CF834458

Overview
NameCF834458
Unique NameCF834458
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length652
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1735 contig Csv1_Contig1735:15..666. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834458 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 8.663e-20
Identity = 64/186 (34.41%), Postives = 94/186 (50.54%), Query Frame = 3
Query:   33 MKTSLIAQLSFLILALATKAQ---LGTS*SEPILHVYGNKVQSNLEYKLLKVKNGTSGGFNIHGGTNGES-PLDVVQLSSPTERDHYVRLLPFDNST-VVRESTDLNL-----------IEPVWTVGNYNASLGKWILTTGGIVGHPGAKKLLNWFNLKKASVSIYNLVHCTSVCDSCVKLCNKVG 542
            MKT+    L  L+ A  +K+    +  + + P+L   G+++Q+ ++Y +L   +G  GG    G   G+S P  VVQ  S  +    V     D+   VVR STD+N+              VW + NY+ S GKW +TT G+ G PG   L +WF ++KA V  Y    C SVCDSC  LC+ +G
Sbjct:    1 MKTATAVVL--LLFAFTSKSYFFGVANAANSPVLDTDGDELQTGVQYYVLSSISGAGGGGLALGRATGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEFVPIRDRLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGVLGYKFRFCPSVCDSCTTLCSDIG 184          
BLAST of CF834458 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 84.7297 bits (208), Expect = 4.449e-16
Identity = 60/194 (30.93%), Postives = 90/194 (46.39%), Query Frame = 3
Query:   33 MKTSLIAQLSFL----ILALATKAQLGTS*S--EPILHVYGNKVQSNLEYKLLKVKNGTSGGFNIHGGT-NGE--SPLDVVQLSSPTERDHYVRLLPFD-NSTVVRESTDLNL-----------IEPVWTVGNYNASLGKWILTTGGIVGHPGAKKLLNWFNLKK-ASVSIYNLVHCTSVCDSCVKLCNKVGIF 548
            MK   +  LSF     +LA A    L  + S   P+L + G K+++   Y ++ V     GG  +   T NG    P  VVQ     + D  +   P +    VVR STDLN+              VW +  Y+ S G++ +T GG+ G+PG + + +WF +++      Y LV C +VC SC   C  VGI+
Sbjct:    1 MKELTMLSLSFFFVSALLAAAANPLLSAADSAPNPVLDIDGEKLRTGTNYYIVPVLRDHGGGLTVSATTPNGTFVCPPRVVQTRKEVDHDRPLAFFPENPKEDVVRVSTDLNINFSAFMPCRWTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEEFCGSGFYKLVFCPTVCGSCKVKCGDVGIY 194          
The following BLAST results are available for this feature:
BLAST of CF834458 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ASP_THECC8.663e-2034.4121 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU4.449e-1630.93Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_05J03_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05J03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834458 ID=CF834458; Name=CF834458; organism=Citrus sinensis; type=EST; length=652bp
GAAGTTAGCTCCCTTTCAAAAAAGTAAAGAAAATGAAGACTTCATTAATA
GCACAACTCTCCTTCCTTATCCTTGCCTTGGCCACAAAAGCTCAGTTGGG
CACCTCATAATCTGAACCAATCTTACATGTCTATGGCAACAAGGTCCAAT
CCAACCTCGAGTATAAGCTTCTCAAAGTCAAAAATGGCACTAGTGGTGGA
TTCAATATACATGGAGGCACAAATGGAGAGAGTCCGTTGGACGTTGTCCA
ACTAAGTTCTCCTACGGAAAGGGATCATTATGTAAGATTATTACCGTTTG
ACAATTCTACAGTTGTCCGGGAATCCACTGATCTCAACTTGATAGAACCA
GTATGGACAGTTGGGAACTATAATGCTTCATTAGGAAAATGGATTCTAAC
AACCGGAGGAATCGTCGGCCACCCAGGAGCTAAAAAGTTGCTAAATTGGT
TTAATCTTAAAAAAGCTAGTGTCAGTATATACAATCTTGTTCATTGTACA
TCTGTTTGCGATTCTTGCGTTAAACTCTGTAACAAAGTCGGCATCTTTTA
TGTGGACGGCGTTCGACGTCTGGTTCTGGATCGTGATGATGATCAGCCTC
TCCGGTTGGTGTTATTTCCAGCTCCTAATCCTTCAAGATCCTCTATGTAA
TG
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