CF834474

Overview
NameCF834474
Unique NameCF834474
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length706
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9892 contig Csv1_Contig9892:140..845. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834474 vs. ExPASy Swiss-Prot
Match: CFI_EUSGR (Chalcone--flavonone isomerase OS=Eustoma grandiflorum GN=CHI PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.580e-15
Identity = 54/169 (31.95%), Postives = 84/169 (49.70%), Query Frame = -1
Query:  206 GHGLTDIEIHFLQIKFTAIGVYLDPEILSHLQ-QWKGKQGSSLAQDDDFFDALVSAPVEKFLRIVVIKEIKGSQYGVQLESAVRDRLAGADKYXXXXESALEKIVEFFQSKYFKK-DSVIAYHFPATSPTAEIVFTSEGKEDSKIKVENANVVEMIKKWYLGGARGVSP 706
            G G+  +EI    +KFTAIG+YLD   +  L  +WKGK    LA   DFF  +++ P EKF ++ +I  + G QY  ++      +   A  Y      A+EK ++ F+ + F   DS++  H P  S T       +  E S   +EN  + E + +  + G +GVSP
Sbjct:   34 GAGVRGLEIGGNFVKFTAIGIYLDETAIPWLAGKWKGKTAEELADSVDFFADIITGPFEKFTQVTLILPLTGQQYSGKVSENCTAQWKAAGVYTPADGKAIEKFLQVFEPQSFSPGDSILFMHSP-ESLTISFGKAGDIPETSNAVIENKKLSEAVIESVI-GEKGVSP 200          
BLAST of CF834474 vs. ExPASy Swiss-Prot
Match: CFI_GENTR (Chalcone--flavonone isomerase OS=Gentiana triflora GN=CHI PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.852e-14
Identity = 54/171 (31.58%), Postives = 88/171 (51.46%), Query Frame = -1
Query:  206 GHGLTDIEIHFLQIKFTAIGVYLDPEILSHLQ-QWKGKQGSSLAQDDDFFDALVSAPVEKFLRIVVIKEIKGSQYGVQLESAVRDRLAGADKYXXXXESALEKIVEFFQSKYFKK-DSVIAYHFPATSPTAEIVFTSEG--KEDSKIKVENANVVEMIKKWYLGGARGVSP 706
            G G+  +EI+   +KFTAIGVYL+   ++ L  +WKGK    L+   +FF  +++ P EKF ++ +I  + G QY  ++      +   A  Y      A+EK ++ FQ++ F   DS++  H P    +  I F   G   E S   +EN  + E + +  + G +GVSP
Sbjct:   36 GAGVRGLEINGNFVKFTAIGVYLEESGVAVLSGKWKGKTAEELSDSVEFFTDIITGPFEKFTQVTLILPVTGQQYSPKVAENCAAQWKAAGIYTDADGIAIEKFLQVFQTESFTPGDSILFTHSP---ESLTISFGKNGAIPEVSNAVIENKKLSEAVIESII-GEKGVSP 202          
BLAST of CF834474 vs. ExPASy Swiss-Prot
Match: CFI_CANGE (Chalcone--flavonone isomerase OS=Canna generalis GN=CHI PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.852e-14
Identity = 55/170 (32.35%), Postives = 82/170 (48.24%), Query Frame = -1
Query:  206 GHGLTDIEIHFLQIKFTAIGVYLDPEILSHL-QQWKGKQGSSLAQDDDFFDALVSAPVEKFLRIVVIKEIKGSQYGVQLESAVRDRLAGADKYXXXXESALEKIVEFFQSKYFKKDSVIAYHFPATSPTAEIVFTSEGK--EDSKIKVENANVVEMIKKWYLGGARGVSP 706
            G G   +EI    + FTAIGVYL+   +S L  +WKGK    LA + DFF  + + P EKF RI ++K + G QY  ++E         A  Y     +A+EK  E  +++ F   + I +    +  +  I F  EG   E     +E+  + E I +  + G  GVSP
Sbjct:   35 GAGERGLEIDRQFVVFTAIGVYLEDLAVSTLGPKWKGKTADDLAGNSDFFRDIFTGPFEKFTRITMVKPLSGQQYSEKVEENCVAHWKAAGTYTEAEAAAVEKFKEACKNETFPPGTSILFTHQVSPASLTITFWREGSMPETGNTVIESKALSEAILESII-GKHGVSP 203          
