CF834467

Overview
NameCF834467
Unique NameCF834467
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length738
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834467 vs. ExPASy Swiss-Prot
Match: DRL42_ARATH (Probable disease resistance protein At5g66900 OS=Arabidopsis thaliana GN=At5g66900 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.605e-39
Identity = 91/184 (49.46%), Postives = 122/184 (66.30%), Query Frame = -1
Query:  196 QKVSWVMCNVGQVVGNST-FHFSDAFPNLLEIDIDYCNDLMELPDGLCDIVSIKKLRITNCHKLSILPEGIGKLVNLQMLTLASCTDLSALPDTIGNLSNLNFLDISECLNIQELPEQIGELCSLKTLCLKGCSIFEPPSSILNLENLEVVKCDEETAYQWEYFQLGQAKFRI--EVIQEDINL 738
            +K+S VMC+ G+V  ++     S+A   L EIDIDYC DL ELP  + +IVS+K L ITNC+KLS LPE IG L  L++L L S  +LS LP+    LSNL FLDIS CL +++LP++IG+L +LK + ++ CS  E P S+ NLENLE VKCDEET   WE  +      R+  E I+ ++NL
Sbjct:  623 KKLSLVMCSFGEVFYDTEDIVVSNALSKLQEIDIDYCYDLDELPYWISEIVSLKTLSITNCNKLSQLPEAIGNLSRLEVLRLCSSMNLSELPEATEGLSNLRFLDISHCLGLRKLPQEIGKLQNLKKISMRKCSGCELPESVTNLENLE-VKCDEETGLLWERLKPKMRNLRVQEEEIEHNLNL 805          
BLAST of CF834467 vs. ExPASy Swiss-Prot
Match: DRL43_ARATH (Probable disease resistance protein At5g66910 OS=Arabidopsis thaliana GN=At5g66910 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.282e-36
Identity = 84/182 (46.15%), Postives = 115/182 (63.19%), Query Frame = -1
Query:  196 QKVSWVMCNVGQVVGNST-FHFSDAFPNLLEIDIDYCNDLMELPDGLCDIVSIKKLRITNCHKLSILPEGIGKLVNLQMLTLASCTDLSALPDTIGNLSNLNFLDISECLNIQELPEQIGELCSLKTLCLKGCSIFEPPSSILNLENLEVVKCDEETAYQWEYFQLGQAKFRIEVIQEDINL 738
            +K+S+ MC+ G+V  ++     S A  NL EIDIDYC DL ELP  + ++VS+K L ITNC+KLS LPE IG L  L++L + SC +LS LP+    LSNL  LDIS CL +++LP++IG+L  L+ + ++ CS  E P S+  LENLE VKCDE T   WE         R+   + + NL
Sbjct:  629 KKLSFFMCSFGEVFYDTEDIDVSKALSNLQEIDIDYCYDLDELPYWIPEVVSLKTLSITNCNKLSQLPEAIGNLSRLEVLRMCSCMNLSELPEATERLSNLRSLDISHCLGLRKLPQEIGKLQKLENISMRKCSGCELPDSVRYLENLE-VKCDEVTGLLWERLMPEMRNLRVHTEETEHNL 809          
BLAST of CF834467 vs. ExPASy Swiss-Prot
Match: DRL30_ARATH (Probable disease resistance protein At5g04720 OS=Arabidopsis thaliana GN=At5g04720 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.502e-32
Identity = 64/183 (34.97%), Postives = 110/183 (60.11%), Query Frame = -1
Query:  187 KVSWVMCNVGQVVGNSTFHFSDAFPNLLEIDIDYCNDLMELPDGLCDIVSIKKLRITNCHKLSILPEGIGKLVNLQMLTLASCTDLSALPDTIGNLSNLNFLDISECLNIQELPEQIGELCSLKTLCLKGCSIFEPPSSILNLENLEVVKCDEETAYQWEYFQLGQAKFRIEVIQEDINLYWL 735
