60.92%), Query Frame = 2 Query: 2 KSEAI*SPRXLFGSGSLPSIAIIAGGSDNNGH----VLKSAELYDSTTGRWEMLPSMHSPRRLCSGFFMDGKFYVIGGMSSPTVSLTCGEEFDLETRKWRKIEGMYPNVN-RAAQAPPLVAVVDNQLYALEYLTNMVKKYDKLKNTWDVLGRLPVRADLSNGWGLAFKACGNEL 508 K A+ +PR LF S + ++ +AGG G+ V+ S E YDS T W +L MH R+ CSG ++ GKFYV+GG +LTCGE +D +T W I + +++ + Q+PPL+AVV + LY+LE N ++ YD N+W LG +PVRA + GWG+AFK+ G++L Sbjct: 194 KGPAMITPRILFASATCGTVVFVAGGLKIEGNGTMEVVDSVEKYDSKTKTWTLLRGMHKRRKFCSGCYLRGKFYVLGGRDENGQNLTCGESYDEKTNTWELIPDILKDMSFSSVQSPPLIAVVGDDLYSLETSANELRVYDANANSWKKLGDVPVRAKSNGGWGVAFKSLGDKL 367 The following BLAST results are available for this feature:
BLAST of CF834354 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF834354 ID=CF834354; Name=CF834354; organism=Citrus sinensis; type=EST; length=509bpback to top |