BLAST of CF834474 vs. ExPASy Swiss-Prot
Match: CFI_CAMSI (Chalcone--flavonone isomerase OS=Camellia sinensis GN=CHI PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 6.354e-14
Identity = 56/171 (32.75%), Postives = 81/171 (47.37%), Query Frame = -1
Query:  206 GHGLTDIEIHFLQIKFTAIGVYLDPEILSHLQ-QWKGKQGSSLAQDDDFFDALVSAPVEKFLRIVVIKEIKGSQYGVQLESAVRDRLAGADKYXXXXESALEKIVEFFQSKYFKK-DSVIAYHFPATSPTAEIVFTSEGK--EDSKIKVENANVVEMIKKWYLGGARGVSP 706
            G G   +EI    IKFTAIGVYL+   +  L  +WKGK    L    DFF  +VS P EKF ++ +I  + G QY  ++             Y      A+EK +E F+ + F    S++    P  S T  I F+ +G   E   + +EN  + E + +  + G  GVSP
Sbjct:   36 GAGERGLEIQGKFIKFTAIGVYLEDSAIPSLAVKWKGKTAEELTDSVDFFRDIVSGPFEKFTQVTMILPLTGQQYSEKVTENCVAYWKAVGTYTDAEAKAIEKFIEVFKDETFPPGGSILFTQSPLGSLT--IAFSKDGSLPETGTVVMENKQLSEAVLESII-GKHGVSP 203          
BLAST of CF834474 vs. ExPASy Swiss-Prot
Match: CFI_ALLCE (Chalcone--flavonone isomerase OS=Allium cepa GN=CHI PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.084e-13
Identity = 54/171 (31.58%), Postives = 85/171 (49.71%), Query Frame = -1
Query:  206 GHGLTDIEIHFLQIKFTAIGVYLDPEILSHL-QQWKGKQGSSLAQDDDFFDALVSAPVEKFLRIVVIKEIKGSQYGVQLESAVRDRLAGADKYXXXXESALEKIVEFFQSKYFKKDSVIAY-HFPATSPTAEIVFTSEG--KEDSKIKVENANVVEMIKKWYLGGARGVSP 706
            G G+  +EI    I FTAIG+YL+ + +  L  +WKGK G  LA   DFF  + + P EKF  + +I  + G QY  ++             Y     SA++K  + F+ + F   S I + H P  S T +I F+ +G   +D  + +EN  + + + +  + G  GVSP
Sbjct:   31 GAGVRGLEIGGKFIAFTAIGIYLETDSIPFLADKWKGKTGEELAGSLDFFRDICTGPFEKFTNVTMILPLTGEQYSEKVTENCVAYWKAIGIYTDAEASAVDKFKQAFKPESFPPGSSILFTHTP--SGTLKIAFSKDGSVSKDEGVLIENKALTQAVLESII-GEHGVSP 198          
BLAST of CF834474 vs. ExPASy Swiss-Prot
Match: CFI_VERHY (Chalcone--flavonone isomerase OS=Verbena hybrida GN=CHI PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.414e-13
Identity = 53/171 (30.99%), Postives = 86/171 (50.29%), Query Frame = -1
Query:  206 GHGLTDIEIHFLQIKFTAIGVYLDPEILSHLQ-QWKGKQGSSLAQDDDFFDALVSAPVEKFLRIVVIKEIKGSQYGVQLESAVRDRLAGADKYXXXXESALEKIVEFFQSKYFKKD-SVIAYHFPATSPTAEIVFTSEGK--EDSKIKVENANVVEMIKKWYLGGARGVSP 706
            G G+  +EI    IKFTAIGVYL+ + ++ L  +WKGK    +A   DFF  +V+ P EKF ++  I  + G QY  ++            K+    + A +K ++ F+++ F    S++    P  S T  I F+ +G   E     +EN  + E + +  + G +GVSP
Sbjct:   34 GAGVRGLEIEGKFIKFTAIGVYLENDAVTSLAAKWKGKTAEEVADSGDFFAEIVTGPFEKFTKVTTILPLTGQQYSEKVVENCVAYWKAIGKFTDAEDEATKKFLQVFKNEMFHPGASILFTQSPQGSLT--ISFSKDGSIPEKENAIIENKQLSEAVLESII-GKKGVSP 201          
BLAST of CF834474 vs. ExPASy Swiss-Prot