            K+S + C +   +  +    +  FP L ++ ID+C+DL+ELP  +C I S+  + ITNC ++  LP+ + KL  LQ+L L +C +L++LP  I  L  L ++DIS+C+++  LPE+IG++ +L+ +  + CS+   P+S++ L +L  V CD E  + WE  Q   A  R+E  ++  +  WL
Sbjct:  627 KLSLIFCKINTSLDQTELDIAQIFPKLSDLTIDHCDDLLELPSTICGITSLNSISITNCPRIKELPKNLSKLKALQLLRLYACHELNSLPVEICELPRLKYVDISQCVSLSSLPEKIGKVKTLEKIDTRECSLSSIPNSVVLLTSLRHVICDREALWMWEKVQKAVAGLRVEAAEKSFSRDWL 809          
BLAST of CF834467 vs. ExPASy Swiss-Prot
Match: DRL29_ARATH (Probable disease resistance protein At4g33300 OS=Arabidopsis thaliana GN=At4g33300 PE=2 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 7.280e-32
Identity = 65/183 (35.52%), Postives = 110/183 (60.11%), Query Frame = -1
Query:  187 KVSWVMCNVGQVVGNSTFHFSDAFPNLLEIDIDYCNDLMELPDGLCDIVSIKKLRITNCHKLSILPEGIGKLVNLQMLTLASCTDLSALPDTIGNLSNLNFLDISECLNIQELPEQIGELCSLKTLCLKGCSIFEPPSSILNLENLEVVKCDEETAYQWEYFQLGQAKFRIEVIQEDINLYWL 735
            K+S ++C + +    +    +D FP L ++ ID+C+DL+ LP  +C + S+  L ITNC +L  LP+ + KL  L++L L +C +L  LP  I  L  L +LDIS+C+++  LPE+IG+L  L+ + ++ C   + PSS ++L++L  V CD + A+ WE  +      +IE  ++  +L WL
Sbjct:  648 KMSLILCKINKSFDQTGLDVADIFPKLGDLTIDHCDDLVALPSSICGLTSLSCLSITNCPRLGELPKNLSKLQALEILRLYACPELKTLPGEICELPGLKYLDISQCVSLSCLPEEIGKLKKLEKIDMRECCFSDRPSSAVSLKSLRHVICDTDVAFMWEEVEKAVPGLKIEAAEKCFSLDWL 830          
BLAST of CF834467 vs. ExPASy Swiss-Prot
Match: DRL41_ARATH (Probable disease resistance protein At5g66890 OS=Arabidopsis thaliana GN=At5g66890 PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.719e-31
Identity = 78/186 (41.94%), Postives = 112/186 (60.22%), Query Frame = -1
Query:  187 QKVSWVMCNVGQVVGNSTFHFSDAFPNLLEIDIDYCNDLMELPDGLCDIVSIKKLRITNCHKLSILPEGIGKLVNLQMLTLASCTDLSALPDTIGNLSNLNFLDISECLNIQELPEQIGELCSLKTLCLKGCSIFEPPSSILNLENLEVVKCDEETAYQWEYFQLGQAKFRI--EVIQEDINLYWL 738
            +K+S   C+V   + N     S+   +L EI+IDYC +L ELP  +  +VS+KKL +TNC+KL  + E IG L +L+ L L+SC  L  LP+TI  L NL FLD+S    ++ LP +IG+L  L+ + +K C   E P S+ NLENLE VKCDE+TA+ W+  +       I  E  + ++NL  L
Sbjct:  231 EKLSLWFCHVVDAL-NELEDVSETLQSLQEIEIDYCYNLDELPYWISQVVSLKKLSVTNCNKLCRVIEAIGDLRDLETLRLSSCASLLELPETIDRLDNLRFLDVSGGFQLKNLPLEIGKLKKLEKISMKDCYRCELPDSVKNLENLE-VKCDEDTAFLWKILKPEMKNLTITEEKTEHNLNLLQL 414          
BLAST of CF834467 vs. ExPASy Swiss-Prot
