CF834482
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834482 vs. ExPASy Swiss-Prot
Match: GCSP_PEA (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Pisum sativum GN=GDCSP PE=1 SV=1) HSP 1 Score: 320.472 bits (820), Expect = 4.818e-87 Identity = 148/177 (83.62%), Postives = 162/177 (91.53%), Query Frame = 1 Query: 97 VAKRLEKHYPILFRGVNGTVAHEFIVDLRGLNNTAGIQPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRDCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLPAAHVAEEQAASTA 627 +AKRLE +YP+LFRGVNGTVAHEFI+DLRG NTAGI+PEDVAKRLMDYGFHGPTMSWPV GTLMIEPTESESK ELDR CDALISIR+EIA++E G AD+HNNVLKGAPHPPSLLM D WTKPYSREYAA+PA+WLR AKFWP TGRVDNVYGDRNL+CTLLPA+ EEQAA+TA Sbjct: 881 MAKRLESYYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVAGTLMIEPTESESKAELDRFCDALISIRKEIAEVEKGNADVHNNVLKGAPHPPSLLMADAWTKPYSREYAAFPAAWLRGAKFWPTTGRVDNVYGDRNLVCTLLPASQAVEEQAAATA 1057
BLAST of CF834482 vs. ExPASy Swiss-Prot
Match: GCSP_SOLTU (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Solanum tuberosum GN=GDCSP PE=2 SV=1) HSP 1 Score: 319.701 bits (818), Expect = 8.218e-87 Identity = 149/175 (85.14%), Postives = 160/175 (91.43%), Query Frame = 1 Query: 97 VAKRLEKHYPILFRGVNGTVAHEFIVDLRGLNNTAGIQPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRDCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLPAAHVAEEQAAS 621 +AKRLEKHYP+LFRGVNGT AHEFI+DLRG NTAGI+PEDVAKRL+DYGFHGPTMSWPVPGTLMIEPTESESK ELDR CDALISIREEIAQIE G DI+NNVLKGAPHPPS+LM D WTKPYSREYAAYPA WLR AKFWP TGRVDNVYGDRNLICTLLP + +AEE+AA+ Sbjct: 860 MAKRLEKHYPVLFRGVNGTCAHEFIIDLRGFKNTAGIEPEDVAKRLIDYGFHGPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREEIAQIEKGNVDINNNVLKGAPHPPSMLMADAWTKPYSREYAAYPAPWLRSAKFWPTTGRVDNVYGDRNLICTLLPVSEMAEEKAAT 1034
BLAST of CF834482 vs. ExPASy Swiss-Prot
Match: GCSP2_ARATH (Glycine dehydrogenase [decarboxylating] 2, mitochondrial OS=Arabidopsis thaliana GN=At4g33010 PE=1 SV=2) HSP 1 Score: 310.457 bits (794), Expect = 4.985e-84 Identity = 147/175 (84.00%), Postives = 156/175 (89.14%), Query Frame = 1 Query: 97 VAKRLEKHYPILFRGVNGTVAHEFIVDLRGLNNTAGIQPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRDCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLPAAHVAEEQAAS 621 +AKRLEKHYP+LFRGVNGTVAHEFI+DLRG NTAGI+PEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESK ELDR CDALISIREEIAQIE G AD+ NNVLKGAPHPPSLLM DTW KPYSREYAA+PA WLR +KFWP TGRVDNVYGDR L+CTLLP EEQ A+ Sbjct: 863 MAKRLEKHYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREEIAQIEKGNADVQNNVLKGAPHPPSLLMADTWKKPYSREYAAFPAPWLRSSKFWPTTGRVDNVYGDRKLVCTLLP----EEEQVAA 1033
BLAST of CF834482 vs. ExPASy Swiss-Prot
Match: GCSP1_ARATH (Glycine dehydrogenase [decarboxylating] 1, mitochondrial OS=Arabidopsis thaliana GN=GDCSP PE=1 SV=1) HSP 1 Score: 308.531 bits (789), Expect = 1.894e-83 Identity = 147/175 (84.00%), Postives = 157/175 (89.71%), Query Frame = 1 Query: 97 VAKRLEKHYPILFRGVNGTVAHEFIVDLRGLNNTAGIQPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRDCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLPAAHVAEEQAAS 621 +AKRLE HYP+LFRGVNGTVAHEFI+DLRG NTAGI+PEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESK ELDR CDALISIREEI+QIE G AD +NNVLKGAPHPPSLLM DTW KPYSREYAA+PA WLR +KFWP TGRVDNVYGDRNL+CTL PA EEQAA+ Sbjct: 869 MAKRLESHYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREEISQIEKGNADPNNNVLKGAPHPPSLLMADTWKKPYSREYAAFPAPWLRSSKFWPTTGRVDNVYGDRNLVCTLQPA---NEEQAAA 1040