Match: CFI3_SOYBN (Chalcone--flavonone isomerase 3 OS=Glycine max GN=CHI3 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.153e-13
Identity = 51/172 (29.65%), Postives = 80/172 (46.51%), Query Frame = -1
Query:  206 GHGLTDIEIHFLQIKFTAIGVYLDPEILSHLQ-QWKGKQGSSLAQDDDFFDALVSAPVEKFLRIVVIKEIKGSQYGVQLESAVRDRLAGADKYXXXXESALEKIVEFFQSKYFKKDSVIAYHFPATSPTAEIVFTSEGKED----SKIKVENANVVEMIKKWYLGGARGVSP 706
            G G+  ++IH   +KFTAI VYL  + LS L  +WK K    L + D FF  +V+ P EKF+++ +IK + G QY  ++             Y      A++K +  F+   F   S I +     SP   +  +  G E     +   +EN  + E + +  + G  GVSP
Sbjct:   33 GAGVRGLQIHHAFVKFTAICVYLQYDALSFLSVKWKTKSTHQLTESDQFFSDIVTGPFEKFMQVTMIKPLTGQQYSEKVAENCVAIWRSLGIYTDSEAEAIDKFLSVFKDLTFPPGSSILF---TVSPNGSLTISFSGDETIPEVTSAVIENKLLSEAVLESMI-GKNGVSP 200          
BLAST of CF834474 vs. ExPASy Swiss-Prot
Match: CFI1_PETHY (Chalcone--flavonone isomerase A OS=Petunia hybrida GN=CHI1 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.153e-13
Identity = 53/173 (30.64%), Postives = 82/173 (47.40%), Query Frame = -1
Query:  206 GHGLTDIEIHFLQIKFTAIGVYLDPEILSHL-QQWKGKQGSSLAQDDDFFDALVSAPVEKFLRIVVIKEIKGSQYGVQLESAVRDRLAGADKYXXXXESALEKIVEFFQSKYFKKDSVIAYHFPATSPTAEIVFTSEGKEDS-----KIKVENANVVEMIKKWYLGGARGVSP 706
            G G   +EI    +KFTAIGVYL+   +  L ++WKGK    L    +FF  +V+ P EKF R+ +I  + G QY  ++         G   Y      A+EK ++ F+S+ F   + I +    T     ++  S  K+DS        +EN  + E + +  + G  GVSP
Sbjct:   34 GAGHRGLEIEGKFVKFTAIGVYLEESAIPFLAEKWKGKTPQELTDSVEFFRDVVTGPFEKFTRVTMILPLTGKQYSEKVAENCVAHWKGIGTYTDDEGRAIEKFLDVFRSETFPPGASIMF----TQSPLGLLTISFAKDDSVTGTANAVIENKQLSEAVLESII-GKHGVSP 201          
BLAST of CF834474 vs. ExPASy Swiss-Prot
Match: CFI3_PETHY (Chalcone--flavonone isomerase C OS=Petunia hybrida GN=CHI3 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.118e-13
Identity = 53/173 (30.64%), Postives = 81/173 (46.82%), Query Frame = -1
Query:  206 GHGLTDIEIHFLQIKFTAIGVYLDPEILSHL-QQWKGKQGSSLAQDDDFFDALVSAPVEKFLRIVVIKEIKGSQYGVQLESAVRDRLAGADKYXXXXESALEKIVEFFQSKYFKKDSVIAYHFPATSPTAEIVFTSEGKEDS-----KIKVENANVVEMIKKWYLGGARGVSP 706
            G G   +EI    +KFTAIGVYL+   +  L ++WKGK    L    +FF  +V+ P EKF R+  I  + G QY  ++         G   Y      A+EK ++ F+S+ F   + I +    T     ++  S  K+DS        +EN  + E + +  + G  GVSP
Sbjct:   34 GAGHRGLEIEGKFVKFTAIGVYLEESAIPFLAEKWKGKTPQELTDSVEFFRDVVTGPFEKFTRVTTILPLTGKQYSEKVAENCVAHWKGIGTYTDDEGRAIEKFLDVFRSETFPPGASIMF----TQSPLGLLTISFAKDDSVTGTANAVIENKQLSEAVLESII-GKHGVSP 201          
BLAST of CF834474 vs. ExPASy Swiss-Prot
Match: CFI2A_SOYBN (Chalcone--flavonone isomerase 2-A OS=Glycine max GN=CHI2-A PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.118e-13