Match: DRL39_ARATH (Putative disease resistance protein At5g47280 OS=Arabidopsis thaliana GN=At5g47280 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.373e-30
Identity = 65/182 (35.71%), Postives = 103/182 (56.59%), Query Frame = -1
Query:  190 KVSWVMCNVGQVVGNSTFHFSDAFPNLLEIDIDYCNDLMELPDGLCDIVSIKKLRITNCHKLSILPEGIGKLVNLQMLTLASCTDLSALPDTIGNLSNLNFLDISECLNIQELPEQIGELCSLKTLCLKGCSIFEPPSSILNLENLEVVKCDEETAYQWEYFQLGQAKFRIEVIQEDINLYW 735
            K+  ++C +      +    +  FP L +I IDYC+DL ELP  +C I S+  + ITNC  +  LP+ I KL  LQ+L L +C +L +LP  I  L  L ++DIS CL++  LPE+IG + +L+ + ++ CS+   PSS ++L +L  V C  E  + W+  +      RIE  ++  N+ W
Sbjct:  439 KLYLIICKINNSFDQTAIDIAQIFPKLTDITIDYCDDLAELPSTICGITSLNSISITNCPNIKELPKNISKLQALQLLRLYACPELKSLPVEICELPRLVYVDISHCLSLSSLPEKIGNVRTLEKIDMRECSLSSIPSSAVSLTSLCYVTCYREALWMWKEVEKAVPGLRIEATEKWFNMTW 620          
BLAST of CF834467 vs. ExPASy Swiss-Prot
Match: ADR1_ARATH (Disease resistance protein ADR1 OS=Arabidopsis thaliana GN=ADR1 PE=2 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 2.424e-27
Identity = 64/183 (34.97%), Postives = 108/183 (59.02%), Query Frame = -1
Query:  187 KVSWVMCNVGQVVGNSTFHFSDAFPNLLEIDIDYCNDLMELPDGLCDIVSIKKLRITNCHKLSILPEGIGKLVNLQMLTLASCTDLSALPDTIGNLSNLNFLDISECLNIQELPEQIGELCSLKTLCLKGCSIFEPPSSILNLENLEVVKCDEETAYQWEYFQLGQAKFRIEVIQEDINLYWL 735
            K+  + C V      ++F  S  FP+L ++ ID+C+DL+EL   +  I S+  L ITNC ++  LP+ +  + +L+ L L +C +L +LP  +  L  L ++DIS+C+++  LPE+ G+L SL+ + ++ CS+   PSS+  L +L  V CDEET+  WE  +    +  IEV ++   + WL
Sbjct:  604 KIHLIFCKVKNSFVQTSFDISKIFPSLSDLTIDHCDDLLELKS-IFGITSLNSLSITNCPRILELPKNLSNVQSLERLRLYACPELISLPVEVCELPCLKYVDISQCVSLVSLPEKFGKLGSLEKIDMRECSLLGLPSSVAALVSLRHVICDEETSSMWEMVKKVVPELCIEVAKKCFTVDWL 785          
BLAST of CF834467 vs. ExPASy Swiss-Prot
Match: DRL25_ARATH (Putative disease resistance protein At4g19050 OS=Arabidopsis thaliana GN=At4g19050 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.569e-13
Identity = 46/120 (38.33%), Postives = 74/120 (61.67%), Query Frame = -1
Query:  298 LLEIDIDYCNDLMELPDGLCDIVSIKKLRITNCHKLSILPEGIGKLVNLQMLTLASCTDLSALPDTIGNLSNLNFLDISECLNIQELPEQIGELCSLKTLCLKGCSIFEPPSSILNLENL 657
            L E+++   N L ELPD + ++ ++K+L I  C KL  LP  + KL NL++  ++ CT+L  +  +  NLS L+ +++SE  N+ ELP +I EL +LK L L+ CS  +   ++ NLE L
Sbjct:  751 LHEVNLSETN-LSELPDKISELSNLKELIIRKCSKLKTLPN-LEKLTNLEIFDVSGCTELETIEGSFENLSCLHKVNLSE-TNLGELPNKISELSNLKELILRNCSKLK---ALPNLEKL 864          

HSP 2 Score: 70.4774 bits (171), Expect = 1.093e-11