BLAST of CF834482 vs. ExPASy Swiss-Prot
Match: GCSPA_FLAPR (Glycine dehydrogenase [decarboxylating] A, mitochondrial OS=Flaveria pringlei GN=GDCSPA PE=2 SV=1) HSP 1 Score: 299.286 bits (765), Expect = 1.149e-80 Identity = 144/177 (81.36%), Postives = 154/177 (87.01%), Query Frame = 1 Query: 97 VAKRLEKHYPILFRGVNGTVAHEFIVDLRGLNNTAGIQPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRDCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLPAAHVAEEQAASTA 627 +AKRLE HYPILFRGVNGTVAHEFIVDLR L TAGI+PEDVAKRL+DYGFHGPTMSWPVPGTLMIEPTESESK ELDR CDALISIR+EIA+IE G D++NNV+KGAPHPP LLM D WTKPYSREYAAYPA WLR AKFWP T RVDNVYGDRNLICTL P EE+A +TA Sbjct: 862 MAKRLENHYPILFRGVNGTVAHEFIVDLRPLKTTAGIEPEDVAKRLIDYGFHGPTMSWPVPGTLMIEPTESESKAELDRFCDALISIRQEIAEIEKGNVDLNNNVIKGAPHPPQLLMADKWTKPYSREYAAYPAPWLRAAKFWPTTCRVDNVYGDRNLICTLQPPQEY-EEKAEATA 1037
BLAST of CF834482 vs. ExPASy Swiss-Prot
Match: GCSP_FLAAN (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Flaveria anomala GN=GDCSP PE=3 SV=1) HSP 1 Score: 298.516 bits (763), Expect = 1.960e-80 Identity = 144/177 (81.36%), Postives = 153/177 (86.44%), Query Frame = 1 Query: 97 VAKRLEKHYPILFRGVNGTVAHEFIVDLRGLNNTAGIQPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRDCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLPAAHVAEEQAASTA 627 +AKRLE HYPILFRGVNGTVAHEFIVDLR L TAGI+PEDVAKRL+DYGFHGPTMSWPVPGTLMIEPTESESK ELDR CDALISIR+EIA+IE G D +NNV+KGAPHPP LLM D WTKPYSREYAAYPA WLR AKFWP T RVDNVYGDRNLICTL P EE+A +TA Sbjct: 859 MAKRLENHYPILFRGVNGTVAHEFIVDLRPLKTTAGIEPEDVAKRLIDYGFHGPTMSWPVPGTLMIEPTESESKAELDRFCDALISIRQEIAEIEKGNVDFNNNVIKGAPHPPQLLMADKWTKPYSREYAAYPAPWLRAAKFWPTTCRVDNVYGDRNLICTLQPPQEY-EEKAEATA 1034
BLAST of CF834482 vs. ExPASy Swiss-Prot
Match: GCSPB_FLAPR (Glycine dehydrogenase [decarboxylating] B, mitochondrial OS=Flaveria pringlei GN=GDCSPB PE=3 SV=1) HSP 1 Score: 298.516 bits (763), Expect = 1.960e-80 Identity = 144/177 (81.36%), Postives = 153/177 (86.44%), Query Frame = 1 Query: 97 VAKRLEKHYPILFRGVNGTVAHEFIVDLRGLNNTAGIQPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRDCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLPAAHVAEEQAASTA 627 +AKRLE HYPILFRGVNGTVAHEFIVDLR L TAGI+PEDVAKRL+DYGFHGPTMSWPVPGTLMIEPTESESK ELDR CDALISIR+EIA+IE G D +NNV+KGAPHPP LLM D WTKPYSREYAAYPA WLR AKFWP T RVDNVYGDRNLICTL P EE+A +TA Sbjct: 859 MAKRLENHYPILFRGVNGTVAHEFIVDLRPLKTTAGIEPEDVAKRLIDYGFHGPTMSWPVPGTLMIEPTESESKAELDRFCDALISIRQEIAEIEKGNVDFNNNVIKGAPHPPQLLMADKWTKPYSREYAAYPAPWLRAAKFWPTTCRVDNVYGDRNLICTLQPPQEY-EEKAEATA 1034
BLAST of CF834482 vs. ExPASy Swiss-Prot
