CF834381

Overview
NameCF834381
Unique NameCF834381
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length572
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1574 contig Csv1_Contig1574:1298..1869. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834381 vs. ExPASy Swiss-Prot
Match: AROF_TOBAC (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Nicotiana tabacum GN=DHAPS-1 PE=2 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 3.522e-61
Identity = 111/118 (94.07%), Postives = 114/118 (96.61%), Query Frame = 3
Query:    3 PHLLLAVRRSGQIVTWAFDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLTKRRI 356
            PHL+ AVRR+GQIVTW  DPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERL KRR+
Sbjct:  417 PHLIRAVRRAGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRRL 534          
BLAST of CF834381 vs. ExPASy Swiss-Prot
Match: AROG_SOLLC (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 1.748e-60
Identity = 109/118 (92.37%), Postives = 114/118 (96.61%), Query Frame = 3
Query:    3 PHLLLAVRRSGQIVTWAFDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLTKRRI 356
            PHL+ AVRR+GQIVTW  DPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVH+QEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLEL+FIIAERL KRR+
Sbjct:  416 PHLIRAVRRAGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHDQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELSFIIAERLRKRRL 533          
BLAST of CF834381 vs. ExPASy Swiss-Prot
Match: AROF_SOLTU (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Solanum tuberosum GN=SHKA PE=1 SV=2)

HSP 1 Score: 231.876 bits (590), Expect = 1.748e-60
Identity = 109/118 (92.37%), Postives = 114/118 (96.61%), Query Frame = 3
Query:    3 PHLLLAVRRSGQIVTWAFDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLTKRRI 356
            PHL+ AVRR+GQIVTW  DPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVH+QEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLEL+FIIAERL KRR+
Sbjct:  416 PHLIRAVRRAGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHDQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELSFIIAERLRKRRL 533          
BLAST of CF834381 vs. ExPASy Swiss-Prot
Match: AROG_ORYSJ (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=DAHPS2 PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.253e-58
Identity = 106/118 (89.83%), Postives = 111/118 (94.07%), Query Frame = 3
Query:    3 PHLLLAVRRSGQIVTWAFDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLTKRRI 356
            PHL+ AVR SGQIVTW  DPMHGNTIKAPCGLKTRPFDSI AEVRAFFDVH+QEGSHPGG+HLEMTGQNVTECIGGSRTVTFDDLS RYHTHCDPRLNASQSLELAFIIAERL +RR+
Sbjct:  407 PHLIRAVRNSGQIVTWITDPMHGNTIKAPCGLKTRPFDSILAEVRAFFDVHDQEGSHPGGIHLEMTGQNVTECIGGSRTVTFDDLSDRYHTHCDPRLNASQSLELAFIIAERLRRRRM 524          
BLAST of CF834381 vs. ExPASy Swiss-Prot
Match: AROF_ARATH (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=DHS1 PE=2 SV=2)

HSP 1 Score: 221.476 bits (563), Expect = 2.362e-57
Identity = 105/117 (89.74%), Postives = 109/117 (93.16%), Query Frame = 3
Query:    3 PHLLLAVRRSGQIVTWAFDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLTKRR 353
            PHL+ AVRRSGQIVTW  DPMHGNTIKAPCGLKTR FDSI AEVRAF DVHEQEGSH GG+HLEMTGQNVTECIGGSRTVT+DDLSSRYHTHCDPRLNASQSLELAFI+AERL KRR
Sbjct:  402 PHLIRAVRRSGQIVTWVCDPMHGNTIKAPCGLKTRAFDSILAEVRAFLDVHEQEGSHAGGIHLEMTGQNVTECIGGSRTVTYDDLSSRYHTHCDPRLNASQSLELAFIVAERLRKRR 518          
BLAST of CF834381 vs. ExPASy Swiss-Prot
Match: AROF_ORYSJ (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=DAHPS1 PE=2 SV=2)