Identity = 39/111 (35.14%), Postives = 67/111 (60.36%), Query Frame = -1
Query:  292 LMELPDGLCDIVSIKKLRITNCHKLSILPEGIGKLVNLQMLTLASCTDLSALPDTIGNLSNLNFLDISECLNIQELPEQIGELCSLKTLCLKGCSIFEPPSSILNLENLEV 624
            L EL D + D+V++ KL + NC  +  LP  I KL +L++  ++ C  L  +  + G +S L+ +++SE  N+ ELP++I EL +LK L ++ CS  +   ++  L NLE+
Sbjct:  691 LPELADTIADVVNLNKLLLRNCSLIEELPS-IEKLTHLEVFDVSGCIKLKNINGSFGEMSYLHEVNLSET-NLSELPDKISELSNLKELIIRKCSKLKTLPNLEKLTNLEI 799          
The following BLAST results are available for this feature:
BLAST of CF834467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
DRL42_ARATH3.605e-3949.46Probable disease resistance protein At5g66900 OS=A... [more]
DRL43_ARATH1.282e-3646.15Probable disease resistance protein At5g66910 OS=A... [more]
DRL30_ARATH2.502e-3234.97Probable disease resistance protein At5g04720 OS=A... [more]
DRL29_ARATH7.280e-3235.52Probable disease resistance protein At4g33300 OS=A... [more]
DRL41_ARATH4.719e-3141.94Probable disease resistance protein At5g66890 OS=A... [more]
DRL39_ARATH1.373e-3035.71Putative disease resistance protein At5g47280 OS=A... [more]
ADR1_ARATH2.424e-2734.97Disease resistance protein ADR1 OS=Arabidopsis tha... [more]
DRL25_ARATH7.569e-1338.33Putative disease resistance protein At4g19050 OS=A... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_05J11_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05J11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834467 ID=CF834467; Name=CF834467; organism=Citrus sinensis; type=EST; length=738bp
TTTTTTTTTTTTTTTTTAATCTTGATTTTGAGAACACACTTTATTCCCAT
AGAGAAAAAAGATTTATCTCGAGTCATAAAACAACAGCCTATACTACTGT
TGTGAAACAGAAAAGGAAAGTTCTTAAAGACTAATTACATTTCAATTGAG
CTGCAGGGAAATTTGTCTTCAAAGATGAGGATTGTGAAGCCAATATAAGT
TGATATCTTCTTGAATCACTTCTATCCTAAATTTTGCCTGTCCAAGCTGG
AAATATTCCCATTGATAGGCTGTCTCTTCATCACATTTCACTACTTCTAA
ATTCTCAAGATTCAAAATTGATGAGGGCGGCTCAAAAATAGAGCAACCTT
TCAAGCAAAGTGTCTTTAAACTGCACAACTCACCAATCTGTTCTGGCAAT
TCTTGGATGTTCAGACATTCAGATATATCCAGAAAGTTTAAATTGGACAG
GTTTCCAATTGTGTCTGGTAATGCTGACAGATCAGTGCATGAAGCAAGCG
TTAGCATTTGTAAGTTCACCAGCTTACCAATCCCCTCAGGTAGTATAGAC
AGCTTATGGCAGTTGGTGATCCGGAGCTTCTTTATGGAGACAATATCACA
TAACCCATCAGGCAACTCCATGAGATCATTGCAATAATCAATATCGATCT
CCAAGAGATTTGGAAATGCGTCAGAAAAATGAAAGGTAGAATTCCCAACA
ACCTGACCAACATTGCACATAACCCAGGATACTTTTTG
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