Match: GCSP_FLATR (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Flaveria trinervia GN=GDCSPA PE=3 SV=1) HSP 1 Score: 298.13 bits (762), Expect = 2.560e-80 Identity = 144/177 (81.36%), Postives = 153/177 (86.44%), Query Frame = 1 Query: 97 VAKRLEKHYPILFRGVNGTVAHEFIVDLRGLNNTAGIQPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRDCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLPAAHVAEEQAASTA 627 +AKRLE HYPILFRGVNGTVAHEFIVDLR L TAGI+PEDVAKRL+DYGFHGPTMSWPVPGTLMIEPTESESK ELDR CDALISIR+EIA+IE G D +NNV+KGAPHPP LLM D WTKPYSREYAAYPA WLR AKFWP T RVDNVYGDRNLICTL P EE+A +TA Sbjct: 859 MAKRLENHYPILFRGVNGTVAHEFIVDLRPLKTTAGIEPEDVAKRLIDYGFHGPTMSWPVPGTLMIEPTESESKAELDRFCDALISIRQEIAEIEKGTVDFNNNVIKGAPHPPQLLMADKWTKPYSREYAAYPAPWLRAAKFWPTTCRVDNVYGDRNLICTLQPPQEY-EEKAEATA 1034
BLAST of CF834482 vs. ExPASy Swiss-Prot
Match: GCSP_THEEB (Glycine dehydrogenase [decarboxylating] OS=Thermosynechococcus elongatus (strain BP-1) GN=gcvP PE=3 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 2.671e-67 Identity = 106/161 (65.84%), Postives = 128/161 (79.50%), Query Frame = 1 Query: 97 VAKRLEKHYPILFRGVNGTVAHEFIVDLRGLNNTAGIQPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRDCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICT 579 +AKRLE +YP+L++G +G VAHE I+DLR L +AGI+ ED+AKRLMDYGFH PT+SWPVPGTLMIEPTESE+K ELDR C+A+I+IR EIA+IE G +D N LK APHP +L + W PYSRE AAYPA WLR KFWPA R+DN YGDR+L+CT Sbjct: 787 IAKRLEPYYPVLYKGAHGLVAHECILDLRPLKKSAGIEVEDIAKRLMDYGFHAPTVSWPVPGTLMIEPTESETKAELDRFCEAMIAIRSEIAEIEAGVSDRQQNPLKNAPHPALMLATEPWPYPYSREVAAYPAPWLREYKFWPAVARIDNAYGDRHLVCT 947 HSP 2 Score: 45.0542 bits (105), Expect = 2.671e-67 Identity = 21/33 (63.64%), Postives = 25/33 (75.76%), Query Frame = 3 Query: 6 ILPLSYTYIAMMGSKGLTEASKIAILNANYSGK 104 ILP+S+ YI +MG GLT A+ IAILNANY K Sbjct: 757 ILPISWMYITLMGGVGLTRATAIAILNANYIAK 789
BLAST of CF834482 vs. ExPASy Swiss-Prot
Match: GCSP_ANAVT (Glycine dehydrogenase [decarboxylating] OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gcvP PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 7.724e-67 Identity = 103/164 (62.80%), Postives = 127/164 (77.44%), Query Frame = 1 Query: 97 VAKRLEKHYPILFRGVNGTVAHEFIVDLRGLNNTAGIQPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKEELDRDCDALISIREEIAQIENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 588 +AKRLE +YP+L++G NG VAHE I+DLR L +A I+ +D+AKRL+DYGFH PT+SWPV GT+M+EPTESES+ ELDR CDALI+IR+EIA IE GK D HNN+LK APH L+ W PYSRE AAYP SW R KFWP+ GR+D +GDRN +C+ LP Sbjct: 806 IAKRLETYYPVLYKGQNGLVAHECILDLRALKKSANIEIDDIAKRLIDYGFHAPTVSWPVTGTIMVEPTESESQAELDRFCDALIAIRQEIAAIEAGKMDTHNNLLKNAPHTIESLIVGEWLHPYSREQAAYPVSWTREYKFWPSVGRIDAAFGDRNFVCSCLP 969 HSP 2 Score: 47.7506 bits (112), Expect = 7.724e-67 Identity = 22/33 (66.67%), Postives = 28/33 (84.85%), Query Frame = 3 Query: 6 ILPLSYTYIAMMGSKGLTEASKIAILNANYSGK 104 IL +S+ YIAMMG+ GLT+A+K+AILNANY K Sbjct: 776 ILVISWMYIAMMGADGLTQATKVAILNANYIAK 808 The following BLAST results are available for this feature:
BLAST of CF834482 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 333
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834482 ID=CF834482; Name=CF834482; organism=Citrus sinensis; type=EST; length=650bpback to top |