CF834468

Overview
NameCF834468
Unique NameCF834468
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length705
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1072 contig Csv1_Contig1072:1..705. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834468 vs. ExPASy Swiss-Prot
Match: DRL42_ARATH (Probable disease resistance protein At5g66900 OS=Arabidopsis thaliana GN=At5g66900 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.140e-39
Identity = 92/234 (39.32%), Postives = 136/234 (58.12%), Query Frame = 2
Query:    5 LKPFNDEAARTLFRYSPYLQDGNSYIPDENLVNKILRACKGCPLALTVVGGSLCGKHPAIWQKRVKEWTQDVSVFHSN-KEILSCLERSLDALNNEVKECYMDLCSFPEDQRIPITALVDMWMELYELVDELFAIANLHELSNLNLANCVATRKYASDDSCYNDHFVMQHDLLRELAIYQSTLEPIKQRKRLIIDTSGNNFPEWWMDQKQHPLNASLLSISTDENFSSNWYDME 703
            LKP  D+ AR L  +        S    E+L+ KIL+ C G P+ + VVG SL G+    W+ +V+ W++   +       +L CL+ S DAL+  +KEC++D+ SF EDQ+I  + ++DMW+ELY     +  +  L +L++ NL   V       +D  YND  V QHD+LRELAI QS  +   +RKRL ++   N FP+W +    + +NASLLSISTD+ FSS W +M+
Sbjct:  316 LKPLEDDDARALLIHWASRPCNTSPDEYEDLLQKILKRCNGFPIVIEVVGVSLKGRSLNTWKGQVESWSEGEKILGKPYPTVLECLQPSFDALDPNLKECFLDMGSFLEDQKIRASVIIDMWVELYGKGSSILYM-YLEDLASQNLLKLVPLGTNEHEDGFYNDFLVTQHDILRELAICQSEFKENLERKRLNLEILENTFPDWCL----NTINASLLSISTDDLFSSKWLEMD 544          
BLAST of CF834468 vs. ExPASy Swiss-Prot
Match: DRL43_ARATH (Probable disease resistance protein At5g66910 OS=Arabidopsis thaliana GN=At5g66910 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 6.919e-37
Identity = 95/240 (39.58%), Postives = 143/240 (59.58%), Query Frame = 2
Query:    5 LKPFNDEAARTLFRY--SPYLQDGNSYIPDE--NLVNKILRACKGCPLALTVVGGSLCGKHPAIWQKRVKEWTQDVSVF-HSNKEILSCLERSLDALNNEVKECYMDLCSFPEDQRIPITALVDMWMELYELVDELFA--IANLHELSNLNLANCVATRKYASDDSCYNDHFVMQHDLLRELAIYQSTLEPIKQRKRLIIDTSGNNFPEWWMDQKQHPLNASLLSISTDENFSSNWYDME 703
            L P   E AR+L     SP L       PDE  +L+ KIL+ C G PL + VVG SL G+   +W+ +V+ W++  ++  ++N  +   L+ S + L   +KEC+MD+ SF +DQ+I  + ++D+WMELY          +  L+EL++ NL   V       +D  YN+  V QH++LRELAI+QS LEPI QRK+L ++   +NFP+  ++Q   P+NA LLSI TD+ FSS W +M+
Sbjct:  318 LVPLKYEYARSLLIQWASPPLHTS----PDEYEDLLQKILKRCNGFPLVIEVVGISLKGQALYLWKGQVESWSEGETILGNANPTVRQRLQPSFNVLKPHLKECFMDMGSFLQDQKIRASLIIDIWMELYGRGSSSTNKFMLYLNELASQNLLKLVHLGTNKREDGFYNELLVTQHNILRELAIFQSELEPIMQRKKLNLEIREDNFPDECLNQ---PINARLLSIYTDDLFSSKWLEMD 550          
BLAST of CF834468 vs. ExPASy Swiss-Prot
Match: ADR1_ARATH (Disease resistance protein ADR1 OS=Arabidopsis thaliana GN=ADR1 PE=2 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 4.066e-29
Identity = 65/204 (31.86%), Postives = 119/204 (58.33%), Query Frame = 2
Query:   95 LVNKILRACKGCPLALTVVGGSLCGKHPAIWQKRVKEWTQDVSVFHSNKE-ILSCLERSLDALNNEVKECYMDLCSFPEDQRIPITALVDMWMELYELVDELFAIANLHELSNLNLANCVATRKYASDDSCYNDHFVMQHDLLRELAIYQSTLEPIKQRKRLIIDTSGNNFPEWWMDQKQHPLNASLLSISTDENFSSNWYDME 703
            LV +++  CKG PL+L V+G SL  K    W+  VK   +  +   +++  + + +E SL+ L+ ++++C++D+ +FPED++IP+  L  +W+E ++ +DE  A + +  L++ NL   V   ++      Y D FV QHD+LR+LA++ S    + +R+RL++  +    P  W   K  P +A ++S+ T E    NW+DM+
