CF834362

Overview
NameCF834362
Unique NameCF834362
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length311
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9507 contig Csv1_Contig9507:210..520. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834362 vs. ExPASy Swiss-Prot
Match: MO25N_ARATH (Putative MO25-like protein At5g47540 OS=Arabidopsis thaliana GN=At5g47540 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 3.006e-28
Identity = 61/99 (61.62%), Postives = 83/99 (83.84%), Query Frame = 2
Query:   23 LKGLSKSKPRTPVYIVRQTRDLIIYANRSANV---RESKREYKMADLCKNIRELKAILYGNSESEPASEAWAQLTAQLFRENTSRLLITWLPKVNLEAR 310
            +KGL KSKPRTP  +VRQTRDL+++++RS ++   R+SKR+ KMA+L +NIR++K+ILYGNSE+EP +EA AQLT + F+E+T RLLIT LPK+NLE R
Sbjct:    1 MKGLFKSKPRTPADLVRQTRDLLLFSDRSTSLPDLRDSKRDEKMAELSRNIRDMKSILYGNSEAEPVAEACAQLTQEFFKEDTLRLLITCLPKLNLETR 99          
BLAST of CF834362 vs. ExPASy Swiss-Prot
Match: MO25M_ARATH (Putative MO25-like protein At4g17270 OS=Arabidopsis thaliana GN=At4g17270 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.669e-27
Identity = 62/99 (62.63%), Postives = 79/99 (79.80%), Query Frame = 2
Query:   23 LKGLSKSKPRTPVYIVRQTRDLIIYANRS---ANVRESKREYKMADLCKNIRELKAILYGNSESEPASEAWAQLTAQLFRENTSRLLITWLPKVNLEAR 310
            ++GL KSKPRTP  IVRQTRDL++YA+RS    ++RESKRE KM +L K+IR+LK ILYGNSE+EP +EA AQLT + F+ +T R L+T LP +NLEAR
Sbjct:    1 MRGLFKSKPRTPADIVRQTRDLLLYADRSNSFPDLRESKREEKMVELSKSIRDLKLILYGNSEAEPVAEACAQLTQEFFKADTLRRLLTSLPNLNLEAR 99          
BLAST of CF834362 vs. ExPASy Swiss-Prot
Match: MO25L_ARATH (MO25-like protein At2g03410 OS=Arabidopsis thaliana GN=At2g03410 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 3.331e-19
Identity = 53/99 (53.54%), Postives = 66/99 (66.67%), Query Frame = 2
Query:   23 LKGLSKSKPRTPVYIVRQTRDLIIYAN---RSANVRESKREYKMADLCKNIRELKAILYGNSESEPASEAWAQLTAQLFRENTSRLLITWLPKVNLEAR 310
            +KGL K+K R P  IVRQTRDLI  A       + R SKR    A+LC+NIR+LK+ILYGN E+EP  EA   LT + FR +T R LI  +PK++LEAR
Sbjct:    1 MKGLFKNKSRLPGEIVRQTRDLIALAESEEEETDARNSKRLGICAELCRNIRDLKSILYGNGEAEPVPEACLLLTQEFFRADTLRPLIKSIPKLDLEAR 99          
The following BLAST results are available for this feature:
BLAST of CF834362 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
MO25N_ARATH3.006e-2861.62Putative MO25-like protein At5g47540 OS=Arabidopsi... [more]
MO25M_ARATH5.669e-2762.63Putative MO25-like protein At4g17270 OS=Arabidopsi... [more]
MO25L_ARATH3.331e-1953.54MO25-like protein At2g03410 OS=Arabidopsis thalian... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_05G12_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834362 ID=CF834362; Name=CF834362; organism=Citrus sinensis; type=EST; length=311bp
GAATTACGACCCTAACACGAAACTGAAGGGACTTTCCAAATCCAAGCCTC
GTACTCCCGTCTACATCGTCCGCCAAACTCGGGATCTTATTATTTACGCC
AATCGCAGCGCAAATGTTCGGGAGTCCAAGCGCGAATACAAGATGGCAGA
CTTATGCAAAAACATCCGGGAGTTAAAGGCAATACTTTATGGCAATAGTG
AATCTGAGCCAGCTTCAGAGGCATGGGCACAATTGACTGCACAGTTGTTC
AGGGAAAACACATCACGGCTTTTGATAACTTGGCTTCCAAAGGTGAACTT
GGAGGCAAGGA
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