Identity = 50/172 (29.07%), Postives = 80/172 (46.51%), Query Frame = -1
Query:  206 GHGLTDIEIHFLQIKFTAIGVYLDPEILSHLQ-QWKGKQGSSLAQDDDFFDALVSAPVEKFLRIVVIKEIKGSQYGVQLESAVRDRLAGADKYXXXXESALEKIVEFFQSKYFKKDSVIAYHFPATSPTAEIVFTSEGKED----SKIKVENANVVEMIKKWYLGGARGVSP 706
            G G+  ++IH   +KFTAI +YL  + LS L  +WK K    L + D FF  +V+ P EKF+++ +IK + G QY  ++             Y      A++K +  F+   F   S I +     SP   +  +  G E     +   +EN  + E + +  + G  GVSP
Sbjct:   33 GAGVRGLQIHHAFVKFTAICIYLQYDALSFLSVKWKTKSTHQLTESDQFFSDIVTGPFEKFMQVTMIKPLTGQQYSEKVAENCVAIWRSLGIYTDSEAEAIDKFLSVFKDLTFPPGSSILF---TVSPNGSLTISFSGDETIPEVTSAVIENKLLSEAVLESMI-GKNGVSP 200          
The following BLAST results are available for this feature:
BLAST of CF834474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
CFI_EUSGR2.580e-1531.95Chalcone--flavonone isomerase OS=Eustoma grandiflo... [more]
CFI_GENTR2.852e-1431.58Chalcone--flavonone isomerase OS=Gentiana triflora... [more]
CFI_CANGE2.852e-1432.35Chalcone--flavonone isomerase OS=Canna generalis G... [more]
CFI_CAMSI6.354e-1432.75Chalcone--flavonone isomerase OS=Camellia sinensis... [more]
CFI_ALLCE1.084e-1331.58Chalcone--flavonone isomerase OS=Allium cepa GN=CH... [more]
CFI_VERHY2.414e-1330.99Chalcone--flavonone isomerase OS=Verbena hybrida G... [more]
CFI3_SOYBN3.153e-1329.65Chalcone--flavonone isomerase 3 OS=Glycine max GN=... [more]
CFI1_PETHY3.153e-1330.64Chalcone--flavonone isomerase A OS=Petunia hybrida... [more]
CFI3_PETHY4.118e-1330.64Chalcone--flavonone isomerase C OS=Petunia hybrida... [more]
CFI2A_SOYBN4.118e-1329.07Chalcone--flavonone isomerase 2-A OS=Glycine max G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05J16_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05J16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834474 ID=CF834474; Name=CF834474; organism=Citrus sinensis; type=EST; length=706bp
CTTTTTTTTTTTTCTTGAAGGACCTTAGCAAAGCAAATTTTCATTAAAAT
AGAAGCATGGTTGCGGGGTAAACACGTCATTCAAATTGCACAAATTTACA
GCAATTCCAAAACCCAAGTGAAGAAGCACTTTTATTAGAAAGCGCAGAGC
TGCTTCATTTTGATAACTCAGCTGAGAGAGTATTGGCTAGAGATGATGTT
GTTGTAGGAGACACTCCCCTTGCTCCACCCAAGTACCATTTCTTGATCAT
CTCAACCACATTCGCATTCTCCACTTTGATTTTTGAGTCCTCCTTTCCTT
CACTTGTAAACACTATCTCAGCAGTAGGGGATGTTGCCGGAAAATGATAA
GCAATCACAGAGTCCTTCTTAAAATACTTGGATTGGAAGAATTCAACGAT
TTTCTCAAGGGCAGATTCTTCCTCTTCTTCATATTTGTCAGCTCCGGCCA
ATCTGTCCCTCACCGCACTTTCTAACTGAACCCCATATTGTGACCCCTTG
ATCTCCTTGATCACAACAATTCTCAAAAATTTCTCTACTGGAGCAGAGAC
AAGAGCATCAAAGAAGTCATCATCTTGTGCAAGGGAACTTCCCTGTTTGC
CCTTCCACTGTTGCAAGTGACTCAAAATTTCAGGATCCAAGTAGACTCCA
ATTGCCGTGAACTTGATTTGGAGAAAGTGTATCTCAATGTCTGTTAAACC
ATGACC
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