HSP 1 Score: 218.394 bits (555), Expect = 2.000e-56
Identity = 104/118 (88.14%), Postives = 110/118 (93.22%), Query Frame = 3
Query:    3 PHLLLAVRRSGQIVTWAFDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLTKRRI 356
            PHL+ AVR +GQIVTW  DPMHGNTIKAPCGLKTRPFDSI AEVRAFFDVH+QEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDL  RYHTHCDPRLNASQSLEL+FIIAERL ++RI
Sbjct:  422 PHLIRAVRHAGQIVTWITDPMHGNTIKAPCGLKTRPFDSI-AEVRAFFDVHDQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLGDRYHTHCDPRLNASQSLELSFIIAERLRRKRI 538          
BLAST of CF834381 vs. ExPASy Swiss-Prot
Match: AROG_SOLTU (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Solanum tuberosum GN=SHKB PE=2 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 7.599e-56
Identity = 101/117 (86.32%), Postives = 109/117 (93.16%), Query Frame = 3
Query:    6 HLLLAVRRSGQIVTWAFDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLTKRRI 356
            HL+ AVR +GQIVTW  DPMHGNTIKAPCGLKTR FDSI AEVRAFFDVHEQEGSHPGG+HLEMTGQNVTECIGGSRTVT+DDL SRYHTHCDPRLNASQSLEL+FI+AERL +RR+
Sbjct:  390 HLVRAVRGAGQIVTWVCDPMHGNTIKAPCGLKTRAFDSILAEVRAFFDVHEQEGSHPGGIHLEMTGQNVTECIGGSRTVTYDDLGSRYHTHCDPRLNASQSLELSFIVAERLRRRRM 506          
BLAST of CF834381 vs. ExPASy Swiss-Prot
Match: AROF_SOLLC (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 3.193e-54
Identity = 99/117 (84.62%), Postives = 108/117 (92.31%), Query Frame = 3
Query:    6 HLLLAVRRSGQIVTWAFDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLTKRRI 356
            HL+ AVR +GQIVTW  DPMHGNTIKAPCGLKTR FDSI+AEVRAFFDVHEQEGSHP  +HLEMTGQNVTECIGGSRTVT+DDL SRYHTHCDPRLNASQSLEL+FI+AERL +RR+
Sbjct:  390 HLVRAVRGAGQIVTWVCDPMHGNTIKAPCGLKTRAFDSIQAEVRAFFDVHEQEGSHPWCIHLEMTGQNVTECIGGSRTVTYDDLGSRYHTHCDPRLNASQSLELSFIVAERLRRRRM 506          
BLAST of CF834381 vs. ExPASy Swiss-Prot
Match: AROG_ARATH (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=DHS2 PE=2 SV=2)

HSP 1 Score: 207.994 bits (528), Expect = 2.703e-53
Identity = 98/118 (83.05%), Postives = 109/118 (92.37%), Query Frame = 3
Query:    3 PHLLLAVRRSGQIVTWAFDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLTKRRI 356
            P+L+ AVR +GQIVTW  DPMHGNTI AP GLKTR FD+IRAE+RAFFDVH+QEGS PGGVHLEMTGQNVTEC+GGSRT+T++DLSSRYHTHCDPRLNASQSLELAFIIAERL KRR+
Sbjct:  379 PNLIRAVRGAGQIVTWVSDPMHGNTIMAPGGLKTRSFDAIRAELRAFFDVHDQEGSFPGGVHLEMTGQNVTECVGGSRTITYNDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRRL 496          
BLAST of CF834381 vs. ExPASy Swiss-Prot
Match: AROF_CATRO (Probable phospho-2-dehydro-3-deoxyheptonate aldolase, chloroplastic OS=Catharanthus roseus GN=DHS1 PE=2 SV=2)

HSP 1 Score: 175.637 bits (444), Expect = 1.487e-43
Identity = 85/115 (73.91%), Postives = 94/115 (81.74%), Query Frame = 3
Query:    3 PHLLLAVRRSGQIVTWAFDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLTK 347
            PHL+ AVR +GQIVTW  DPMHGNTIKAPCGLKTR FD+I AEVRAF+DVHEQEG+ PG           TEC+GGSRT+T+DD  +RYHTHCDPRLNASQSLELAFIIAERL K
Sbjct:  380 PHLIRAVRGAGQIVTWVCDPMHGNTIKAPCGLKTRAFDAILAEVRAFYDVHEQEGTLPG-----------TECVGGSRTITYDDRQTRYHTHCDPRLNASQSLELAFIIAERLRK 483          
The following BLAST results are available for this feature:
BLAST of CF834381 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
AROF_TOBAC3.522e-6194.07Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROG_SOLLC1.748e-6092.37Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROF_SOLTU1.748e-6092.37Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROG_ORYSJ1.253e-5889.83Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROF_ARATH2.362e-5789.74Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROF_ORYSJ2.000e-5688.14Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROG_SOLTU7.599e-5686.32Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROF_SOLLC3.193e-5484.62Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROG_ARATH2.703e-5383.05Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROF_CATRO1.487e-4373.91Probable phospho-2-dehydro-3-deoxyheptonate aldola... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05H01_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834381 ID=CF834381; Name=CF834381; organism=Citrus sinensis; type=EST; length=572bp
TTCCTCATCTCCTTTTGGCAGTCCGCCGCTCTGGCCAAATTGTTACATGG
GCCTTTGACCCTATGCATGGTAACACCATCAAGGCTCCCTGCGGCCTGAA
AACTCGTCCCTTCGATTCTATCAGGGCTGAAGTGAGAGCATTCTTTGATG
TGCATGAGCAAGAAGGAAGTCACCCGGGAGGAGTACATTTGGAGATGACA
GGCCAGAATGTGACAGAGTGCATCGGTGGGTCAAGAACAGTGACATTCGA
CGACTTGAGTTCACGCTACCACACCCACTGTGACCCTAGGCTTAATGCTT
CACAGTCACTTGAGCTTGCCTTCATCATTGCCGAGCGCCTCACAAAGAGG
AGGATTAGCTCACAGCAACCTCTTGCCTCTTCGTCTCTCCTGTAGAATGG
CCTGAGTACTGCTGGCATATATTATTATTTTTCTTGAAGTTTAGCAGCTG
TGCTAGTATTTTTAATTTTGGTTTTTTGATTTAATTTATGTCATGTACTG
AATGTGTATATTAAAAGGACATGATGGCTTGAGACTTAAGGAACAAAGGA
ATAAAAAATATGGGATTTATGA
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