Sbjct:  322 LVKQVVDECKGLPLSLKVLGASLKNKPERYWEGVVKRLLRGEAADETHESRVFAHMEESLENLDPKIRDCFLDMGAFPEDKKIPLDLLTSVWVERHD-IDEETAFSFVLRLADKNLLTIVNNPRFGDVHIGYYDVFVTQHDVLRDLALHMSNRVDVNRRERLLMPKTEPVLPREWEKNKDEPFDAKIVSLHTGEMDEMNWFDMD 524          
BLAST of CF834468 vs. ExPASy Swiss-Prot
Match: DRL29_ARATH (Probable disease resistance protein At4g33300 OS=Arabidopsis thaliana GN=At4g33300 PE=2 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 5.871e-28
Identity = 71/201 (35.32%), Postives = 114/201 (56.72%), Query Frame = 2
Query:  104 KILRACKGCPLALTVVGGSLCGKHPAIWQKRVKEWTQDVSVFHSNKE-ILSCLERSLDALNNEVKECYMDLCSFPEDQRIPITALVDMWMELYELVDELFAIANLHELSNLNLANCVATRKYASDDSCYNDHFVMQHDLLRELAIYQSTLEPIKQRKRLIIDTSGNNFPEWWMDQKQHPLNASLLSISTDENFSSNWYDME 703
            ++   CKG PLAL V G SL GK    W+  ++  ++      S++  +L  +E SLD L+   K+C++DL +FPED++IP+  L+++W+EL++ +DE  A A L +LS+ NL       +  S  + + D FV QHD+LR+LA++ S    + +RKRL++     + P  W         A ++SI T E     W+DME
Sbjct:  369 QVANECKGLPLALKVTGASLNGKPEMYWKGVLQRLSKGEPADDSHESRLLRQMEASLDNLDQTTKDCFLDLGAFPEDRKIPLDVLINIWIELHD-IDEGNAFAILVDLSHKNLLTLGKDPRLGSLYASHYDIFVTQHDVLRDLALHLSNAGKVNRRKRLLMPKRELDLPGDWERNNDEHYIAQIVSIHTGEMNEMQWFDME 568          
BLAST of CF834468 vs. ExPASy Swiss-Prot
Match: DRL39_ARATH (Putative disease resistance protein At5g47280 OS=Arabidopsis thaliana GN=At5g47280 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.805e-27
Identity = 69/235 (29.36%), Postives = 130/235 (55.32%), Query Frame = 2
Query:    2 DLKPFNDEAARTLFRYSPYLQDGNSYIPDENLVNKILRACKGCPLALTVVGGSLCGKHPAIWQKRVKEWTQDVSVFHSNK-EILSCLERSLDALNNEVKECYMDLCSFPEDQRIPITALVDMWMELYELVDELFAIANLHELSNLNLANCVATRKYASDDSCYNDHFVMQHDLLRELAIYQSTLEPIKQRKRLIIDTSGNNFPEWWMDQKQHPLNASLLSISTDENFSSNWYDME 703
            D++  N+  A +LF  S + Q        ++LV +++   KG PL+L V+G SL  +    W   V+  ++   V  +++ ++ + +E +L+ L+ + KEC++D+ +FPE ++IP+  L++M +++++L D   A   L +L+N NL   V    + +  + Y D FV QHD+LR++A++ +    + +R RL++       P  W      P NA ++SI T E    +W+DM+
Sbjct:  126 DVELLNEHDATSLFCLSAFNQKSVPSGFSKSLVKQVVGESKGLPLSLKVLGASLNDRPETYWAIAVERLSRGEPVDETHESKVFAQIEATLENLDPKTKECFLDMGAFPEGKKIPVDVLINMLVKIHDLEDAA-AFDVLVDLANRNLLTLVKDPTFVAMGTSYYDIFVTQHDVLRDVALHLTNRGKVSRRDRLLMPKRETMLPSEWERSNDEPYNARVVSIHTGEMTEMDWFDMD 359          
BLAST of CF834468 vs. ExPASy Swiss-Prot
Match: DRL30_ARATH (Probable disease resistance protein At5g04720 OS=Arabidopsis thaliana GN=At5g04720 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.805e-27
Identity = 70/235 (29.79%), Postives = 129/235 (54.89%), Query Frame = 2
Query:    2 DLKPFNDEAARTLFRYSPYLQDGNSYIPDENLVNKILRACKGCPLALTVVGGSLCGKHPAIWQKRVKEWTQDVSVFHSNKE-ILSCLERSLDALNNEVKECYMDLCSFPEDQRIPITALVDMWMELYELVDELFAIANLHELSNLNLANCVATRKYASDDSCYNDHFVMQHDLLRELAIYQSTLEPIKQRKRLIIDTSGNNFPEWWMDQKQHPLNASLLSISTDENFSSNWYDME 703
            D++  N+  A  LF  S + Q        ++LV +++  CKG PL+L V+G SL  +    W+  V+  ++      +++  + + +E +L+ L+ + ++C++ L +FPED++IP+  L+++ +EL++L D   A A + +L+N NL   V   ++    + Y D FV QHD+LR++A+  S    +  R+RL++    +  P  W      P  A ++SI T E    +W+DME
Sbjct:  314 DVELLNEHEATALFCLSVFNQKLVPSGFSQSLVKQVVGECKGLPLSLKVIGASLKERPEKYWEGAVERLSRGEPADETHESRVFAQIEATLENLDPKTRDCFLVLGAFPEDKKIPLDVLINVLVELHDLEDAT-AFAVIVDLANRNLLTLVKDPRFGHMYTSYYDIFVTQHDVLRDVALRLSNHGKVNNRERLLMPKRESMLPREWERNNDEPYKARVVSIHTGEMTQMDWFDME 547          
BLAST of CF834468 vs. ExPASy Swiss-Prot
Match: DRL41_ARATH (Probable disease resistance protein At5g66890 OS=Arabidopsis thaliana GN=At5g66890 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.267e-22
Identity = 58/150 (38.67%), Postives = 92/150 (61.33%), Query Frame = 2
Query:  263 RSLDALNNEVKECYMDLCSFPEDQRIPITALVDMWMELYELVDELFAIANLHELSNLNLANCVATRKYASDDSCYNDHFVMQHDLLRELAIYQSTLE--PIKQRKRLIIDTSGNNFPEWWMDQKQH-PLNASLLSISTDENFSSNWYDME 703
            +S DAL + ++EC++D+ SF EDQRI  + ++D+W   Y        + NL +L++ NL   +   +   +D  YN+  V Q ++LRE AI Q   E   I +RKRL ++   N FP W ++ KQ   +NASL SISTD++F+S+W++M+
Sbjct:    7 QSFDALPHNLRECFLDMASFLEDQRIIASTIIDLWSASYGKE----GMNNLQDLASRNLLKLLPIGRNEYEDGFYNELLVKQDNVLREFAINQCLKESSSIFERKRLNLEIQDNKFPNWCLNPKQPIVINASLFSISTDDSFASSWFEMD 152          
The following BLAST results are available for this feature:
BLAST of CF834468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
DRL42_ARATH1.140e-3939.32Probable disease resistance protein At5g66900 OS=A... [more]
DRL43_ARATH6.919e-3739.58Probable disease resistance protein At5g66910 OS=A... [more]
ADR1_ARATH4.066e-2931.86Disease resistance protein ADR1 OS=Arabidopsis tha... [more]
DRL29_ARATH5.871e-2835.32Probable disease resistance protein At4g33300 OS=A... [more]
DRL39_ARATH3.805e-2729.36Putative disease resistance protein At5g47280 OS=A... [more]
DRL30_ARATH3.805e-2729.79Probable disease resistance protein At5g04720 OS=A... [more]
DRL41_ARATH1.267e-2238.67Probable disease resistance protein At5g66890 OS=A... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_05J11_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05J11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834468 ID=CF834468; Name=CF834468; organism=Citrus sinensis; type=EST; length=705bp
TGATTTGAAACCCTTTAATGATGAAGCTGCAAGGACTCTTTTTCGTTATT
CACCATACCTACAAGATGGAAACTCATACATTCCAGACGAAAATCTTGTC
AATAAGATTTTGAGAGCCTGTAAGGGATGCCCGTTGGCCCTTACAGTGGT
CGGTGGATCACTGTGTGGGAAGCATCCAGCAATCTGGCAAAAAAGAGTGA
AGGAATGGACTCAAGATGTATCTGTTTTCCATTCCAACAAAGAAATACTT
TCTTGTCTTGAAAGGAGCTTGGATGCCTTAAATAATGAGGTCAAGGAATG
TTATATGGACCTATGTTCCTTTCCTGAGGACCAAAGGATTCCTATCACTG
CGCTTGTTGACATGTGGATGGAATTGTATGAACTGGTTGATGAACTATTT
GCCATTGCCAACCTCCATGAGCTGTCCAACCTAAATCTGGCTAATTGCGT
GGCCACAAGGAAATATGCAAGCGACGACAGCTGCTACAATGATCACTTTG
TAATGCAACATGATCTTCTCAGAGAGTTGGCTATCTATCAGAGCACATTA
GAGCCCATAAAACAGAGGAAACGACTAATTATAGACACGAGTGGAAACAA
TTTTCCCGAATGGTGGATGGATCAAAAGCAGCACCCCCTTAATGCCAGCC
TATTGTCAATCTCAACAGATGAAAACTTCTCATCTAATTGGTATGACATG
GAAGC
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